CF504503

Overview
NameCF504503
Unique NameCF504503
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length472
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3352 contig Csv1_Contig3352:219..690. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504503 vs. ExPASy Swiss-Prot
Match: EF2_BETVU (Elongation factor 2 OS=Beta vulgaris PE=2 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 8.703e-82
Identity = 144/157 (91.72%), Postives = 152/157 (96.82%), Query Frame = 1
Query:    1 VMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHP 471
            VMQTWLPASSALLEMMI HLPSP+TAQ+YRVENLYEGP+DD YA AIRNCDP GPLMLYVSKMIPASDKGRFFAFGRVF+GKVSTG+KVRIMGPNYVPGEKKDLYVK+VQRTVIWMGKKQETVEDVPCGNTVA+VGLDQ+ITKNATLTNEKE DAHP
Sbjct:  321 VMQTWLPASSALLEMMIHHLPSPATAQRYRVENLYEGPMDDVYATAIRNCDPEGPLMLYVSKMIPASDKGRFFAFGRVFAGKVSTGMKVRIMGPNYVPGEKKDLYVKNVQRTVIWMGKKQETVEDVPCGNTVALVGLDQYITKNATLTNEKESDAHP 477          
BLAST of CF504503 vs. ExPASy Swiss-Prot
Match: EF2_CHLKE (Elongation factor 2 OS=Chlorella kessleri PE=2 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 2.375e-71
Identity = 126/156 (80.77%), Postives = 144/156 (92.31%), Query Frame = 1
Query:    1 VMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAH 468
            VMQTWLPA  ALLEMMI+HLPSP+ AQKYRV+ LYEGPLDD YA A+RNCD +GPLM+YVSKMIPA+DKGRF+AFGRVFSG+++TG KVRIMGPNYVPG+KKDLYVK+VQRTV+ MG++QE VEDVPCGNTVA+VGLDQFITKNATLT+EK  DAH
Sbjct:  323 VMQTWLPAHEALLEMMIWHLPSPAKAQKYRVDVLYEGPLDDTYATAVRNCDADGPLMMYVSKMIPAADKGRFYAFGRVFSGRIATGRKVRIMGPNYVPGQKKDLYVKTVQRTVLCMGRRQEAVEDVPCGNTVALVGLDQFITKNATLTDEKCEDAH 478          
BLAST of CF504503 vs. ExPASy Swiss-Prot
Match: EF2_RAT (Elongation factor 2 OS=Rattus norvegicus GN=Eef2 PE=1 SV=4)

HSP 1 Score: 221.09 bits (562), Expect = 1.952e-57
Identity = 100/148 (67.57%), Postives = 122/148 (82.43%), Query Frame = 1
Query:    1 VMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLT 444
            VM+ WLPA  ALL+M+  HLPSP TAQKYR E LYEGP DD+ A  I++CDP GPLM+Y+SKM+P SDKGRF+AFGRVFSG VSTGLKVRIMGPNY PG+K+DLY+K +QRT++ MG+  E +EDVPCGN V +VG+DQF+ K  T+T
Sbjct:  339 VMRRWLPAGDALLQMITIHLPSPVTAQKYRCELLYEGPPDDEAAMGIKSCDPKGPLMMYISKMVPTSDKGRFYAFGRVFSGVVSTGLKVRIMGPNYTPGKKEDLYLKPIQRTILMMGRYVEPIEDVPCGNIVGLVGVDQFLVKTGTIT 486          
BLAST of CF504503 vs. ExPASy Swiss-Prot
Match: EF2_PONAB (Elongation factor 2 OS=Pongo abelii GN=EEF2 PE=2 SV=3)

HSP 1 Score: 221.09 bits (562), Expect = 1.952e-57
Identity = 100/148 (67.57%), Postives = 122/148 (82.43%), Query Frame = 1
Query:    1 VMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLT 444
            VM+ WLPA  ALL+M+  HLPSP TAQKYR E LYEGP DD+ A  I++CDP GPLM+Y+SKM+P SDKGRF+AFGRVFSG VSTGLKVRIMGPNY PG+K+DLY+K +QRT++ MG+  E +EDVPCGN V +VG+DQF+ K  T+T
Sbjct:  339 VMRRWLPAGDALLQMITIHLPSPVTAQKYRCELLYEGPPDDEAAMGIKSCDPKGPLMMYISKMVPTSDKGRFYAFGRVFSGLVSTGLKVRIMGPNYTPGKKEDLYLKPIQRTILMMGRYVEPIEDVPCGNIVGLVGVDQFLVKTGTIT 486          
BLAST of CF504503 vs. ExPASy Swiss-Prot
Match: EF2_MOUSE (Elongation factor 2 OS=Mus musculus GN=Eef2 PE=1 SV=2)

HSP 1 Score: 221.09 bits (562), Expect = 1.952e-57
Identity = 100/148 (67.57%), Postives = 122/148 (82.43%), Query Frame = 1
Query:    1 VMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLT 444
            VM+ WLPA  ALL+M+  HLPSP TAQKYR E LYEGP DD+ A  I++CDP GPLM+Y+SKM+P SDKGRF+AFGRVFSG VSTGLKVRIMGPNY PG+K+DLY+K +QRT++ MG+  E +EDVPCGN V +VG+DQF+ K  T+T
Sbjct:  339 VMRRWLPAGDALLQMITIHLPSPVTAQKYRCELLYEGPPDDEAAMGIKSCDPKGPLMMYISKMVPTSDKGRFYAFGRVFSGVVSTGLKVRIMGPNYTPGKKEDLYLKPIQRTILMMGRYVEPIEDVPCGNIVGLVGVDQFLVKTGTIT 486          
BLAST of CF504503 vs. ExPASy Swiss-Prot
Match: EF2_HUMAN (Elongation factor 2 OS=Homo sapiens GN=EEF2 PE=1 SV=4)

HSP 1 Score: 221.09 bits (562), Expect = 1.952e-57
Identity = 100/148 (67.57%), Postives = 122/148 (82.43%), Query Frame = 1
Query:    1 VMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLT 444
            VM+ WLPA  ALL+M+  HLPSP TAQKYR E LYEGP DD+ A  I++CDP GPLM+Y+SKM+P SDKGRF+AFGRVFSG VSTGLKVRIMGPNY PG+K+DLY+K +QRT++ MG+  E +EDVPCGN V +VG+DQF+ K  T+T
Sbjct:  339 VMRRWLPAGDALLQMITIHLPSPVTAQKYRCELLYEGPPDDEAAMGIKSCDPKGPLMMYISKMVPTSDKGRFYAFGRVFSGLVSTGLKVRIMGPNYTPGKKEDLYLKPIQRTILMMGRYVEPIEDVPCGNIVGLVGVDQFLVKTGTIT 486          
BLAST of CF504503 vs. ExPASy Swiss-Prot
Match: EF2_CRIGR (Elongation factor 2 OS=Cricetulus griseus GN=EEF2 PE=3 SV=3)

HSP 1 Score: 221.09 bits (562), Expect = 1.952e-57
Identity = 100/148 (67.57%), Postives = 122/148 (82.43%), Query Frame = 1
Query:    1 VMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLT 444
            VM+ WLPA  ALL+M+  HLPSP TAQKYR E LYEGP DD+ A  I++CDP GPLM+Y+SKM+P SDKGRF+AFGRVFSG VSTGLKVRIMGPNY PG+K+DLY+K +QRT++ MG+  E +EDVPCGN V +VG+DQF+ K  T+T
Sbjct:  339 VMRRWLPAGDALLQMITIHLPSPVTAQKYRCELLYEGPPDDEAAMGIKSCDPKGPLMMYISKMVPTSDKGRFYAFGRVFSGVVSTGLKVRIMGPNYTPGKKEDLYLKPIQRTILMMGRYVEPIEDVPCGNIVGLVGVDQFLVKTGTIT 486          
BLAST of CF504503 vs. ExPASy Swiss-Prot
Match: EF2_CALJA (Elongation factor 2 OS=Callithrix jacchus GN=EEF2 PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 1.952e-57
Identity = 100/148 (67.57%), Postives = 122/148 (82.43%), Query Frame = 1
Query:    1 VMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLT 444
            VM+ WLPA  ALL+M+  HLPSP TAQKYR E LYEGP DD+ A  I++CDP GPLM+Y+SKM+P SDKGRF+AFGRVFSG VSTGLKVRIMGPNY PG+K+DLY+K +QRT++ MG+  E +EDVPCGN V +VG+DQF+ K  T+T
Sbjct:  339 VMRRWLPAGDALLQMITIHLPSPVTAQKYRCELLYEGPPDDEAAMGIKSCDPKGPLMMYISKMVPTSDKGRFYAFGRVFSGLVSTGLKVRIMGPNYTPGKKEDLYLKPIQRTILMMGRYVEPIEDVPCGNIVGLVGVDQFLVKTGTIT 486          
BLAST of CF504503 vs. ExPASy Swiss-Prot
Match: EF2_BOVIN (Elongation factor 2 OS=Bos taurus GN=EEF2 PE=2 SV=3)

HSP 1 Score: 221.09 bits (562), Expect = 1.952e-57
Identity = 100/148 (67.57%), Postives = 122/148 (82.43%), Query Frame = 1
Query:    1 VMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLT 444
            VM+ WLPA  ALL+M+  HLPSP TAQKYR E LYEGP DD+ A  I++CDP GPLM+Y+SKM+P SDKGRF+AFGRVFSG VSTGLKVRIMGPNY PG+K+DLY+K +QRT++ MG+  E +EDVPCGN V +VG+DQF+ K  T+T
Sbjct:  339 VMRRWLPAGDALLQMITIHLPSPVTAQKYRCELLYEGPPDDEAAMGIKSCDPKGPLMMYISKMVPTSDKGRFYAFGRVFSGLVSTGLKVRIMGPNYTPGKKEDLYLKPIQRTILMMGRYVEPIEDVPCGNIVGLVGVDQFLVKTGTIT 486          
BLAST of CF504503 vs. ExPASy Swiss-Prot
Match: EF2_MESAU (Elongation factor 2 OS=Mesocricetus auratus GN=EEF2 PE=2 SV=3)

HSP 1 Score: 219.55 bits (558), Expect = 5.680e-57
Identity = 99/148 (66.89%), Postives = 122/148 (82.43%), Query Frame = 1
Query:    1 VMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLT 444
            VM+ WLPA  ALL+M+  HLPSP TAQKYR E LYEGP DD+ A  I++CDP GPLM+Y+SKM+P SDKGRF+AFGRVFSG VSTGLKVRIMGPNY PG+K++LY+K +QRT++ MG+  E +EDVPCGN V +VG+DQF+ K  T+T
Sbjct:  339 VMRRWLPAGDALLQMITIHLPSPVTAQKYRCELLYEGPPDDEAAMGIKSCDPKGPLMMYISKMVPTSDKGRFYAFGRVFSGVVSTGLKVRIMGPNYTPGKKEELYLKPIQRTILMMGRYVEPIEDVPCGNIVGLVGVDQFLVKTGTIT 486          
The following BLAST results are available for this feature:
BLAST of CF504503 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
EF2_BETVU8.703e-8291.72Elongation factor 2 OS=Beta vulgaris PE=2 SV=1[more]
EF2_CHLKE2.375e-7180.77Elongation factor 2 OS=Chlorella kessleri PE=2 SV=... [more]
EF2_RAT1.952e-5767.57Elongation factor 2 OS=Rattus norvegicus GN=Eef2 P... [more]
EF2_PONAB1.952e-5767.57Elongation factor 2 OS=Pongo abelii GN=EEF2 PE=2 S... [more]
EF2_MOUSE1.952e-5767.57Elongation factor 2 OS=Mus musculus GN=Eef2 PE=1 S... [more]
EF2_HUMAN1.952e-5767.57Elongation factor 2 OS=Homo sapiens GN=EEF2 PE=1 S... [more]
EF2_CRIGR1.952e-5767.57Elongation factor 2 OS=Cricetulus griseus GN=EEF2 ... [more]
EF2_CALJA1.952e-5767.57Elongation factor 2 OS=Callithrix jacchus GN=EEF2 ... [more]
EF2_BOVIN1.952e-5767.57Elongation factor 2 OS=Bos taurus GN=EEF2 PE=2 SV=... [more]
EF2_MESAU5.680e-5766.89Elongation factor 2 OS=Mesocricetus auratus GN=EEF... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-992 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-19_A10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504503 ID=CF504503; Name=CF504503; organism=Citrus sinensis; type=EST; length=472bp
GTCATGCAGACCTGGCTTCCTGCAAGTAGTGCACTTTTGGAAATGATGAT
CTTTCACCTTCCCTCTCCTTCCACGGCCCAAAAATATCGTGTTGAGAACT
TGTATGAGGGTCCTCTTGATGATCAATATGCTAATGCTATTCGGAACTGT
GATCCTAATGGTCCTCTTATGCTCTATGTATCTAAGATGATTCCTGCATC
TGATAAGGGTAGGTTCTTTGCTTTCGGTCGTGTGTTTTCTGGTAAGGTGT
CAACAGGTTTGAAGGTCAGGATCATGGGTCCAAACTATGTTCCTGGTGAG
AAGAAAGATTTGTATGTTAAGAGCGTCCAAAGGACTGTTATTTGGATGGG
AAAGAAGCAGGAAACCGTTGAGGATGTGCCTTGTGGTAACACTGTGGCTA
TGGTTGGTCTCGATCAATTCATCACTAAAAATGCTACCTTGACTAATGAG
AAGGAAGTTGATGCCCATCCCA
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