CF504488

Overview
NameCF504488
Unique NameCF504488
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length358
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13796 contig Csv1_Contig13796:494..851. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504488 vs. ExPASy Swiss-Prot
Match: PER42_ARATH (Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=1 SV=2)

HSP 1 Score: 228.409 bits (581), Expect = 8.796e-60
Identity = 105/118 (88.98%), Postives = 113/118 (95.76%), Query Frame = 3
Query:    3 LKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILD 356
            LKTGRRDG KSR ++LE YLPDHN+S+SVVLE+F +IGID PGLVALLGSHSVGRTHCVKLVHRLYPEVDP+LNPDHVPHMLHKCPD+IPDPKAVQYVRNDRGTPMVLDNNYYRNILD
Sbjct:  147 LKTGRRDGLKSRTDMLESYLPDHNESISVVLEKFKSIGIDTPGLVALLGSHSVGRTHCVKLVHRLYPEVDPSLNPDHVPHMLHKCPDSIPDPKAVQYVRNDRGTPMVLDNNYYRNILD 264          
BLAST of CF504488 vs. ExPASy Swiss-Prot
Match: PER21_ARATH (Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 5.741e-35
Identity = 67/117 (57.26%), Postives = 84/117 (71.79%), Query Frame = 3
Query:    3 LKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNIL 353
            +KTGRRD R S    +E  +P+HNDS+S V+  F +IGID    VALLG+HSVGR HCV LVHRLYP +DP L+P +  ++  +CP   PDP AV Y RNDR TPMV+DN YY+NI+
Sbjct:  147 IKTGRRDSRGSYLGDVETLIPNHNDSLSSVISTFNSIGIDVEATVALLGAHSVGRVHCVNLVHRLYPTIDPTLDPSYALYLKKRCPSPTPDPNAVLYSRNDRETPMVVDNMYYKNIM 263          
BLAST of CF504488 vs. ExPASy Swiss-Prot
Match: PER51_ARATH (Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.621e-13
Identity = 42/121 (34.71%), Postives = 63/121 (52.07%), Query Frame = 3
Query:    3 LKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNI 350
            ++ GRRDG  S A  +   LP     ++ +   FA  G+    ++AL G+H++G  HC K+ +RLY       VDP +N D+V  +   CP  I DP+    +  D  TP   DN YY+N+
Sbjct:  147 VELGRRDGLSSSASSVTGKLPKPTFDLNQLNALFAENGLSPNDMIALSGAHTLGFAHCTKVFNRLYNFNKTNNVDPTINKDYVTELKASCPQNI-DPRVA--INMDPNTPRQFDNVYYKNL 264          
BLAST of CF504488 vs. ExPASy Swiss-Prot
Match: PER50_ARATH (Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.067e-13
Identity = 41/121 (33.88%), Postives = 64/121 (52.89%), Query Frame = 3
Query:    3 LKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNI 350
            ++ GR DG  S A  +   LP   D ++ +   FA  G+    ++AL G+H++G  HC K+ +R+Y      +VDP +N D+V  +   CP  I DP+    +  D  TP   DN YY+N+
Sbjct:  147 VELGRLDGLSSTAASVGGKLPHPTDDVNKLTSLFAKNGLSLNDMIALSGAHTLGFAHCTKVFNRIYTFNKTTKVDPTVNKDYVTELKASCPRNI-DPRVA--INMDPTTPRQFDNVYYKNL 264          
BLAST of CF504488 vs. ExPASy Swiss-Prot
Match: PER2_ARAHY (Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.919e-12
Identity = 41/119 (34.45%), Postives = 64/119 (53.78%), Query Frame = 3
Query:    9 TGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNI 350
            TGRRDGR S+A  +   LP  +DS+ V  ++FAA G++   LV L+G H++G + C    +RL+        DPA++P  V ++   CP    +  A   V  D G+    D +Y+ N+
Sbjct:  147 TGRRDGRVSQASDVSN-LPAPSDSVDVQKQKFAAKGLNTQDLVTLVGGHTIGTSECQFFSNRLFNFNGTAAADPAIDPSFVSNLQALCPQ---NTGAANRVALDTGSQFKFDTSYFSNL 261          
BLAST of CF504488 vs. ExPASy Swiss-Prot
Match: PER63_ARATH (Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.521e-11
Identity = 36/116 (31.03%), Postives = 62/116 (53.45%), Query Frame = 3
Query:    3 LKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNI 350
            +  GRRD R S++ ++   LP  +  +S ++++F++ G     +VAL G+H++G +HC +  +R+ P      NP     +   C ++  DP     V ND  TP   DN Y++NI
Sbjct:  150 ISLGRRDSRTSKSSLVSDLLPLPSMQISKLIDQFSSRGFSVQEMVALSGAHTIGFSHCKEFTNRVNPNNSTGYNPRFAVALKKACSNSKNDPTI--SVFNDVMTPNKFDNMYFQNI 263          
BLAST of CF504488 vs. ExPASy Swiss-Prot
Match: PER25_ARATH (Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 1.521e-11
Identity = 41/121 (33.88%), Postives = 65/121 (53.72%), Query Frame = 3
Query:    9 TGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILD 356
            TGR+DGR S A      LP   DS++V  ++F   G+D   LV LLG+H++G+T C+   +RLY        DP ++P  +  +   CP   P+    + V  D G+P   D ++++N+ D
Sbjct:  144 TGRKDGRISLATEASN-LPSPLDSVAVQKQKFQDKGLDTHDLVTLLGAHTIGQTDCLFFRYRLYNFTVTGNSDPTISPSFLTQLKTLCP---PNGDGSKRVALDIGSPSKFDESFFKNLRD 260          
BLAST of CF504488 vs. ExPASy Swiss-Prot
Match: PER55_ARATH (Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.987e-11
Identity = 38/122 (31.15%), Postives = 69/122 (56.56%), Query Frame = 3
Query:    3 LKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRL-----YPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNIL 353
            ++ GRRDG  S+A  +   LP+    +  +++ FA+ G+    ++AL G+H++G +HC +  +RL     +  VDP ++P +   ++  C D  P+P AV  V  D  +    DN+YY+N++
Sbjct:  149 VELGRRDGLVSKASRVTGKLPEPGLDVRGLVQIFASNGLSLTDMIALSGAHTIGSSHCNRFANRLHNFSTFMPVDPTMDPVYAQQLIQACSD--PNPDAV--VDIDLTSRDTFDNSYYQNLV 266          
BLAST of CF504488 vs. ExPASy Swiss-Prot
Match: PER41_ARATH (Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.389e-11
Identity = 38/116 (32.76%), Postives = 62/116 (53.45%), Query Frame = 3
Query:    3 LKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNI 350
            +K GR+DG +S+A  ++  LP  N S+  +L  F   G     LVAL G H++G +HC +  +R++P+VDP LN      +   C +   +     ++  D  TP   DN Y++N+
Sbjct:  144 VKLGRKDGFESKAHKVKGNLPLANQSVPDMLSIFKKNGFTLKELVALSGGHTIGFSHCKEFSNRIFPKVDPELNAKFAGVLKDLCKNFETNKTMAAFL--DPVTPGKFDNMYFKNL 257          
BLAST of CF504488 vs. ExPASy Swiss-Prot
Match: PER48_ARATH (Putative Peroxidase 48 OS=Arabidopsis thaliana GN=PER48 PE=2 SV=3)

HSP 1 Score: 65.855 bits (159), Expect = 7.550e-11
Identity = 34/94 (36.17%), Postives = 54/94 (57.45%), Query Frame = 3
Query:    3 LKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAI 269
            L+TGR+D   +  +  E  LP  + ++SV+L+RF+  G +    V+L G+HS+G THC    +RLY      + DP LNP  +  +  KCP ++
Sbjct:  184 LETGRKDSAAAYRDFAEHELPAPDATLSVILQRFSFRGFNERETVSLFGAHSIGITHCTFFKNRLYNFSATGKPDPELNPGFLQELKTKCPFSV 277          
The following BLAST results are available for this feature:
BLAST of CF504488 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
PER42_ARATH8.796e-6088.98Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=... [more]
PER21_ARATH5.741e-3557.26Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=... [more]
PER51_ARATH3.621e-1334.71Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=... [more]
PER50_ARATH8.067e-1333.88Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=... [more]
PER2_ARAHY8.919e-1234.45Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 ... [more]
PER63_ARATH1.521e-1131.03Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=... [more]
PER25_ARATH1.521e-1133.88Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=... [more]
PER55_ARATH1.987e-1131.15Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=... [more]
PER41_ARATH3.389e-1132.76Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=... [more]
PER48_ARATH7.550e-1136.17Putative Peroxidase 48 OS=Arabidopsis thaliana GN=... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-977 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-18_H06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504488 ID=CF504488; Name=CF504488; organism=Citrus sinensis; type=EST; length=358bp
CTCTCAAGACAGGAAGAAGAGATGGTAGAAAAAGCAGAGCAGAGATACTT
GAGCAGTATCTCCCAGATCACAACGACAGCATGTCTGTTGTTCTTGAGAG
GTTTGCAGCCATTGGCATTGACGCCCCTGGACTTGTTGCTCTGCTAGGAT
CTCACAGTGTTGGCAGAACTCATTGTGTGAAGCTGGTGCACCGTCTGTAC
CCAGAAGTTGACCCTGCACTGAACCCTGACCATGTTCCGCATATGCTCCA
TAAGTGTCCTGATGCAATCCCAGACCCCAAGGCTGTTCAGTATGTGAGGA
ATGACCGTGGCACACCCATGGTGCTGGACAACAACTACTATAGGAACATA
TTGGACAA
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