CF504462

Overview
NameCF504462
Unique NameCF504462
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length357
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3352 contig Csv1_Contig3352:20..376. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504462 vs. ExPASy Swiss-Prot
Match: EF2_BETVU (Elongation factor 2 OS=Beta vulgaris PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 9.419e-54
Identity = 97/118 (82.20%), Postives = 107/118 (90.68%), Query Frame = 2
Query:    2 KKWTTKNTGSATCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLQKLGVTMKSEEKDLMGKALMKRVMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDP 355
            KKWTTKN+G+A+CKRGFVQFCYEPIKQII  CMNDQKDKL   + KLG+ MK+EEKDLMG+ LMKRVMQTWLPASSALLEMMI HLPSP+TAQ+YRVENLYEGP+DD YA AIRNCDP
Sbjct:  255 KKWTTKNSGNASCKRGFVQFCYEPIKQIIAACMNDQKDKLLAHVTKLGIQMKTEEKDLMGRPLMKRVMQTWLPASSALLEMMIHHLPSPATAQRYRVENLYEGPMDDVYATAIRNCDP 372          
BLAST of CF504462 vs. ExPASy Swiss-Prot
Match: EF2_CHLKE (Elongation factor 2 OS=Chlorella kessleri PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 3.358e-43
Identity = 82/119 (68.91%), Postives = 97/119 (81.51%), Query Frame = 2
Query:    2 KKWTTKNTGSATCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLQKLGV--TMKSEEKDLMGKALMKRVMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCD 352
            +KWT K+TG+ TCKRGF QF YEPIK +I   MND KDKL+ +L+KL V   +K E+++LMGK LMKRVMQTWLPA  ALLEMMI+HLPSP+ AQKYRV+ LYEGPLDD YA A+RNCD
Sbjct:  255 RKWTKKHTGADTCKRGFCQFIYEPIKTVIEAAMNDNKDKLFDLLKKLNVYSKLKPEDRELMGKPLMKRVMQTWLPAHEALLEMMIWHLPSPAKAQKYRVDVLYEGPLDDTYATAVRNCD 373          
BLAST of CF504462 vs. ExPASy Swiss-Prot
Match: EF2_CAEEL (Elongation factor 2 OS=Caenorhabditis elegans GN=eft-2 PE=2 SV=4)

HSP 1 Score: 129.798 bits (325), Expect = 4.258e-30
Identity = 62/118 (52.54%), Postives = 83/118 (70.34%), Query Frame = 2
Query:    2 KKWTTKNTGSATCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLQKLGVTMKSEEKDLMGKALMKRVMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDP 355
            KKW++  T  +  KRGF QF  +PI  + +  MN +KDK   +++KLG+ + ++EKDL GK LMK  M+ WLPA   +L+M+ FHLPSP TAQKYR+E LYEGP DD+ A AI+ CDP
Sbjct:  269 KKWSSTQTDES--KRGFCQFVLDPIFMVFDAVMNIKKDKTAALVEKLGIKLANDEKDLEGKPLMKVFMRKWLPAGDTMLQMIAFHLPSPVTAQKYRMEMLYEGPHDDEAAVAIKTCDP 384          
BLAST of CF504462 vs. ExPASy Swiss-Prot
Match: EF2_CRYPV (Elongation factor 2 OS=Cryptosporidium parvum PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 1.239e-29
Identity = 67/119 (56.30%), Postives = 82/119 (68.91%), Query Frame = 2
Query:    2 KKWT-TKNTGSATCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLQKLGVTMKSEEKDLMGKALMKRVMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDP 355
            KK+T T+  GS   KR F QF  EPI Q+ ++ MN  K K   ML  LGV +K ++K L+ K L+K+VMQ WL A   LLEM++ HLPSP+ AQKYRVENLYEGP DD+ A  IRNCDP
Sbjct:  249 KKFTKTQEPGS---KRAFCQFIMEPICQLFSSIMNGDKAKYEKMLVNLGVELKGDDKALVDKPLLKKVMQLWLSAGDTLLEMIVTHLPSPAAAQKYRVENLYEGPQDDETAKGIRNCDP 364          
BLAST of CF504462 vs. ExPASy Swiss-Prot
Match: EF2_PICGU (Elongation factor 2 OS=Pichia guilliermondii GN=EFT2 PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 2.113e-29
Identity = 62/120 (51.67%), Postives = 85/120 (70.83%), Query Frame = 2
Query:    2 KKWTTKNTGS--ATCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLQKLGVTMKSEEKDLMGKALMKRVMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDP 355
            KKWT K+  +     +R F  F  +PI ++    MN +KD++  +L+KL + +K+EEK+L GKAL+K VM+ +LPA+ ALLEM++ HLPSP TAQ YR E LYEGP DD++  AIRNCDP
Sbjct:  255 KKWTNKDKDADGKPLERAFNMFVLDPIFRLFAAIMNFKKDEIPTLLEKLEINLKNEEKELEGKALLKVVMRKFLPAADALLEMIVLHLPSPVTAQAYRAETLYEGPSDDEFCTAIRNCDP 374          
BLAST of CF504462 vs. ExPASy Swiss-Prot
Match: EF2_DROME (Elongation factor 2 OS=Drosophila melanogaster GN=Ef2b PE=1 SV=4)

HSP 1 Score: 126.716 bits (317), Expect = 3.604e-29
Identity = 60/118 (50.85%), Postives = 84/118 (71.19%), Query Frame = 2
Query:    2 KKWTTKNTGSATCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLQKLGVTMKSEEKDLMGKALMKRVMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDP 355
            KKW  +    A  KR F  +  +PI ++ +  MN +K+++  +L+K+GVT+K E+KD  GKAL+K VM+TWLPA  ALL+M+  HLPSP  AQKYR+E LYEGP DD+ A A+++CDP
Sbjct:  261 KKWQKQK--EADNKRSFCMYILDPIYKVFDAIMNYKKEEIGTLLEKIGVTLKHEDKDKDGKALLKTVMRTWLPAGEALLQMIAIHLPSPVVAQKYRMEMLYEGPHDDEAAIAVKSCDP 376          
BLAST of CF504462 vs. ExPASy Swiss-Prot
Match: EF2_CANAL (Elongation factor 2 OS=Candida albicans GN=EFT2 PE=1 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 8.029e-29
Identity = 62/120 (51.67%), Postives = 83/120 (69.17%), Query Frame = 2
Query:    2 KKWTTKNTGS--ATCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLQKLGVTMKSEEKDLMGKALMKRVMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDP 355
            KKWT K+  +     +R F  F  +PI ++    MN +KD++  +L+KL + +K +EKDL GKAL+K VM+ +LPA+ ALLEM++ HLPSP TAQ YR E LYEGP DD +  AIRNCDP
Sbjct:  255 KKWTNKDKDADGKPLERAFNMFILDPIFRLFAAIMNFKKDEIPVLLEKLEIQLKGDEKDLEGKALLKVVMRKFLPAADALLEMIVLHLPSPVTAQAYRAETLYEGPSDDPFCTAIRNCDP 374          
BLAST of CF504462 vs. ExPASy Swiss-Prot
Match: EF2_YEAST (Elongation factor 2 OS=Saccharomyces cerevisiae GN=EFT1 PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.049e-28
Identity = 62/120 (51.67%), Postives = 83/120 (69.17%), Query Frame = 2
Query:    2 KKWTTKNTGSA--TCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLQKLGVTMKSEEKDLMGKALMKRVMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDP 355
            KKWT K+T +     +R F  F  +PI ++    MN +KD++  +L+KL + +K +EKDL GKAL+K VM+ +LPA+ ALLEM++ HLPSP TAQ YR E LYEGP DD    AI+NCDP
Sbjct:  255 KKWTNKDTDAEGKPLERAFNMFILDPIFRLFTAIMNFKKDEIPVLLEKLEIVLKGDEKDLEGKALLKVVMRKFLPAADALLEMIVLHLPSPVTAQAYRAEQLYEGPADDANCIAIKNCDP 374          
BLAST of CF504462 vs. ExPASy Swiss-Prot
Match: EF2_SCHPO (Elongation factor 2 OS=Schizosaccharomyces pombe GN=eft1 PE=1 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 1.049e-28
Identity = 61/119 (51.26%), Postives = 86/119 (72.27%), Query Frame = 2
Query:    2 KKWTTKNTGSA--TCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLQKLGVTMKSEEKDLMGKALMKRVMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCD 352
            KKW+   T +   + +R F  F  +PI +I +  MN +KD+++ +L KL VT+K +EK+L GKAL+K VM+ +LPA+ AL+EM++ HLPSP TAQ+YR E LYEGP+DD+ A  IRNCD
Sbjct:  255 KKWSKSATDANGNSNQRAFNMFILDPIYRIFDAVMNSRKDEVFTLLSKLEVTIKPDEKELEGKALLKVVMRKFLPAADALMEMIVLHLPSPKTAQQYRAETLYEGPMDDECAVGIRNCD 373          
BLAST of CF504462 vs. ExPASy Swiss-Prot
Match: EF2_SACKL (Elongation factor 2 OS=Saccharomyces kluyveri GN=EFT2 PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.049e-28
Identity = 63/120 (52.50%), Postives = 83/120 (69.17%), Query Frame = 2
Query:    2 KKWTTKNTGS--ATCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLQKLGVTMKSEEKDLMGKALMKRVMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDP 355
            KKWT K T +     +R F  F  +PI ++ +  MN +KD++  +L+KL + +K EEK+L GKAL+K VM+ +LPA+ ALLEM+I HLPSP TAQ YR E LYEGP DD    AI+NCDP
Sbjct:  255 KKWTNKETDTDGKPLERAFNMFVLDPIFRLFSAIMNFKKDEIPVLLEKLEINLKGEEKELEGKALLKIVMRKFLPAADALLEMIIMHLPSPVTAQNYRAEQLYEGPSDDPACIAIKNCDP 374          
The following BLAST results are available for this feature:
BLAST of CF504462 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
EF2_BETVU9.419e-5482.20Elongation factor 2 OS=Beta vulgaris PE=2 SV=1[more]
EF2_CHLKE3.358e-4368.91Elongation factor 2 OS=Chlorella kessleri PE=2 SV=... [more]
EF2_CAEEL4.258e-3052.54Elongation factor 2 OS=Caenorhabditis elegans GN=e... [more]
EF2_CRYPV1.239e-2956.30Elongation factor 2 OS=Cryptosporidium parvum PE=3... [more]
EF2_PICGU2.113e-2951.67Elongation factor 2 OS=Pichia guilliermondii GN=EF... [more]
EF2_DROME3.604e-2950.85Elongation factor 2 OS=Drosophila melanogaster GN=... [more]
EF2_CANAL8.029e-2951.67Elongation factor 2 OS=Candida albicans GN=EFT2 PE... [more]
EF2_YEAST1.049e-2851.67Elongation factor 2 OS=Saccharomyces cerevisiae GN... [more]
EF2_SCHPO1.049e-2851.26Elongation factor 2 OS=Schizosaccharomyces pombe G... [more]
EF2_SACKL1.049e-2852.50Elongation factor 2 OS=Saccharomyces kluyveri GN=E... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-951 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-18_F02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504462 ID=CF504462; Name=CF504462; organism=Citrus sinensis; type=EST; length=357bp
AAAGAAGTGGACAACCAAGAACACTGGTAGTGCGACATGCAAGCGTGGTT
TTGTTCAGTTTTGCTATGAACCGATTAAGCAGATTATCAACACTTGCATG
AATGATCAGAAAGATAAGCTGTGGCCCATGTTGCAAAAGCTTGGTGTCAC
GATGAAGTCAGAAGAGAAGGATTTGATGGGCAAGGCATTGATGAAGCGTG
TCATGCAGACCTGGCTTCCTGCAAGTAGTGCACTTTTGGAAATGATGATC
TTTCACCTTCCCTCTCCTTCCACGGCCCAAAAATATCGTGTTGAGAACTT
GTATGAGGGTCCTCTTGATGATCAATATGCTAATGCTATTCGGAACTGTG
ATCCTAA
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