CF504548

Overview
NameCF504548
Unique NameCF504548
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length399
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504548 vs. ExPASy Swiss-Prot
Match: PER70_MAIZE (Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 9.560e-35
Identity = 75/118 (63.56%), Postives = 88/118 (74.58%), Query Frame = 1
Query:   46 VVLILAFAATAFSTLSPCYYDKVCPEALPTIKRIVEAAVEKEGRMGASLLRLHFHDCFVQGCDASILLDDTSTIDSEKNAIPNNNSVRGFEVIDQIKKEVDKVCKRPVVSCADILAVA 399
            V+L LA AA A + LSP +Y + CP AL TIK  V AAV +E RMGASLLRLHFHDCFVQGCD S+LL+DT+T   E+ A PN  S+RGF V+D IK +V+ VC   VVSCADILAVA
Sbjct:   13 VLLCLAAAAVASAQLSPTFYSRSCPRALATIKAAVTAAVAQEARMGASLLRLHFHDCFVQGCDGSVLLNDTATFTGEQTANPNVGSIRGFGVVDNIKAQVEAVCP-GVVSCADILAVA 129          
BLAST of CF504548 vs. ExPASy Swiss-Prot
Match: PER1_ARAHY (Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 PE=1 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 3.075e-33
Identity = 72/117 (61.54%), Postives = 83/117 (70.94%), Query Frame = 1
Query:   49 VLILAFAATAFSTLSPCYYDKVCPEALPTIKRIVEAAVEKEGRMGASLLRLHFHDCFVQGCDASILLDDTSTIDSEKNAIPNNNSVRGFEVIDQIKKEVDKVCKRPVVSCADILAVA 399
            ++ +       + LS  +Y   CP AL TIK  V +AV KE RMGASLLRLHFHDCFVQGCDAS+LLDDTS    EK A PN NS+RGFEVID IK +V+ +C   VVSCADILAVA
Sbjct:   11 LIFMCLIGLGSAQLSSNFYATKCPNALSTIKSAVNSAVAKEARMGASLLRLHFHDCFVQGCDASVLLDDTSNFTGEKTAGPNANSIRGFEVIDTIKSQVESLCP-GVVSCADILAVA 126          
BLAST of CF504548 vs. ExPASy Swiss-Prot
Match: PER5_ARATH (Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=2 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 1.526e-32
Identity = 69/123 (56.10%), Postives = 91/123 (73.98%), Query Frame = 1
Query:   31 RGIFHVVLILAFAATAFSTLSPCYYDKVCPEALPTIKRIVEAAVEKEGRMGASLLRLHFHDCFVQGCDASILLDDTSTIDSEKNAIPNNNSVRGFEVIDQIKKEVDKVCKRPVVSCADILAVA 399
            R +  +V I+  ++   + LSP +YD+ C  AL  I+  V  A+ +E RM ASL+R+HFHDCFV GCDASILL+ TSTI+SE++A+PN  SVRGFEVID+ K EV+KVC   +VSCADI+AVA
Sbjct:    7 RFVLMMVSIILTSSICQAQLSPTFYDQSCRNALSKIRSSVRTAIARERRMAASLIRMHFHDCFVHGCDASILLEGTSTIESERDALPNFKSVRGFEVIDKAKSEVEKVCP-GIVSCADIIAVA 128          
BLAST of CF504548 vs. ExPASy Swiss-Prot
Match: PER4_VITVI (Peroxidase 4 OS=Vitis vinifera GN=GSVIVT00023967001 PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 2.603e-32
Identity = 66/116 (56.90%), Postives = 85/116 (73.28%), Query Frame = 1
Query:   52 LILAFAATAFSTLSPCYYDKVCPEALPTIKRIVEAAVEKEGRMGASLLRLHFHDCFVQGCDASILLDDTSTIDSEKNAIPNNNSVRGFEVIDQIKKEVDKVCKRPVVSCADILAVA 399
            ++  FA ++ + LS  +Y K CP+   T+K  V++AV KE RMGASLLRL FHDCFV GCDAS+LLDDTS+   E+ A+PN NS+RG  VID IK +V+ VC   VVSCADI+A+A
Sbjct:   15 VLALFAGSSSAQLSTNFYSKTCPKVFDTVKSGVQSAVSKERRMGASLLRLFFHDCFVNGCDASVLLDDTSSFTGEQTAVPNKNSIRGLNVIDNIKSQVESVCP-GVVSCADIIAIA 129          
BLAST of CF504548 vs. ExPASy Swiss-Prot
Match: PER9_ARATH (Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 4.441e-32
Identity = 67/107 (62.62%), Postives = 84/107 (78.50%), Query Frame = 1
Query:   79 FSTLSPCYYDKVCPEALPTIKRIVEAAVEKEGRMGASLLRLHFHDCFVQGCDASILLDDTSTIDSEKNAIPNNNSVRGFEVIDQIKKEVDKVCKRPVVSCADILAVA 399
            +S L P +Y   CP+A   +  ++E A+ KE RM ASLLRLHFHDCFVQGCDASILLDD++TI SEKNA PN NSVRGF+VID+IK ++++ C +  VSCADILA+A
Sbjct:   42 YSNLYPQFYQFSCPQADEIVMTVLEKAIAKEPRMAASLLRLHFHDCFVQGCDASILLDDSATIRSEKNAGPNKNSVRGFQVIDEIKAKLEQACPQ-TVSCADILALA 147          
BLAST of CF504548 vs. ExPASy Swiss-Prot
Match: PERX_NICSY (Lignin-forming anionic peroxidase OS=Nicotiana sylvestris PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.292e-31
Identity = 67/116 (57.76%), Postives = 82/116 (70.69%), Query Frame = 1
Query:   52 LILAFAATAFSTLSPCYYDKVCPEALPTIKRIVEAAVEKEGRMGASLLRLHFHDCFVQGCDASILLDDTSTIDSEKNAIPNNNSVRGFEVIDQIKKEVDKVCKRPVVSCADILAVA 399
            L+L       + LS  +YD  CP AL TI+  V  A+  E RM ASL+RLHFHDCFVQGCDASILLD+T +I+SEK A+PN  S RGF +I+  K+EV+K+C   VVSCADIL VA
Sbjct:   17 LLLLSCMQCHAQLSATFYDNTCPNALNTIRTSVRQAISSERRMAASLIRLHFHDCFVQGCDASILLDETPSIESEKTALPNLGSARGFGIIEDAKREVEKICP-GVVSCADILTVA 131          
BLAST of CF504548 vs. ExPASy Swiss-Prot
Match: PER68_ARATH (Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 1.094e-30
Identity = 70/123 (56.91%), Postives = 86/123 (69.92%), Query Frame = 1
Query:   31 RGIFHVVL-ILAFAATAFSTLSPCYYDKVCPEALPTIKRIVEAAVEKEGRMGASLLRLHFHDCFVQGCDASILLDDTSTIDSEKNAIPNNNSVRGFEVIDQIKKEVDKVCKRPVVSCADILAV 396
            R  F V+L I+   + A + L   +Y   CP  LPT++R+V+  V KE R+ ASLLRL FHDCFV GCDASILLDDT +   EK A PNNNSVRG+EVID IK  V+++C   VVSCADILA+
Sbjct:   10 RAAFVVLLFIVMLGSQAQAQLRTDFYSDSCPSLLPTVRRVVQREVAKERRIAASLLRLFFHDCFVNGCDASILLDDTRSFLGEKTAGPNNNSVRGYEVIDAIKSRVERLCP-GVVSCADILAI 131          
BLAST of CF504548 vs. ExPASy Swiss-Prot
Match: PER1_HORVU (Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 1.429e-30
Identity = 70/126 (55.56%), Postives = 86/126 (68.25%), Query Frame = 1
Query:   22 MAYRGIFHVVLILAFAATAFSTLSPCYYDKVCPEALPTIKRIVEAAVEKEGRMGASLLRLHFHDCFVQGCDASILLDDTSTIDSEKNAIPNNNSVRGFEVIDQIKKEVDKVCKRPVVSCADILAVA 399
            MA      +++++A    A + LSP +YD  CP AL TIK  V AAV  + RMGASLLRLHFHDCFVQGCDAS+LL        E+NAIPN  S+RGF VID IK +++ +CK+  VSCADIL VA
Sbjct:    1 MASSSYTSLLVLVALVTAASAQLSPTFYDTSCPRALATIKSGVMAAVTSDPRMGASLLRLHFHDCFVQGCDASVLLS-----GMEQNAIPNAGSLRGFGVIDSIKTQIEAICKQ-TVSCADILTVA 120          
BLAST of CF504548 vs. ExPASy Swiss-Prot
Match: PER4_ARATH (Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 5.429e-30
Identity = 63/118 (53.39%), Postives = 85/118 (72.03%), Query Frame = 1
Query:   46 VVLILAFAATAFSTLSPCYYDKVCPEALPTIKRIVEAAVEKEGRMGASLLRLHFHDCFVQGCDASILLDDTSTIDSEKNAIPNNNSVRGFEVIDQIKKEVDKVCKRPVVSCADILAVA 399
            +VL+L+    + + LSP +YD+ C  AL TI+  +  A+ +E RM ASL+RLHFHDCFV GCDAS++L  T T++SE++++ N  S RGFEVIDQ K  V+ VC   VVSCADI+AVA
Sbjct:    7 LVLLLSLCCFSQAQLSPTFYDQTCQNALSTIRSSIRTAISRERRMAASLIRLHFHDCFVNGCDASVMLVATPTMESERDSLANFQSARGFEVIDQAKSAVESVCP-GVVSCADIIAVA 123          
BLAST of CF504548 vs. ExPASy Swiss-Prot
Match: PER52_ARATH (Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 2.063e-29
Identity = 63/104 (60.58%), Postives = 74/104 (71.15%), Query Frame = 1
Query:   88 LSPCYYDKVCPEALPTIKRIVEAAVEKEGRMGASLLRLHFHDCFVQGCDASILLDDTSTIDSEKNAIPNNNSVRGFEVIDQIKKEVDKVCKRPVVSCADILAVA 399
            L+  +Y   CP  L T++  V++AV  E RMGAS+LRL FHDCFV GCD SILLDDTS+   E+NA PN NS RGF VID IK  V+K C   VVSCADILA+A
Sbjct:   30 LTTNFYSTSCPNLLSTVQTAVKSAVNSEARMGASILRLFFHDCFVNGCDGSILLDDTSSFTGEQNAAPNRNSARGFNVIDNIKSAVEKACP-GVVSCADILAIA 132          
The following BLAST results are available for this feature:
BLAST of CF504548 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 105
Match NameE-valueIdentityDescription
PER70_MAIZE9.560e-3563.56Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1[more]
PER1_ARAHY3.075e-3361.54Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 ... [more]
PER5_ARATH1.526e-3256.10Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=2 ... [more]
PER4_VITVI2.603e-3256.90Peroxidase 4 OS=Vitis vinifera GN=GSVIVT0002396700... [more]
PER9_ARATH4.441e-3262.62Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 ... [more]
PERX_NICSY1.292e-3157.76Lignin-forming anionic peroxidase OS=Nicotiana syl... [more]
PER68_ARATH1.094e-3056.91Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=... [more]
PER1_HORVU1.429e-3055.56Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1[more]
PER4_ARATH5.429e-3053.39Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 ... [more]
PER52_ARATH2.063e-2960.58Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-037 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-19_E11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504548 ID=CF504548; Name=CF504548; organism=Citrus sinensis; type=EST; length=399bp
ACTAATTAGTGCAAATTAGTCATGGCTTATAGAGGCATATTTCATGTCGT
TCTCATTTTGGCTTTTGCAGCTACAGCTTTCTCAACCCTTTCTCCTTGCT
ACTATGATAAAGTTTGTCCCGAAGCTTTGCCAACAATCAAACGAATAGTT
GAAGCCGCTGTGGAAAAAGAAGGCCGCATGGGTGCTTCCTTACTTCGTCT
CCACTTCCATGATTGTTTTGTTCAAGGTTGTGATGCCTCCATTCTTCTTG
ATGACACGTCCACCATTGATAGTGAAAAGAATGCAATTCCAAATAATAAT
TCCGTTAGAGGATTCGAGGTCATCGACCAGATAAAGAAAGAGGTCGACAA
AGTTTGCAAACGCCCAGTTGTTTCTTGTGCAGATATCTTGGCTGTAGCA
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