CF504466

Overview
NameCF504466
Unique NameCF504466
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length221
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504466 vs. ExPASy Swiss-Prot
Match: WNK1_ORYSJ (Probable serine/threonine-protein kinase WNK1 OS=Oryza sativa subsp. japonica GN=WNK1 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 6.616e-36
Identity = 69/73 (94.52%), Postives = 71/73 (97.26%), Query Frame = 3
Query:    3 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAARCVGTPEFMAPEVYEEEYNELVDIYSFGMCILEMV 221
            P+IHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHA  CVGTPEFMAPEVYEEEYNELVDIYSFGMC+LEMV
Sbjct:  150 PIIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAVHCVGTPEFMAPEVYEEEYNELVDIYSFGMCVLEMV 222          
BLAST of CF504466 vs. ExPASy Swiss-Prot
Match: WNK1_ORYSI (Probable serine/threonine-protein kinase WNK1 OS=Oryza sativa subsp. indica GN=WNK1 PE=2 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 6.616e-36
Identity = 69/73 (94.52%), Postives = 71/73 (97.26%), Query Frame = 3
Query:    3 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAARCVGTPEFMAPEVYEEEYNELVDIYSFGMCILEMV 221
            P+IHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHA  CVGTPEFMAPEVYEEEYNELVDIYSFGMC+LEMV
Sbjct:  150 PIIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAVHCVGTPEFMAPEVYEEEYNELVDIYSFGMCVLEMV 222          
BLAST of CF504466 vs. ExPASy Swiss-Prot
Match: WNK1_ARATH (Serine/threonine-protein kinase WNK1 OS=Arabidopsis thaliana GN=WNK1 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 6.616e-36
Identity = 71/73 (97.26%), Postives = 71/73 (97.26%), Query Frame = 3
Query:    3 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAARCVGTPEFMAPEVYEEEYNELVDIYSFGMCILEMV 221
            PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAA CVGTPEFMAPEVYEE YNELVDIYSFGMCILEMV
Sbjct:  147 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEEAYNELVDIYSFGMCILEMV 219          
BLAST of CF504466 vs. ExPASy Swiss-Prot
Match: WNK2_ARATH (Serine/threonine-protein kinase WNK2 OS=Arabidopsis thaliana GN=WNK2 PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 1.474e-35
Identity = 66/73 (90.41%), Postives = 72/73 (98.63%), Query Frame = 3
Query:    3 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAARCVGTPEFMAPEVYEEEYNELVDIYSFGMCILEMV 221
            P+IHRDLKCDNIF+NGNQGEVKIGDLGLAAILRKSHA RCVGTPEFMAPEVY+EEYNELVD+Y+FGMC+LEMV
Sbjct:  147 PIIHRDLKCDNIFINGNQGEVKIGDLGLAAILRKSHAVRCVGTPEFMAPEVYDEEYNELVDVYAFGMCVLEMV 219          
BLAST of CF504466 vs. ExPASy Swiss-Prot
Match: WNK9_ARATH (Probable serine/threonine-protein kinase WNK9 OS=Arabidopsis thaliana GN=WNK9 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 8.088e-34
Identity = 65/73 (89.04%), Postives = 70/73 (95.89%), Query Frame = 3
Query:    3 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAARCVGTPEFMAPEVYEEEYNELVDIYSFGMCILEMV 221
            PVIHRDLKCDNIF+NGNQGEVKIGDLGLAA L+ SHAA CVGTPEFMAPEVY+EEYN+LVDIYSFGMC+LEMV
Sbjct:  148 PVIHRDLKCDNIFINGNQGEVKIGDLGLAACLQHSHAAHCVGTPEFMAPEVYKEEYNQLVDIYSFGMCVLEMV 220          
BLAST of CF504466 vs. ExPASy Swiss-Prot
Match: WNK3_ORYSJ (Probable serine/threonine-protein kinase WNK3 OS=Oryza sativa subsp. japonica GN=WNK3 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 1.428e-30
Identity = 60/73 (82.19%), Postives = 65/73 (89.04%), Query Frame = 3
Query:    3 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAARCVGTPEFMAPEVYEEEYNELVDIYSFGMCILEMV 221
            P+IHRDLKCDNIFVNGNQGEVKIGDLGLAA  R    ARCVGTPEFMAPEVY+E Y+EL D+YSFGMC+LEMV
Sbjct:  157 PIIHRDLKCDNIFVNGNQGEVKIGDLGLAAFRRGGGHARCVGTPEFMAPEVYDESYDELADVYSFGMCVLEMV 229          
BLAST of CF504466 vs. ExPASy Swiss-Prot
Match: WNK8_ARATH (Serine/threonine-protein kinase WNK8 OS=Arabidopsis thaliana GN=WNK8 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 5.425e-30
Identity = 60/73 (82.19%), Postives = 66/73 (90.41%), Query Frame = 3
Query:    3 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAARCVGTPEFMAPEVYEEEYNELVDIYSFGMCILEMV 221
            PVIHRDLKCDNIFVNGN GEVKIGDLGLA +L++  A   +GTPEFMAPE+YEEEYNELVDIYSFGMC+LEMV
Sbjct:  152 PVIHRDLKCDNIFVNGNTGEVKIGDLGLATVLQQPTARSVIGTPEFMAPELYEEEYNELVDIYSFGMCMLEMV 224          
BLAST of CF504466 vs. ExPASy Swiss-Prot
Match: WNK10_ARATH (Probable serine/threonine-protein kinase WNK10 OS=Arabidopsis thaliana GN=WNK10 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 9.254e-30
Identity = 59/73 (80.82%), Postives = 67/73 (91.78%), Query Frame = 3
Query:    3 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAARCVGTPEFMAPEVYEEEYNELVDIYSFGMCILEMV 221
            PVIHRDLKCDNIFVNGN G+VKIGDLGLAA++++  A   +GTPEFMAPE+YEEEYNELVDIYSFGMC+LEMV
Sbjct:  139 PVIHRDLKCDNIFVNGNTGKVKIGDLGLAAVMQQPTARSVIGTPEFMAPELYEEEYNELVDIYSFGMCMLEMV 211          
BLAST of CF504466 vs. ExPASy Swiss-Prot
Match: WNK3_ARATH (Probable serine/threonine-protein kinase WNK3 OS=Arabidopsis thaliana GN=WNK3 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 5.998e-29
Identity = 59/74 (79.73%), Postives = 68/74 (91.89%), Query Frame = 3
Query:    3 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAARCV-GTPEFMAPEVYEEEYNELVDIYSFGMCILEMV 221
            PVIHRDLKCDNIF+NGNQGEVKIGDLGLAAIL ++ +A  V GTPEFMAPE+YEE+YN LVDIY+FGMC+LE+V
Sbjct:  145 PVIHRDLKCDNIFINGNQGEVKIGDLGLAAILHRARSAHSVIGTPEFMAPELYEEDYNVLVDIYAFGMCLLELV 218          
BLAST of CF504466 vs. ExPASy Swiss-Prot
Match: WNK2_ORYSJ (Probable serine/threonine-protein kinase WNK2 OS=Oryza sativa subsp. japonica GN=WNK2 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 7.834e-29
Identity = 59/74 (79.73%), Postives = 67/74 (90.54%), Query Frame = 3
Query:    3 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAR-CVGTPEFMAPEVYEEEYNELVDIYSFGMCILEMV 221
            PVIHRDLKCDNIFVNGNQGEVKIGDLGLA IL  + +A   +GTPEFMAPE+Y+EEYNELVDIY+FGMC+LE+V
Sbjct:  151 PVIHRDLKCDNIFVNGNQGEVKIGDLGLATILDNARSAHSIIGTPEFMAPELYDEEYNELVDIYAFGMCLLELV 224          
The following BLAST results are available for this feature:
BLAST of CF504466 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
WNK1_ORYSJ6.616e-3694.52Probable serine/threonine-protein kinase WNK1 OS=O... [more]
WNK1_ORYSI6.616e-3694.52Probable serine/threonine-protein kinase WNK1 OS=O... [more]
WNK1_ARATH6.616e-3697.26Serine/threonine-protein kinase WNK1 OS=Arabidopsi... [more]
WNK2_ARATH1.474e-3590.41Serine/threonine-protein kinase WNK2 OS=Arabidopsi... [more]
WNK9_ARATH8.088e-3489.04Probable serine/threonine-protein kinase WNK9 OS=A... [more]
WNK3_ORYSJ1.428e-3082.19Probable serine/threonine-protein kinase WNK3 OS=O... [more]
WNK8_ARATH5.425e-3082.19Serine/threonine-protein kinase WNK8 OS=Arabidopsi... [more]
WNK10_ARATH9.254e-3080.82Probable serine/threonine-protein kinase WNK10 OS=... [more]
WNK3_ARATH5.998e-2979.73Probable serine/threonine-protein kinase WNK3 OS=A... [more]
WNK2_ORYSJ7.834e-2979.73Probable serine/threonine-protein kinase WNK2 OS=O... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-955 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-18_F07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504466 ID=CF504466; Name=CF504466; organism=Citrus sinensis; type=EST; length=221bp
CACCGGTGATTCATAGAGATCTCAAATGTGACAATATTTTTGTCAATGGA
AACCAAGGGGAAGTCAAGATTGGGGATCTTGGCCTTGCTGCAATCCTCCG
CAAATCTCATGCTGCTCGTTGTGTTGGAACGCCAGAGTTTATGGCCCCTG
AAGTGTATGAAGAGGAATACAATGAATTAGTCGATATATACTCTTTCGGA
ATGTGCATCTTGGAGATGGTC
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