CF504561
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504561 vs. ExPASy Swiss-Prot
Match: LAX1_ARATH (Auxin transporter-like protein 1 OS=Arabidopsis thaliana GN=LAX1 PE=1 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 3.768e-39 Identity = 75/82 (91.46%), Postives = 80/82 (97.56%), Query Frame = 3 Query: 3 VTHSGPSTLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKSIYLLATLYVFTLTIPSAAAVYWAFGDQLLTHSNAFSLL 248 VTHSGP+ LVLYFTGATNILYTFGGHAVTVEIMHAMWKP+KFKSIYL+ATLYVFTLT+PSA+AVYWAFGDQLL HSNAFSLL Sbjct: 230 VTHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPRKFKSIYLMATLYVFTLTLPSASAVYWAFGDQLLNHSNAFSLL 311
BLAST of CF504561 vs. ExPASy Swiss-Prot
Match: LAX2_ORYSJ (Auxin transporter-like protein 2 OS=Oryza sativa subsp. japonica GN=Os05g0447200 PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 1.870e-38 Identity = 74/82 (90.24%), Postives = 79/82 (96.34%), Query Frame = 3 Query: 3 VTHSGPSTLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKSIYLLATLYVFTLTIPSAAAVYWAFGDQLLTHSNAFSLL 248 VTHSGPS +VLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFK IYL+ATLYVFTLT+PSA+A+YWAFGD LLTHSNAFSLL Sbjct: 223 VTHSGPSKMVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLVATLYVFTLTLPSASAMYWAFGDALLTHSNAFSLL 304
BLAST of CF504561 vs. ExPASy Swiss-Prot
Match: LAX2_MEDTR (Auxin transporter-like protein 2 OS=Medicago truncatula GN=LAX2 PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 3.190e-38 Identity = 74/82 (90.24%), Postives = 77/82 (93.90%), Query Frame = 3 Query: 3 VTHSGPSTLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKSIYLLATLYVFTLTIPSAAAVYWAFGDQLLTHSNAFSLL 248 VTH+GP LVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFK IYL+ATLYVFTLTIPSA AVYWAFGD+LL HSNAFSLL Sbjct: 224 VTHTGPKKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLMATLYVFTLTIPSATAVYWAFGDELLNHSNAFSLL 305
BLAST of CF504561 vs. ExPASy Swiss-Prot
Match: LAX4_MEDTR (Auxin transporter-like protein 4 OS=Medicago truncatula GN=LAX4 PE=2 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 7.107e-38 Identity = 74/82 (90.24%), Postives = 76/82 (92.68%), Query Frame = 3 Query: 3 VTHSGPSTLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKSIYLLATLYVFTLTIPSAAAVYWAFGDQLLTHSNAFSLL 248 V HSGP+ LVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFK IY LATLYVFTLTIPSA AVYWAFGD+LL HSNAFSLL Sbjct: 224 VVHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYFLATLYVFTLTIPSAVAVYWAFGDELLNHSNAFSLL 305
BLAST of CF504561 vs. ExPASy Swiss-Prot
Match: LAX1_ORYSJ (Auxin transporter-like protein 1 OS=Oryza sativa subsp. japonica GN=Os01g0856500 PE=2 SV=2) HSP 1 Score: 155.606 bits (392), Expect = 7.107e-38 Identity = 72/82 (87.80%), Postives = 79/82 (96.34%), Query Frame = 3 Query: 3 VTHSGPSTLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKSIYLLATLYVFTLTIPSAAAVYWAFGDQLLTHSNAFSLL 248 +TH+GP+ LVLYFTGATNILYTFGGHAVTVEIMHAMWKP KFK IYLLATLYVFTLT+PSA+A+YWAFGD+LLTHSNAFSLL Sbjct: 232 ITHTGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPAKFKYIYLLATLYVFTLTLPSASAMYWAFGDELLTHSNAFSLL 313
BLAST of CF504561 vs. ExPASy Swiss-Prot
Match: LAX3_ARATH (Auxin transporter-like protein 3 OS=Arabidopsis thaliana GN=LAX3 PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 9.282e-38 Identity = 72/82 (87.80%), Postives = 79/82 (96.34%), Query Frame = 3 Query: 3 VTHSGPSTLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKSIYLLATLYVFTLTIPSAAAVYWAFGDQLLTHSNAFSLL 248 V HSGP+T+VLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFK+IYLLAT+YV TLT+PSA+AVYWAFGD+LLTHSNA SLL Sbjct: 222 VKHSGPTTMVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKAIYLLATIYVLTLTLPSASAVYWAFGDKLLTHSNALSLL 303
BLAST of CF504561 vs. ExPASy Swiss-Prot
Match: AUX1_ARATH (Auxin transporter protein 1 OS=Arabidopsis thaliana GN=AUX1 PE=1 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 9.282e-38 Identity = 74/82 (90.24%), Postives = 77/82 (93.90%), Query Frame = 3 Query: 3 VTHSGPSTLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKSIYLLATLYVFTLTIPSAAAVYWAFGDQLLTHSNAFSLL 248 V HSGP+ LVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFK IYL+ATLYVFTLTIPSAAAVYWAFGD LL HSNAFSL+ Sbjct: 224 VKHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLMATLYVFTLTIPSAAAVYWAFGDALLDHSNAFSLM 305
BLAST of CF504561 vs. ExPASy Swiss-Prot
Match: LAX3_MEDTR (Auxin transporter-like protein 3 OS=Medicago truncatula GN=LAX3 PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 2.701e-37 Identity = 73/82 (89.02%), Postives = 76/82 (92.68%), Query Frame = 3 Query: 3 VTHSGPSTLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKSIYLLATLYVFTLTIPSAAAVYWAFGDQLLTHSNAFSLL 248 V HSGP+ LVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFK IYL+ATLYV TLT+PSAAAVYWAFGD LLTHSNA SLL Sbjct: 217 VKHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKMIYLIATLYVMTLTLPSAAAVYWAFGDNLLTHSNALSLL 298
BLAST of CF504561 vs. ExPASy Swiss-Prot
Match: LAX2_ARATH (Auxin transporter-like protein 2 OS=Arabidopsis thaliana GN=LAX2 PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 3.527e-37 Identity = 73/82 (89.02%), Postives = 76/82 (92.68%), Query Frame = 3 Query: 3 VTHSGPSTLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKSIYLLATLYVFTLTIPSAAAVYWAFGDQLLTHSNAFSLL 248 V HSGPS LVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKSIYL ATLYV TLT+PSA+AVYWAFGD LL HSNAF+LL Sbjct: 218 VKHSGPSKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKSIYLFATLYVLTLTLPSASAVYWAFGDLLLNHSNAFALL 299
BLAST of CF504561 vs. ExPASy Swiss-Prot
Match: LAX5_MEDTR (Auxin transporter-like protein 5 OS=Medicago truncatula GN=LAX5 PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 6.016e-37 Identity = 71/82 (86.59%), Postives = 76/82 (92.68%), Query Frame = 3 Query: 3 VTHSGPSTLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKSIYLLATLYVFTLTIPSAAAVYWAFGDQLLTHSNAFSLL 248 V HSGP+ ++LYFTGATNILYTFGGHAVTVEIMHAMWKPQKFK+IYLLATLYV TLTIPSA AVYWAFGD LL HSNAF+LL Sbjct: 220 VKHSGPNKIILYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKAIYLLATLYVLTLTIPSATAVYWAFGDMLLNHSNAFALL 301 The following BLAST results are available for this feature:
BLAST of CF504561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504561 ID=CF504561; Name=CF504561; organism=Citrus sinensis; type=EST; length=252bpback to top |