CF504526
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504526 vs. ExPASy Swiss-Prot
Match: PTHC_ARATH (Peptidyl-tRNA hydrolase, chloroplastic OS=Arabidopsis thaliana GN=At1g18440 PE=2 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 1.943e-19 Identity = 45/59 (76.27%), Postives = 52/59 (88.14%), Query Frame = 3 Query: 120 KPKQQQ-QHPWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGL 293 KPK Q PWLIVGLGNPGK+Y GTRHNVGFEMVDA+A+AEGIS+++VNFKA FGKG+ Sbjct: 85 KPKSPPLQLPWLIVGLGNPGKKYQGTRHNVGFEMVDALADAEGISMNTVNFKALFGKGV 143
BLAST of CF504526 vs. ExPASy Swiss-Prot
Match: PTHM_ORYSJ (Peptidyl-tRNA hydrolase, mitochondrial OS=Oryza sativa subsp. japonica GN=Os01g0693900 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 6.910e-17 Identity = 39/49 (79.59%), Postives = 42/49 (85.71%), Query Frame = 3 Query: 144 PWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKG 290 PWL VGLGNPGK Y GTRHNVGFEM+D IAEAEGIS+SS+ FKA GKG Sbjct: 55 PWLFVGLGNPGKVYQGTRHNVGFEMIDVIAEAEGISLSSMQFKAMVGKG 103
BLAST of CF504526 vs. ExPASy Swiss-Prot
Match: PTHM_ARATH (Peptidyl-tRNA hydrolase, mitochondrial OS=Arabidopsis thaliana GN=At5g19830 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.593e-13 Identity = 31/49 (63.27%), Postives = 39/49 (79.59%), Query Frame = 3 Query: 144 PWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKG 290 PWL +GLGNPG +Y GTRHN+GFEM+D AE+ GI ++ VNFKA G+G Sbjct: 18 PWLFLGLGNPGDKYKGTRHNIGFEMIDVFAESVGIQMNLVNFKAIMGQG 66
BLAST of CF504526 vs. ExPASy Swiss-Prot
Match: CRS2_ORYSJ (Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0132800 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.054e-13 Identity = 32/58 (55.17%), Postives = 42/58 (72.41%), Query Frame = 3 Query: 117 PKPKQQQQHPWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKG 290 P + + PWLI GLGNPG +Y+GTRHNVGFEMVD IA EGI+++++ K+ G G Sbjct: 55 PAARPAEYTPWLIAGLGNPGSKYHGTRHNVGFEMVDRIARDEGITMNTIQSKSLLGIG 112
BLAST of CF504526 vs. ExPASy Swiss-Prot
Match: CRS2L_ORYSJ (CRS2-like protein, chloroplastic OS=Oryza sativa subsp. japonica GN=Os03g0347800 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.033e-12 Identity = 30/51 (58.82%), Postives = 42/51 (82.35%), Query Frame = 3 Query: 141 HPWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGL 293 +PWL VGLGNPG++Y TRHNVGF+M+D A+++GIS++ FKA FG+G+ Sbjct: 59 NPWLFVGLGNPGEKYQCTRHNVGFDMIDMFAQSQGISLTRHPFKALFGEGM 109
BLAST of CF504526 vs. ExPASy Swiss-Prot
Match: CRS2B_ARATH (Chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic OS=Arabidopsis thaliana GN=CRS2B PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.033e-12 Identity = 30/49 (61.22%), Postives = 39/49 (79.59%), Query Frame = 3 Query: 144 PWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKG 290 PWLIVGLGNPG +Y+GTRHNVGFEM+D +A EG+ ++++ KA G G Sbjct: 45 PWLIVGLGNPGNKYHGTRHNVGFEMIDVLARKEGVLMNTIQSKALIGIG 93
BLAST of CF504526 vs. ExPASy Swiss-Prot
Match: CRS2_MAIZE (Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic OS=Zea mays GN=CRS2 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.924e-12 Identity = 31/49 (63.27%), Postives = 38/49 (77.55%), Query Frame = 3 Query: 144 PWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKG 290 PWLI GLGNPG +Y GTRHNVGFEMVD IA EGI+++++ K+ G G Sbjct: 61 PWLIAGLGNPGNKYYGTRHNVGFEMVDRIAAEEGITMNTIQSKSLLGIG 109
BLAST of CF504526 vs. ExPASy Swiss-Prot
Match: CRS2A_ARATH (Chloroplastic group IIB intron splicing facilitator CRS2-A, chloroplastic OS=Arabidopsis thaliana GN=CRS2A PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.742e-12 Identity = 31/49 (63.27%), Postives = 38/49 (77.55%), Query Frame = 3 Query: 144 PWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKG 290 PWLIVGLGNPG +Y GTRHN+GFEM+D IA A IS++++ KA G G Sbjct: 51 PWLIVGLGNPGLKYYGTRHNIGFEMIDHIARATDISMNTIQSKALVGIG 99
BLAST of CF504526 vs. ExPASy Swiss-Prot
Match: PTH_THETN (Peptidyl-tRNA hydrolase OS=Thermoanaerobacter tengcongensis GN=pth PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.543e-11 Identity = 34/82 (41.46%), Postives = 51/82 (62.20%), Query Frame = 3 Query: 147 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGLFH-----------FLN-------DSINYFKLAL 338 ++I GLGNPGK+Y GTRHNVGF ++DA+++ GI VS + FK+ G+G F F+N D++N++K+ L Sbjct: 2 YIIAGLGNPGKEYEGTRHNVGFMVIDALSKKLGIEVSRLKFKSLMGEGHFKGEKVILLKPQTFMNLSGEALYDAVNFYKIPL 83 The following BLAST results are available for this feature:
BLAST of CF504526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF504526 ID=CF504526; Name=CF504526; organism=Citrus sinensis; type=EST; length=398bpback to top |