CF504506

Overview
NameCF504506
Unique NameCF504506
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length355
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11756 contig Csv1_Contig11756:29..382. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504506 vs. ExPASy Swiss-Prot
Match: DFRA_PETHY (Dihydroflavonol-4-reductase OS=Petunia hybrida GN=DFRA PE=2 SV=2)

HSP 1 Score: 63.929 bits (154), Expect = 3.912e-14
Identity = 32/71 (45.07%), Postives = 42/71 (59.15%), Query Frame = 2
Query:   32 VCVTGGSGCIGSWLVRLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQXXXXXXXXXXXXVTGC 244
            VCVTG +G IGSWLV  LLER Y VHATV++  ++++  HL  L  ADT L L++            + GC
Sbjct:   18 VCVTGAAGFIGSWLVMRLLERGYNVHATVRDPENKKKVKHLLELPKADTNLTLWKADLTVEGSFDEAIQGC 88          

HSP 2 Score: 33.113 bits (74), Expect = 3.912e-14
Identity = 12/33 (36.36%), Postives = 25/33 (75.76%), Query Frame = 3
Query:  249 GVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVL 347
            GVFH+A+P   +  +DP+N+++ P V+G ++++
Sbjct:   90 GVFHVATPMDFES-KDPENEVIKPTVRGMLSII 121          
BLAST of CF504506 vs. ExPASy Swiss-Prot
Match: DFRA_SOLLC (Dihydroflavonol-4-reductase OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 1.114e-13
Identity = 32/71 (45.07%), Postives = 42/71 (59.15%), Query Frame = 2
Query:   32 VCVTGGSGCIGSWLVRLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQXXXXXXXXXXXXVTGC 244
            V VTGG+G IGSWLV  LLER Y VHATV++  ++++  HL  L  ADT L L++            + GC
Sbjct:   20 VWVTGGAGFIGSWLVMRLLERGYNVHATVRDPENQKKVKHLLELPKADTNLTLWKADLAVEGSFDEAIQGC 90          

HSP 2 Score: 33.113 bits (74), Expect = 1.114e-13
Identity = 12/33 (36.36%), Postives = 25/33 (75.76%), Query Frame = 3
Query:  249 GVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVL 347
            GVFH+A+P   +  +DP+N+++ P V+G ++++
Sbjct:   92 GVFHVATPMDFES-KDPENEVIKPTVRGMLSII 123          
BLAST of CF504506 vs. ExPASy Swiss-Prot
Match: DFRA_VITVI (Dihydroflavonol-4-reductase OS=Vitis vinifera GN=DFR PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.987e-11
Identity = 35/79 (44.30%), Postives = 47/79 (59.49%), Query Frame = 2
Query:   11 MSKEAEVVCVTGGSGCIGSWLVRLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQXXXXXXXXXXXXVTGCT 247
            M  ++E VCVTG SG IGSWLV  LLERR TV ATV++ ++ ++  HL  L  A+T L L++            + GCT
Sbjct:    1 MGSQSETVCVTGASGFIGSWLVMRLLERRLTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCT 79          
BLAST of CF504506 vs. ExPASy Swiss-Prot
Match: DFRA_PYRCO (Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Pyrus communis GN=DFR PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.426e-11
Identity = 34/79 (43.04%), Postives = 47/79 (59.49%), Query Frame = 2
Query:   11 MSKEAEVVCVTGGSGCIGSWLVRLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQXXXXXXXXXXXXVTGCT 247
            M  E+E VCVTG SG IGSWLV  LLE  YTV ATV++ +++++  HL  L  A+T L L++            + GC+
Sbjct:    1 MGSESESVCVTGASGFIGSWLVMRLLEHGYTVRATVRDPTNQKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIQGCS 79          
BLAST of CF504506 vs. ExPASy Swiss-Prot
Match: DFRA_MALDO (Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Malus domestica GN=DFR PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.426e-11
Identity = 34/79 (43.04%), Postives = 47/79 (59.49%), Query Frame = 2
Query:   11 MSKEAEVVCVTGGSGCIGSWLVRLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQXXXXXXXXXXXXVTGCT 247
            M  E+E VCVTG SG IGSWLV  LLE  YTV ATV++ +++++  HL  L  A+T L L++            + GC+
Sbjct:    1 MGSESESVCVTGASGFIGSWLVMRLLEHGYTVRATVRDPTNQKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIQGCS 79          
BLAST of CF504506 vs. ExPASy Swiss-Prot
Match: DFRA_DIACA (Dihydroflavonol-4-reductase OS=Dianthus caryophyllus GN=A PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.861e-11
Identity = 34/76 (44.74%), Postives = 43/76 (56.58%), Query Frame = 2
Query:   20 EAEVVCVTGGSGCIGSWLVRLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQXXXXXXXXXXXXVTGCT 247
            + E VCVTG SG IGSWL+  LLER YTV ATV++  + ++  HL  L  A T L L++            V GCT
Sbjct:   21 QGETVCVTGASGFIGSWLIMRLLERGYTVRATVRDPDNTKKVQHLLDLPNAKTNLTLWKADLHEEGSFDAAVDGCT 96          
The following BLAST results are available for this feature:
BLAST of CF504506 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
DFRA_PETHY3.912e-1445.07Dihydroflavonol-4-reductase OS=Petunia hybrida GN=... [more]
DFRA_SOLLC1.114e-1345.07Dihydroflavonol-4-reductase OS=Solanum lycopersicu... [more]
DFRA_VITVI1.987e-1144.30Dihydroflavonol-4-reductase OS=Vitis vinifera GN=D... [more]
DFRA_PYRCO4.426e-1143.04Bifunctional dihydroflavonol 4-reductase/flavanone... [more]
DFRA_MALDO4.426e-1143.04Bifunctional dihydroflavonol 4-reductase/flavanone... [more]
DFRA_DIACA9.861e-1144.74Dihydroflavonol-4-reductase OS=Dianthus caryophyll... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-995 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-19_B01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504506 ID=CF504506; Name=CF504506; organism=Citrus sinensis; type=EST; length=355bp
GATAGAGAAAATGTCCAAAGAAGCTGAGGTGGTTTGCGTCACCGGCGGCA
GCGGCTGCATCGGCTCCTGGCTGGTCCGTCTCCTTCTCGAACGCCGCTAC
ACTGTTCACGCCACTGTCAAAAATCTCAGTGATGAAAGAGAAACAGCTCA
TCTCAAAGCGCTAGAAGGAGCTGACACGCGTCTCCGTCTCTTCCAAATCG
ACCTCCTCGATTACGACGCCATCGCCGCCGCGGTCACCGGCTGTACCTGG
TGTCTTCCACTTGGCCTCACCTTGCATTGTCGACAAAGTCGAAGATCCTC
AGAACCAGCTTTTGAATCCCGCGGTTAAAGGAACCGTTAACGTACTCACC
GCAGC
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