CF504585
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF504585 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 1.083e-17 Identity = 37/81 (45.68%), Postives = 48/81 (59.26%), Query Frame = 1 Query: 58 QQGTVEAGVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCP 300 Q G+ G VCP CCS+FGWCG T+DYC GCQS C+ CG P + G + I+SR +F+ +L +RND CP Sbjct: 23 QCGSQAGGAVCPNCLCCSQFGWCGSTSDYCGAGCQSQCSAAGCGGGGPTPPSGSGGSGVASIVSRSLFDQMLLHRNDAACP 103
BLAST of CF504585 vs. ExPASy Swiss-Prot
Match: CHIB_POPTR (Acidic endochitinase WIN6.2B OS=Populus trichocarpa PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 9.169e-17 Identity = 42/87 (48.28%), Postives = 52/87 (59.77%), Query Frame = 1 Query: 55 AQQGTVEAG-VVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDG----GELGKIISRKMFEDLLEYRNDKRCP 300 A+Q +AG +CPGG CCS +GWCG T DYC +GCQS C+ G G G G G L II MF+D+L+YRND +CP Sbjct: 21 AEQCGQQAGDALCPGGLCCSSYGWCGTTADYCGDGCQSQCDGGGGGGGGGGGGGGGGGGGGDGYLSDIIPESMFDDMLKYRNDPQCP 107
BLAST of CF504585 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 9.169e-17 Identity = 42/88 (47.73%), Postives = 50/88 (56.82%), Query Frame = 1 Query: 58 QQGTVEAGVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGE-----CDPDDGTAGDG--GELGKIISRKMFEDLLEYRNDKRCP 300 Q G +CPGG CCS +GWCG T DYC GCQS C+ G+ CD D GDG G L II + F+ LL++RND RCP Sbjct: 24 QCGRQAGDALCPGGLCCSSYGWCGTTVDYCGIGCQSQCDGGGGGDGGDDGCDGGDDGGGDGDDGYLSDIIPKSKFDALLKFRNDARCP 111
BLAST of CF504585 vs. ExPASy Swiss-Prot
Match: CHIB_VITVI (Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.197e-16 Identity = 37/81 (45.68%), Postives = 48/81 (59.26%), Query Frame = 1 Query: 58 QQGTVEAGVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCP 300 Q G G VCPGG CCS+FGWCG T DYC GCQS C+ G++G++I+R MF D+L++RN+ CP Sbjct: 22 QCGGQAGGRVCPGGACCSKFGWCGNTADYCGSGCQSQCSST---------------GDIGQLITRSMFNDMLKHRNEGSCP 87
BLAST of CF504585 vs. ExPASy Swiss-Prot
Match: CHIC_POPTR (Acidic endochitinase WIN6.2C (Fragment) OS=Populus trichocarpa PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 3.484e-16 Identity = 41/83 (49.40%), Postives = 50/83 (60.24%), Query Frame = 1 Query: 58 QQGTVEAGVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGE-CDPDDGTAGDG--GELGKIISRKMFEDLLEYRNDKRC 297 Q G +CPGG CCS +GWCG T DYC +GCQS C+ G+ CD G GDG G L II + F+ LL++RND RC Sbjct: 24 QCGRQAGDALCPGGLCCSFYGWCGTTVDYCGDGCQSQCDG---GDGCDGGGGGGGDGDDGYLSDIIPKSTFDALLKFRNDPRC 103
BLAST of CF504585 vs. ExPASy Swiss-Prot
Match: CHIT_PHAVU (Endochitinase OS=Phaseolus vulgaris PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.014e-15 Identity = 37/81 (45.68%), Postives = 46/81 (56.79%), Query Frame = 1 Query: 58 QQGTVEAGVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCP 300 Q G G +CPGG CCS+FGWCG TTDYC GCQS C G + +L +ISR F+ +L++RND CP Sbjct: 29 QCGRQAGGALCPGGNCCSQFGWCGSTTDYCGPGCQSQCG-----------GPSPAPTDLSALISRSTFDQMLKHRNDGACP 98
BLAST of CF504585 vs. ExPASy Swiss-Prot
Match: CHI2_PEA (Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 1.014e-15 Identity = 37/80 (46.25%), Postives = 50/80 (62.50%), Query Frame = 1 Query: 58 QQGTVEAGVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRC 297 Q GT G +CPGG CCS+FGWCG T++YC +GCQS C+ G++G GG L +IS F ++L++RND C Sbjct: 22 QCGTQAGGALCPGGLCCSKFGWCGSTSEYCGDGCQSQCS-----------GSSG-GGTLSSLISGDTFNNMLKHRNDNAC 89
BLAST of CF504585 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 1.324e-15 Identity = 40/81 (49.38%), Postives = 47/81 (58.02%), Query Frame = 1 Query: 58 QQGTVEAGVVCPGGECCSRFGWCGLTTDYCCEG-CQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRC 297 Q G+ G CP G CCS+FGWCG T DYC G CQS C G P T GG+LG IIS MF+ +L++RND C Sbjct: 25 QCGSQAGGARCPSGLCCSKFGWCGNTNDYCGPGNCQSQCP----GGPTPTPPTPPGGGDLGSIISSSMFDQMLKHRNDNAC 101
BLAST of CF504585 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.729e-15 Identity = 35/81 (43.21%), Postives = 48/81 (59.26%), Query Frame = 1 Query: 58 QQGTVEAGVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCP 300 Q G+ G +CP CCS++GWCG T+ YC GCQS C+ CG P + G G + I+SR +F+ +L +RND CP Sbjct: 22 QCGSQAGGALCPNCLCCSQYGWCGSTSAYCGSGCQSQCSG-SCGGGGPTPPSGGGGSGVASIVSRSLFDQMLLHRNDAACP 101
BLAST of CF504585 vs. ExPASy Swiss-Prot
Match: CHI9_ORYSJ (Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht9 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.852e-15 Identity = 38/86 (44.19%), Postives = 50/86 (58.14%), Query Frame = 1 Query: 58 QQGTVEAGVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELG-----KIISRKMFEDLLEYRNDKRCP 300 Q G+ G +CP CCS +GWCG T+DYC +GCQS C+ CG G G GG G ++S+++FE LL +RND CP Sbjct: 25 QCGSQAGGALCPNCLCCSSYGWCGSTSDYCGDGCQSQCDG--CGGGGGGGGGGGGGGGGGGGAVEAVVSKELFEQLLLHRNDAACP 108 The following BLAST results are available for this feature:
BLAST of CF504585 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504585 ID=CF504585; Name=CF504585; organism=Citrus sinensis; type=EST; length=301bpback to top |