CF504581

Overview
NameCF504581
Unique NameCF504581
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length366
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13532 contig Csv1_Contig13532:86..451. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: Y3545_ARATH (Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.228e-21
Identity = 53/120 (44.17%), Postives = 78/120 (65.00%), Query Frame = 2
Query:   14 VTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIY--GRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            V RLNP   QG +E++ ++N L  L HPNL KL+G+   D  +QR+L+YE +  GSL+  ++  G  D  P+ W  R+K+AL AA+GL FLH + P + +Y +   +NI +D DF+AKLS
Sbjct:   98 VKRLNPDGFQGHREWLTEINYLGQLSHPNLVKLIGYCLED--EQRLLVYEFMHKGSLENHLFANGNKDFKPLSWILRIKVALDAAKGLAFLHSD-PVKVIYRDIKASNILLDSDFNAKLS 214          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 1.960e-19
Identity = 51/119 (42.86%), Postives = 77/119 (64.71%), Query Frame = 2
Query:   14 VTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG-PPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            V RLN    QG +E++ ++N L  L HPNL KL+G+   +  + R+L+YE +  GSL+  ++ R     P+ WNTRV++AL AA+GL FLH   P Q +Y +F  +NI +D +++AKLS
Sbjct:  105 VKRLNQEGFQGHREWLAEINYLGQLDHPNLVKLIGYCLEE--EHRLLVYEFMTRGSLENHLFRRGTFYQPLSWNTRVRMALGAARGLAFLHNAQP-QVIYRDFKASNILLDSNYNAKLS 220          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 4.366e-19
Identity = 46/113 (40.71%), Postives = 73/113 (64.60%), Query Frame = 2
Query:   32 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGP--PIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            S QG +EF+N++  +++LQHPNL KL G       +Q +L+YE L +  L R ++G+ +     +DW+TR KI L  A+GLTFLHEE   + ++ +   +N+ +DKD +AK+S
Sbjct:  712 SRQGNREFVNEIGMISALQHPNLVKLYGCCVE--GNQLILVYEYLENNCLSRALFGKDESSRLKLDWSTRKKIFLGIAKGLTFLHEESRIKIVHRDIKASNVLLDKDLNAKIS 822          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 4.366e-19
Identity = 53/118 (44.92%), Postives = 75/118 (63.56%), Query Frame = 2
Query:   14 VTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            V +L P   QG KE++ +VN L  L HPNL  L+G+ A    + R+L+YE +  GSL+  ++ R    P+ W  R+K+A+ AA+GLTFLH E   Q +Y +F  ANI +D DF+AKLS
Sbjct:  123 VKQLKPEGFQGHKEWLTEVNYLGQLSHPNLVLLVGYCAE--GENRLLVYEFMPKGSLENHLFRRG-AQPLTWAIRMKVAVGAAKGLTFLH-EAKSQVIYRDFKAANILLDADFNAKLS 236          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.270e-18
Identity = 48/110 (43.64%), Postives = 71/110 (64.55%), Query Frame = 2
Query:   38 QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGP-PIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            QG++EF+ +V TL+   HPNL KL+GF A    DQR+L+YE +  GSL+  ++    G  P+DWNTR+KIA  AA+GL +LH+      +Y +   +NI + +D+  KLS
Sbjct:  140 QGIREFVVEVLTLSLADHPNLVKLIGFCAE--GDQRLLVYEYMPQGSLEDHLHVLPSGKKPLDWNTRMKIAAGAARGLEYLHDRMTPPVIYRDLKCSNILLGEDYQPKLS 247          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.828e-18
Identity = 47/109 (43.12%), Postives = 71/109 (65.14%), Query Frame = 2
Query:   38 QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            QG KE++ +VN L  L HPNL KL+G+      + R+L+YE +  GSL+  ++ R    P+ W  R+K+A+ AA+GLTFLH +   Q +Y +F  ANI +D +F++KLS
Sbjct:  129 QGHKEWLTEVNYLGQLSHPNLVKLVGYCVE--GENRLLVYEFMPKGSLENHLF-RRGAQPLTWAIRMKVAIGAAKGLTFLH-DAKSQVIYRDFKAANILLDAEFNSKLS 233          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.396e-17
Identity = 48/119 (40.34%), Postives = 75/119 (63.03%), Query Frame = 2
Query:   14 VTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGR-SDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            V +LN    QG +E++ ++N L  L HPNL KL+G+   D  + R+L+YE +  GSL+  ++ R +   P+ W  RV +AL AA+GL FLH + P + +Y +   +NI +D D++AKLS
Sbjct:  104 VKKLNQEGFQGHREWLTEINYLGQLSHPNLVKLIGYCLED--EHRLLVYEFMQKGSLENHLFRRGAYFKPLPWFLRVNVALDAAKGLAFLHSD-PVKVIYRDIKASNILLDADYNAKLS 219          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 3.129e-17
Identity = 49/119 (41.18%), Postives = 74/119 (62.18%), Query Frame = 2
Query:   14 VTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGR-SDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            V +LN    QG +E++ +VN L    HPNL KL+G+   D  + R+L+YE +  GSL+  ++ R S   P+ W  R+K+AL AA+GL FLH       +Y +F T+NI +D +++AKLS
Sbjct:  106 VKKLNQDGWQGHQEWLAEVNYLGQFSHPNLVKLIGYCLED--EHRLLVYEFMPRGSLENHLFRRGSYFQPLSWTLRLKVALGAAKGLAFLH-NAETSVIYRDFKTSNILLDSEYNAKLS 221          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.338e-17
Identity = 45/112 (40.18%), Postives = 66/112 (58.93%), Query Frame = 2
Query:   32 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYG-RSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            S QG +EF+N++  ++ LQHPNL KL GF       Q +L YE + + SL   ++  +    P+DW TR KI    A+GL FLHEE P + ++ +    NI +DKD + K+S
Sbjct:  715 SRQGNREFLNEIGAISCLQHPNLVKLHGFCVERA--QLLLAYEYMENNSLSSALFSPKHKQIPMDWPTRFKICCGIAKGLAFLHEESPLKFVHRDIKATNILLDKDLTPKIS 824          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 9.105e-17
Identity = 51/113 (45.13%), Postives = 74/113 (65.49%), Query Frame = 2
Query:   38 QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPP----IDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            QG +EF+ +V  L+ L HPNL  L+G+ A DG DQR+L+YE +  GSL+  ++   D PP    +DWN R+KIA  AA+GL FLH++     +Y +F ++NI +D+ F  KLS
Sbjct:  123 QGNREFLVEVLMLSLLHHPNLVNLIGYCA-DG-DQRLLVYEFMPLGSLEDHLH---DLPPDKEALDWNMRMKIAAGAAKGLEFLHDKANPPVIYRDFKSSNILLDEGFHPKLS 230          
The following BLAST results are available for this feature:
BLAST of CF504581 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
Y3545_ARATH1.228e-2144.17Probable receptor-like protein kinase At3g55450 OS... [more]
NAK_ARATH1.960e-1942.86Probable serine/threonine-protein kinase NAK OS=Ar... [more]
Y1765_ARATH4.366e-1940.71Probable LRR receptor-like serine/threonine-protei... [more]
APK2A_ARATH4.366e-1944.92Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]
RLCK7_ARATH1.270e-1843.64Probable serine/threonine-protein kinase RLCKVII O... [more]
APK2B_ARATH4.828e-1843.12Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
BIK1_ARATH2.396e-1740.34Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]
APK1B_ARATH3.129e-1741.18Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
RKF1_ARATH5.338e-1740.18Probable LRR receptor-like serine/threonine-protei... [more]
PBS1_ARATH9.105e-1745.13Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-070 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-19_H11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504581 ID=CF504581; Name=CF504581; organism=Citrus sinensis; type=EST; length=366bp
GTTTGAAGCCACTGTTACTCGCCTTAATCCATCCAGCCAGGGTGTGAAGG
AATTTATAAATGATGTAAACACCCTTGCATCATTGCAACATCCAAATCTC
TGTAAATTGCTTGGTTTTCATGCACGTGATGGATCGGACCAGAGAATGTT
GATCTATGAGAGACTTTTTCATGGAAGCTTGGACCGTCTTATTTATGGGA
GATCAGATGGGCCTCCAATTGATTGGAACACCAGGGTAAAAATTGCATTA
TGTGCTGCACAAGGTCTTACCTTCTTGCATGAAGAAGGGCCTTTTCAGGC
AATGTACAATGAATTTTCAACTGCCAACATACAAATTGACAAAGATTTTA
GTGCGAAGCTTTCAGG
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