CF504528

Overview
NameCF504528
Unique NameCF504528
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length309
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3696 contig Csv1_Contig3696:348..656. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504528 vs. ExPASy Swiss-Prot
Match: PIP_ARATH (Proline iminopeptidase OS=Arabidopsis thaliana GN=PIP PE=2 SV=3)

HSP 1 Score: 197.593 bits (501), Expect = 1.638e-50
Identity = 89/99 (89.90%), Postives = 96/99 (96.97%), Query Frame = 1
Query:   13 FAQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSQAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRD 309
            F QRGAGKSTPHACL++NTTWDL++DIEKLR+HL+IPEW VFGGSWGSTLALAYSQ+HPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWE FRD
Sbjct:  128 FDQRGAGKSTPHACLEENTTWDLVNDIEKLREHLKIPEWLVFGGSWGSTLALAYSQSHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWEEFRD 226          
BLAST of CF504528 vs. ExPASy Swiss-Prot
Match: PIP_PLEBO (Probable proline iminopeptidase OS=Plectonema boryanum GN=pip PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 3.204e-38
Identity = 71/97 (73.20%), Postives = 81/97 (83.51%), Query Frame = 1
Query:   13 FAQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSQAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESF 303
            F QRGAGKSTPHA L +NTTWDL+ DIEKLR HL I  W VFGGSWGSTL+LAYSQ HPD+  GL+LRGIFLLR+KEI WFY+ GA+ I+PDAWE +
Sbjct:   66 FDQRGAGKSTPHAELRENTTWDLVSDIEKLRSHLNIDRWFVFGGSWGSTLSLAYSQTHPDRCLGLILRGIFLLRRKEILWFYQDGASWIFPDAWEHY 162          
BLAST of CF504528 vs. ExPASy Swiss-Prot
Match: PIP_XYLFA (Proline iminopeptidase OS=Xylella fastidiosa GN=pip PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 4.330e-35
Identity = 65/97 (67.01%), Postives = 80/97 (82.47%), Query Frame = 1
Query:   13 FAQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSQAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESF 303
            F QRGAG+STPHA L  NTTWDL+ DIEKLR  L I  WQVFGGSWGSTLALAY+Q HP++ T LVLRGIF+LR+ E++WFY+ GA+ ++PDAW+ +
Sbjct:   66 FDQRGAGRSTPHANLTNNTTWDLVADIEKLRVALGITRWQVFGGSWGSTLALAYAQTHPEQTTELVLRGIFMLRRWELEWFYQEGASHLFPDAWDRY 162          
BLAST of CF504528 vs. ExPASy Swiss-Prot
Match: PIP_XYLFT (Proline iminopeptidase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=pip PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 1.646e-34
Identity = 64/97 (65.98%), Postives = 79/97 (81.44%), Query Frame = 1
Query:   13 FAQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSQAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESF 303
            F QRGAG+S PHA L  NTTWDL+ DIEKLR  L I  WQVFGGSWGSTLALAY+Q HP++ T LVLRGIF+LR+ E++WFY+ GA+ ++PDAW+ +
Sbjct:   66 FDQRGAGRSMPHANLTNNTTWDLVADIEKLRVALGITRWQVFGGSWGSTLALAYAQTHPEQTTELVLRGIFMLRRWELEWFYQEGASRLFPDAWDRY 162          
BLAST of CF504528 vs. ExPASy Swiss-Prot
Match: PIP_XANCI (Proline iminopeptidase OS=Xanthomonas campestris pv. citri GN=pip PE=1 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 3.794e-31
Identity = 61/97 (62.89%), Postives = 75/97 (77.32%), Query Frame = 1
Query:   13 FAQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSQAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESF 303
            F QRG+G+STPHA L  NTTWDL+ DIE+LR HL +  WQVFGGSWGSTLALAY+         LVLRGIFLLR+ E++WFY+ GA+ ++PDAWE +
Sbjct:   66 FDQRGSGRSTPHADLVDNTTWDLVADIERLRTHLGVDRWQVFGGSWGSTLALAYAADPSAAGHQLVLRGIFLLRRFELEWFYQEGASRLFPDAWEHY 162          
BLAST of CF504528 vs. ExPASy Swiss-Prot
Match: PIP_SERMA (Proline iminopeptidase OS=Serratia marcescens GN=pip PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 3.794e-31
Identity = 56/95 (58.95%), Postives = 74/95 (77.89%), Query Frame = 1
Query:   13 FAQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSQAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWE 297
            F QRG G+S PHA LD NTTW L+ DIE+LR+   + +W VFGGSWGSTLALAY+Q HP++V+ +VLRGIF LRK+ + W+Y+ GA+  +P+ WE
Sbjct:   69 FDQRGCGRSRPHASLDNNTTWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQRLHWYYQDGASRFFPEKWE 163          
BLAST of CF504528 vs. ExPASy Swiss-Prot
Match: PIP_NEIMB (Proline iminopeptidase OS=Neisseria meningitidis serogroup B GN=pip PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 2.459e-30
Identity = 59/96 (61.46%), Postives = 73/96 (76.04%), Query Frame = 1
Query:   19 QRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSQAHPDKVTGLVLRGIFLLRKKEIDWFYE-GGAAAIYPDAWESF 303
            QRG G+S P+AC + NTTWDL+ DIEK+R+ L I +W VFGGSWGSTL+LAY+Q HP++V GLVLRGIFL R  E  W  E GG + IYP+ W+ F
Sbjct:   65 QRGCGRSRPYACAEDNTTWDLVADIEKVREMLGIGKWLVFGGSWGSTLSLAYAQTHPERVKGLVLRGIFLCRPSETVWLNEAGGVSRIYPEQWQKF 160          
BLAST of CF504528 vs. ExPASy Swiss-Prot
Match: PIP_NEIMA (Proline iminopeptidase OS=Neisseria meningitidis serogroup A GN=pip PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 2.459e-30
Identity = 59/96 (61.46%), Postives = 73/96 (76.04%), Query Frame = 1
Query:   19 QRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSQAHPDKVTGLVLRGIFLLRKKEIDWFYE-GGAAAIYPDAWESF 303
            QRG G+S P+AC + NTTWDL+ DIEK+R+ L I +W VFGGSWGSTL+LAY+Q HP++V GLVLRGIFL R  E  W  E GG + IYP+ W+ F
Sbjct:   65 QRGCGRSRPYACAEDNTTWDLVADIEKVREMLGIGKWLVFGGSWGSTLSLAYAQTHPERVKGLVLRGIFLCRPSETVWLNEAGGVSRIYPEQWQKF 160          
BLAST of CF504528 vs. ExPASy Swiss-Prot
Match: PIP_NEIGO (Proline iminopeptidase OS=Neisseria gonorrhoeae GN=pip PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 2.459e-30
Identity = 59/96 (61.46%), Postives = 73/96 (76.04%), Query Frame = 1
Query:   19 QRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSQAHPDKVTGLVLRGIFLLRKKEIDWFYE-GGAAAIYPDAWESF 303
            QRG G+S P+AC + NTTWDL+ DIEK+R+ L I +W VFGGSWGSTL+LAY+Q HP++V GLVLRGIFL R  E  W  E GG + IYP+ W+ F
Sbjct:   65 QRGCGRSHPYACAEDNTTWDLVADIEKVREMLGIGKWLVFGGSWGSTLSLAYAQTHPERVKGLVLRGIFLCRPSETAWLNEAGGVSRIYPEQWQKF 160          
BLAST of CF504528 vs. ExPASy Swiss-Prot
Match: PIP_MYCPN (Putative proline iminopeptidase OS=Mycoplasma pneumoniae GN=pip PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.003e-15
Identity = 42/78 (53.85%), Postives = 51/78 (65.38%), Query Frame = 1
Query:   19 QRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSQAHPDKVTGLVLRGIFLLRKKEIDW 252
            QRG G+S     L  NTT DL+ D+E LRQHL++  W +FGGSWGSTLAL Y+  HP  V  + LR +FL R  E DW
Sbjct:   63 QRGCGQSKAVNPLLHNTTQDLVGDLEALRQHLKLERWTLFGGSWGSTLALVYAITHPQVVEQVFLRALFLGR--EQDW 138          
The following BLAST results are available for this feature:
BLAST of CF504528 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
PIP_ARATH1.638e-5089.90Proline iminopeptidase OS=Arabidopsis thaliana GN=... [more]
PIP_PLEBO3.204e-3873.20Probable proline iminopeptidase OS=Plectonema bory... [more]
PIP_XYLFA4.330e-3567.01Proline iminopeptidase OS=Xylella fastidiosa GN=pi... [more]
PIP_XYLFT1.646e-3465.98Proline iminopeptidase OS=Xylella fastidiosa (stra... [more]
PIP_XANCI3.794e-3162.89Proline iminopeptidase OS=Xanthomonas campestris p... [more]
PIP_SERMA3.794e-3158.95Proline iminopeptidase OS=Serratia marcescens GN=p... [more]
PIP_NEIMB2.459e-3061.46Proline iminopeptidase OS=Neisseria meningitidis s... [more]
PIP_NEIMA2.459e-3061.46Proline iminopeptidase OS=Neisseria meningitidis s... [more]
PIP_NEIGO2.459e-3061.46Proline iminopeptidase OS=Neisseria gonorrhoeae GN... [more]
PIP_MYCPN1.003e-1553.85Putative proline iminopeptidase OS=Mycoplasma pneu... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-017 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-19_D01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504528 ID=CF504528; Name=CF504528; organism=Citrus sinensis; type=EST; length=309bp
TTGGGCTGCAGGTTTGCCCAGCGAGGTGCAGGAAAAAGTACCCCTCATGC
TTGCTTGGATCAAAACACCACATGGGATCTCATTGATGACATTGAAAAGT
TGAGACAACACCTAGAAATTCCAGAATGGCAGGTATTTGGTGGATCATGG
GGAAGCACACTTGCTCTTGCATACAGCCAGGCACACCCCGACAAGGTTAC
TGGCTTGGTCCTCAGGGGGATCTTTCTTTTGCGAAAGAAAGAGATTGATT
GGTTTTATGAGGGTGGTGCTGCTGCTATATACCCTGATGCATGGGAGTCA
TTCAGAGAC
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