CF504537

Overview
NameCF504537
Unique NameCF504537
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length484
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9906 contig Csv1_Contig9906:876..1359. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504537 vs. ExPASy Swiss-Prot
Match: COMT1_ZINEL (Caffeic acid 3-O-methyltransferase OS=Zinnia elegans PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 1.434e-42
Identity = 77/138 (55.80%), Postives = 105/138 (76.09%), Query Frame = 2
Query:    2 KGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 415
            KGINFD+PHVI DA++Y G+EHVGGDM++ +P+GDAI MKW+LH++ D +C+++L+NCYK+LP +GKV+V    LPE PD+T A+++   +D I L   P G+ERT+KEF ALA  AGFKG N      N++VMEF K
Sbjct:  217 KGINFDLPHVIADATTYQGIEHVGGDMFESVPKGDAIFMKWILHDWSDAHCLQVLKNCYKSLPENGKVIVAECILPEAPDTTPATQNVIHIDVIMLAHNPGGKERTEKEFEALAKGAGFKGFNKAACALNTWVMEFCK 354          
BLAST of CF504537 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 1.434e-42
Identity = 77/138 (55.80%), Postives = 102/138 (73.91%), Query Frame = 2
Query:    2 KGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 415
            KGINFD+PHVI+DA SYPG+EHVGGDM+  IP+ DA+ MKW+ H++ DE+C+K L+NCY+ALP++GKV+V    LP  PDS+ A++    +D I L   P G+ERT+KEF  LA  AGF+G    CN  N+Y+MEF K
Sbjct:  226 KGINFDLPHVIEDAPSYPGVEHVGGDMFVSIPKADAVFMKWICHDWSDEHCLKFLKNCYEALPDNGKVIVAECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTQKEFEDLAKGAGFQGFKVHCNAFNTYIMEFLK 363          
BLAST of CF504537 vs. ExPASy Swiss-Prot
Match: COMT1_CLABR (Caffeic acid 3-O-methyltransferase OS=Clarkia breweri GN=COMT PE=1 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 1.434e-42
Identity = 80/138 (57.97%), Postives = 100/138 (72.46%), Query Frame = 2
Query:    2 KGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 415
            KGINFD+PHVI+DA  YPG+EHVGGDM+  +P+GDAI MKW+ H++ DE+C+K L+NCY ALP  GKV+V    LP  PD + A++    +DAI L   P G+ERT+KEF ALAI AGFKG    C   N+YVMEF K
Sbjct:  231 KGINFDLPHVIEDAPIYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPEHGKVIVAECILPLSPDPSLATKGVIHIDAIMLAHNPGGKERTEKEFEALAIGAGFKGFKVACCAFNTYVMEFLK 368          
BLAST of CF504537 vs. ExPASy Swiss-Prot
Match: OMT2_CHRAE (Quercetin 3-O-methyltransferase 2 OS=Chrysosplenium americanum GN=OMT2 PE=1 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 2.446e-42
Identity = 76/136 (55.88%), Postives = 103/136 (75.74%), Query Frame = 2
Query:    8 INFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 415
            INFD+PHVI+DA  YPG+EHVGGDM+  +P+GDAI MKW+ H++ DE+C+K+L+NCY ALPN+GKV++    LPEVPDS+ A++    +D I +   P G+ERT+KEF ALA  AGF+G    CN  N+Y++EF K
Sbjct:  204 INFDLPHVIEDAPEYPGIEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKLLKNCYDALPNNGKVILAECILPEVPDSSLATKGVVHIDVITVAHNPGGKERTEKEFEALAKAAGFQGFQVFCNAFNTYIIEFSK 339          
BLAST of CF504537 vs. ExPASy Swiss-Prot
Match: OMT1_CHRAE (Quercetin 3-O-methyltransferase 1 OS=Chrysosplenium americanum GN=OMT1 PE=1 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 2.446e-42
Identity = 76/136 (55.88%), Postives = 103/136 (75.74%), Query Frame = 2
Query:    8 INFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 415
            INFD+PHVI+DA  YPG+EHVGGDM+  +P+GDAI MKW+ H++ DE+C+K+L+NCY ALPN+GKV++    LPEVPDS+ A++    +D I +   P G+ERT+KEF ALA  AGF+G    CN  N+Y++EF K
Sbjct:  204 INFDLPHVIEDAPEYPGIEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKLLKNCYDALPNNGKVILAECILPEVPDSSLATKGVVHIDVITVAHNPGGKERTEKEFEALAKAAGFQGFQVFCNAFNTYIIEFSK 339          
BLAST of CF504537 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 9.294e-42
Identity = 76/138 (55.07%), Postives = 103/138 (74.64%), Query Frame = 2
Query:    2 KGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 415
            KGINFD+PHVI+DA  YPG+EHVGGDM+  +P+GDAI MKW+ H++ DE+C+K L+NCY ALP++GKV++    LP  PDS+ A++    +D I L   P G+ERT++EF ALA  AGF+G N  C+  N+YV+EF K
Sbjct:  226 KGINFDLPHVIEDAPQYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPDNGKVILGECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTEQEFQALAKGAGFQGFNVACSAFNTYVIEFLK 363          
BLAST of CF504537 vs. ExPASy Swiss-Prot
Match: COMT1_OCIBA (Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 4.613e-41
Identity = 75/138 (54.35%), Postives = 100/138 (72.46%), Query Frame = 2
Query:    2 KGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 415
            KGINFD+PHVI+DA SYPG+EHVGGDM+  +P+GDAI MKW+ H++ DE+C+K L+NCY ALP +GKV++    LPE PD+  A+++   +D I L   P G+ERT+KEF  LA  AGFK  N  C   N+++ME  K
Sbjct:  224 KGINFDLPHVIEDAPSYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCVKFLKNCYDALPQNGKVILAECVLPEAPDTGLATKNVVHIDVIMLAHNPGGKERTEKEFQGLAKAAGFKQFNKACCAYNTWIMELLK 361          
BLAST of CF504537 vs. ExPASy Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 6.024e-41
Identity = 73/138 (52.90%), Postives = 103/138 (74.64%), Query Frame = 2
Query:    2 KGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 415
            KGINFD+PHVI+DA  YPG++HVGGDM+  +P+GDAI MKW+ H++ DE+C+K L+NCY ALP++GKV++    LP  PD++ A++    +D + L   P G+ERT++EF ALA  +GF+GI   CN  N+YV+EF K
Sbjct:  226 KGINFDLPHVIEDAPQYPGVQHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPDNGKVILGECILPVAPDTSLATKGVVHIDVVMLAHNPGGKERTEQEFEALAKGSGFQGIRVACNAFNTYVIEFLK 363          
BLAST of CF504537 vs. ExPASy Swiss-Prot
Match: COMT1_CATRO (Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 1.753e-40
Identity = 74/138 (53.62%), Postives = 103/138 (74.64%), Query Frame = 2
Query:    2 KGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 415
            KGINFD+PHVI+DA SYPG++HVGGDM+  +P+GDAI MKW+ H++ D +C+K L+NC++ALP +GKV++    LPE PDST +++++  +D I L   P G+ERT+KEF ALA  AGF+G    C   NS++ME  K
Sbjct:  226 KGINFDLPHVIEDAPSYPGVDHVGGDMFVSVPKGDAIFMKWICHDWSDAHCLKFLKNCHEALPENGKVILAECLLPEAPDSTLSTQNTVHVDVIMLAHNPGGKERTEKEFEALAKGAGFRGFIKVCCAYNSWIMELLK 363          
BLAST of CF504537 vs. ExPASy Swiss-Prot
Match: OMT1_ARATH (Quercetin 3-O-methyltransferase 1 OS=Arabidopsis thaliana GN=OMT1 PE=1 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 3.905e-40
Identity = 73/138 (52.90%), Postives = 101/138 (73.19%), Query Frame = 2
Query:    2 KGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 415
            KGINFD+PHVI+DA S+PG+EHVGGDM+  +P+GDAI MKW+ H++ DE+C+K L+NCY++LP DGKV++    LPE PDS+ +++    +D I L   P G+ERT+KEF ALA  +GFKGI   C+     ++E  K
Sbjct:  224 KGINFDLPHVIEDAPSHPGIEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCVKFLKNCYESLPEDGKVILAECILPETPDSSLSTKQVVHVDCIMLAHNPGGKERTEKEFEALAKASGFKGIKVVCDAFGVNLIELLK 361          
The following BLAST results are available for this feature:
BLAST of CF504537 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
COMT1_ZINEL1.434e-4255.80Caffeic acid 3-O-methyltransferase OS=Zinnia elega... [more]
COMT1_MEDSA1.434e-4255.80Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]
COMT1_CLABR1.434e-4257.97Caffeic acid 3-O-methyltransferase OS=Clarkia brew... [more]
OMT2_CHRAE2.446e-4255.88Quercetin 3-O-methyltransferase 2 OS=Chrysospleniu... [more]
OMT1_CHRAE2.446e-4255.88Quercetin 3-O-methyltransferase 1 OS=Chrysospleniu... [more]
COMT1_PRUDU9.294e-4255.07Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]
COMT1_OCIBA4.613e-4154.35Caffeic acid 3-O-methyltransferase 1 OS=Ocimum bas... [more]
COMT1_ROSCH6.024e-4152.90Caffeic acid 3-O-methyltransferase OS=Rosa chinens... [more]
COMT1_CATRO1.753e-4053.62Caffeic acid 3-O-methyltransferase OS=Catharanthus... [more]
OMT1_ARATH3.905e-4052.90Quercetin 3-O-methyltransferase 1 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-026 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-19_D10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504537 ID=CF504537; Name=CF504537; organism=Citrus sinensis; type=EST; length=484bp
TAAGGGTATTAATTTTGACGTACCTCATGTTATAAAAGATGCCTCATCTT
ATCCCGGCATGGAACATGTTGGCGGAGATATGTACCAAAAAATTCCAGAG
GGGGATGCCATTTTAATGAAGTGGATGCTTCATAATTTTGATGATGAGAA
TTGCATAAAGATACTGAGGAATTGTTACAAAGCTCTTCCAAATGATGGAA
AGGTACTTGTTATTAACTCAACGTTGCCAGAAGTGCCTGACAGTACCGAG
GCTTCAAGGGATTCCTTCATTTTAGATGCAATTTTTTTAATCCAAATTCC
TCATGGAAGGGAGCGGACCAAAAAGGAGTTCACTGCATTGGCAATCGAAG
CTGGATTTAAGGGTATCAACTTTGAATGTAACGTTTGCAATTCCTATGTC
ATGGAATTCTACAAGTAACTTTGAAGCTAGATTGCTTCATTCTTTCTTTA
TCAGAAAGATGCATCTTCTCAATTTTAATTTGGA
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