CF504498

Overview
NameCF504498
Unique NameCF504498
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length399
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2445 contig Csv1_Contig2445:52..451. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF504498 vs. ExPASy Swiss-Prot
Match: PLST4_ARATH (Plastidic glucose transporter 4 OS=Arabidopsis thaliana GN=At5g16150 PE=1 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 3.898e-21
Identity = 45/51 (88.24%), Postives = 47/51 (92.16%), Query Frame = -2 
Query:  201 IGLYFLSVVNKFGISTVYLGFATVCLLAVLYIAINVVETKGRSLEEIERAL 353
            IGLYFLSVV KFGIS+VYLGFA VC+LAVLYIA NVVETKGRSLEEIE AL
Sbjct:  492 IGLYFLSVVTKFGISSVYLGFAGVCVLAVLYIAGNVVETKGRSLEEIELAL 542

HSP 2 Score: 34.6538 bits (78), Expect = 3.898e-21
Identity = 15/15 (100.00%), Postives = 15/15 (100.00%), Query Frame = -3 
Query:  353 AVALSLGMHWISNFV 397
            AVALSLGMHWISNFV
Sbjct:  477 AVALSLGMHWISNFV 491
The following BLAST results are available for this feature:
BLAST of CF504498 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PLST4_ARATH3.898e-2188.24Plastidic glucose transporter 4 OS=Arabidopsis tha... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-987 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-19_A05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504498 ID=CF504498; Name=CF504498; organism=Citrus sinensis; type=EST; length=399bp
AACGAAAGTTGGTTGGGTTTCAAATCTGTGCAAAACAGACCAAAATGAGA
ATCAGCAAACGAGATAGTCCGGGAGATAGAATAAAGAAGGAAAGCTCTAC
AGAAGAAAATTGTCTTGCTTATTCAAGGTCAGTGTCCACGAGCCGCAGGG
AGATTATTACCCACCCACTTCTACCATTTTCAGTATCAAACTACTGGATT
GAGAGCACGCTCTATCTCCTCCAATGATCTTCCCTTTGTTTCTACAACAT
TAATGGCTATGTACAAGACGGCAAGGAGACAGACGGTTGCAAATCCCAAA
TACACTGTACTGATTCCAAACTTGTTTACAACGCTCAAGAAGTACAGTCC
GATACAAAGTTTGAGATCCAATGCATGCCTAATGACAAAGCAACCGCTT
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