CF504487
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504487 vs. ExPASy Swiss-Prot
Match: DUS3L_ORYSJ (tRNA-dihydrouridine synthase 3-like OS=Oryza sativa subsp. japonica GN=Os04g0117600 PE=2 SV=2) HSP 1 Score: 135.961 bits (341), Expect = 1.142e-31 Identity = 80/189 (42.33%), Postives = 102/189 (53.97%), Query Frame = 2 Query: 2 FSHDLDSFKAQKPDDLEGECPFLSSEGPCPYGLACRFSGTHRDVVDVAGSTNTLRKSSEVNGLNKDVQKLLWKNKMKFPKADAKLKSLGLLGPAKSKMKVMEDKEQ------EGVVDSNNSHATN---GNGCMKGTGDSVDESECSPCVPEENNIVNDRPLKKAKSENVENCCSVEGDNAGVSVLEEDT 541 FSHD+D++ AQKP DLEG CPF + + CPYGL CRF GTH+D+ +G+ L + E+N LNKD+QKLLWKNK KFPKA A++K LGL KSK D ++ +G D N N C + +D SE P + V RP KK+K E S E D G L +T Sbjct: 113 FSHDIDAYLAQKPADLEGTCPFTNLDQLCPYGLTCRFLGTHKDIHAASGN---LSEKHEINALNKDIQKLLWKNKYKFPKASAQIKLLGLKEVIKSKPDAANDDKKVNHDNLDGNDDENKEPLCNPPVNAECDSTLCEELDRSEGEPLIDNSIPCVEPRPTKKSKVE------SDEIDKHGAGTLNTNT 292
BLAST of CF504487 vs. ExPASy Swiss-Prot
Match: DUS3L_ARATH (tRNA-dihydrouridine synthase 3-like OS=Arabidopsis thaliana GN=At4g38890 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 2.544e-31 Identity = 82/186 (44.09%), Postives = 114/186 (61.29%), Query Frame = 2 Query: 2 FSHDLDSFKAQKPDDLEGECPFLSSEGPCPYGLACRFSGTHRDVVDVAGSTNTLRKSSEVNGLNKDVQKLLWKNKMKFPKADAKLKSLGLLGPAK---SKMKVMEDKEQEGVVDSNNSHATNGNGCMKGTGDSVDESECSPCVPEENNIVNDRPLKKAKSENVENCCSVEGDNAGV---SVLEEDT 541 F+HD+++FKAQK DD+EG+CPF++S C YGL+CRF G+HR D+ G+++ ++ SE+N NK+ Q+LLWKNKM F ADAKLKSLGLLG AK + ++ +K Q G+ N + AT + + E +P RP+KKAKSE+ +N S GD GV LEE+T Sbjct: 129 FNHDIEAFKAQKADDIEGQCPFVASGMKCAYGLSCRFLGSHR---DITGNSDD-KEKSEMNFFNKETQRLLWKNKMTFTNADAKLKSLGLLGHAKKSNAAEEITAEKTQNGM---NGTQATEVAVDSAVSSEHTSEMIQDVDIPGPLETEEVRPMKKAKSEDQKN--SKTGDVGGVYDGVKLEEET 305 The following BLAST results are available for this feature:
BLAST of CF504487 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF504487 ID=CF504487; Name=CF504487; organism=Citrus sinensis; type=EST; length=541bpback to top |