CF504591

Overview
NameCF504591
Unique NameCF504591
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length427
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12352 contig Csv1_Contig12352:978..1404. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504591 vs. ExPASy Swiss-Prot
Match: DCAM_DATST (S-adenosylmethionine decarboxylase proenzyme OS=Datura stramonium GN=SAMDC PE=2 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 6.985e-60
Identity = 105/139 (75.54%), Postives = 123/139 (88.49%), Query Frame = 1
Query:    1 PHRNFSEEVSVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSASAEPLISSDPVFTIEMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGAAISTVHVTPEDGFSYASFETVGYD 417
            PHR+FSEEV+VLD YFGKL +GS A I+G   K QKWHVYSASA P+ S+DPV+T+EMC+TGLDRE ASVFYKT+  SA  MTV SGIRKILP+S+ICDFEF+PCGYSMNS+EGAA+ST+H+TPEDGFSYASFE+VGYD
Sbjct:  129 PHRHFSEEVAVLDGYFGKLAAGSKAVIMGNPDKTQKWHVYSASAGPVQSNDPVYTLEMCMTGLDREKASVFYKTEGSSAAHMTVRSGIRKILPNSEICDFEFEPCGYSMNSIEGAAVSTIHITPEDGFSYASFESVGYD 267          
BLAST of CF504591 vs. ExPASy Swiss-Prot
Match: DCAM_TOBAC (S-adenosylmethionine decarboxylase proenzyme OS=Nicotiana tabacum GN=SAMDC PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 9.123e-60
Identity = 105/139 (75.54%), Postives = 122/139 (87.77%), Query Frame = 1
Query:    1 PHRNFSEEVSVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSASAEPLISSDPVFTIEMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGAAISTVHVTPEDGFSYASFETVGYD 417
            PHR+FSEEV+VLD YFGKL +GS A I+G   K QKWHVYSASA P+ S+DPV+T+EMC+TGLDRE ASVFYKT+  SA  MTV SGIRKILP+S+ICDFEF+PCGYSMNS+EGAA+ST+H+TPEDGFSYASFE VGYD
Sbjct:  129 PHRHFSEEVAVLDGYFGKLAAGSKAVIMGSPDKAQKWHVYSASAGPIQSNDPVYTLEMCMTGLDREKASVFYKTEGSSAAHMTVRSGIRKILPNSEICDFEFEPCGYSMNSIEGAALSTIHITPEDGFSYASFEAVGYD 267          
BLAST of CF504591 vs. ExPASy Swiss-Prot
Match: DCAM_NICSY (S-adenosylmethionine decarboxylase proenzyme OS=Nicotiana sylvestris GN=SAMDC1 PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 9.123e-60
Identity = 105/139 (75.54%), Postives = 122/139 (87.77%), Query Frame = 1
Query:    1 PHRNFSEEVSVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSASAEPLISSDPVFTIEMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGAAISTVHVTPEDGFSYASFETVGYD 417
            PHR+FSEEV+VLD YFGKL +GS A I+G   K QKWHVYSASA P+ S+DPV+T+EMC+TGLDRE ASVFYKT+  SA  MTV SGIRKILP+S+ICDFEF+PCGYSMNS+EGAA+ST+H+TPEDGFSYASFE VGYD
Sbjct:  129 PHRHFSEEVAVLDGYFGKLAAGSKAVIMGSPDKAQKWHVYSASAGPIQSNDPVYTLEMCMTGLDREKASVFYKTEGSSAAHMTVRSGIRKILPNSEICDFEFEPCGYSMNSIEGAALSTIHITPEDGFSYASFEAVGYD 267          
BLAST of CF504591 vs. ExPASy Swiss-Prot
Match: DCAM_SOLTU (S-adenosylmethionine decarboxylase proenzyme OS=Solanum tuberosum GN=SAMDC PE=1 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 1.317e-58
Identity = 103/140 (73.57%), Postives = 122/140 (87.14%), Query Frame = 1
Query:    1 PHRNFSEEVSVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSASAEPLISSDPVFTIEMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGAAISTVHVTPEDGFSYASFETVGYDP 420
            PHR+FSEEV+VLD YFGKL +GS A I+G   K QKWHVYSASA  + S+DPV+T+EMC+TGLDRE ASVFYKT+  SA  MTV SGIRKILP S+ICDFEF+PCGYSMNS+EGAA+ST+H+TPEDGF+YASFE+VGY+P
Sbjct:  129 PHRHFSEEVAVLDGYFGKLAAGSKAVIMGSPDKTQKWHVYSASAGSVQSNDPVYTLEMCMTGLDREKASVFYKTEESSAAHMTVRSGIRKILPKSEICDFEFEPCGYSMNSIEGAAVSTIHITPEDGFTYASFESVGYNP 268          
BLAST of CF504591 vs. ExPASy Swiss-Prot
Match: DCAM_VICFA (S-adenosylmethionine decarboxylase proenzyme OS=Vicia faba GN=SAMDC PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 3.833e-58
Identity = 102/139 (73.38%), Postives = 122/139 (87.77%), Query Frame = 1
Query:    1 PHRNFSEEVSVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSASAEPLISSDPVFTIEMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGAAISTVHVTPEDGFSYASFETVGYD 417
            PHR+FSEEV+VLD +FGKL SGS AYI+GGS + Q WHVY ASA+ +  +D V+T+EMC+TGLDRE ASVF+K Q+GSA  MTVNSGIRKILP+S+ICDF+F+PCGYSMNSVEG A+ST+H+TPEDGFSYASFET GYD
Sbjct:  125 PHRHFSEEVAVLDGFFGKLGSGSKAYIMGGSDEAQNWHVYCASADSVSPADSVYTLEMCMTGLDREKASVFFKQQTGSAAEMTVNSGIRKILPNSEICDFDFEPCGYSMNSVEGPAVSTIHITPEDGFSYASFETAGYD 263          
BLAST of CF504591 vs. ExPASy Swiss-Prot
Match: DCAM_SOLCI (S-adenosylmethionine decarboxylase proenzyme OS=Solanum chilense GN=SAMDC PE=2 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 1.115e-57
Identity = 102/140 (72.86%), Postives = 119/140 (85.00%), Query Frame = 1
Query:    1 PHRNFSEEVSVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSASAEPLISSDPVFTIEMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGAAISTVHVTPEDGFSYASFETVGYDP 420
            PHR+FSEEV+VLD YFGKL +GS A I+G   K QKWHVYSASA  +  +DPV+T+EMC+ GLDRE ASVFYKT+  SA  MTV SGIRKILP  +ICDFEF+PCGYSMNS+EGAA+ST+H+TPEDGFSYASFE+VGYDP
Sbjct:  127 PHRHFSEEVAVLDGYFGKLAAGSKAVIMGNPDKTQKWHVYSASAGTVQCNDPVYTLEMCMAGLDREKASVFYKTEESSAAHMTVRSGIRKILPKFEICDFEFEPCGYSMNSIEGAAVSTIHITPEDGFSYASFESVGYDP 266          
BLAST of CF504591 vs. ExPASy Swiss-Prot
Match: DCAM_IPOBA (S-adenosylmethionine decarboxylase proenzyme OS=Ipomoea batatas GN=SAMDC PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 1.456e-57
Identity = 101/142 (71.13%), Postives = 123/142 (86.62%), Query Frame = 1
Query:    1 PHRNFSEEVSVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSASAEPLISSDPVFTIEMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGAAISTVHVTPEDGFSYASFETVGYDPND 426
            PHRNFSEEV++LDSYFGKL +GS AY++GG+GK Q+WHVYSASAE   ++ P++T+EMC+TGLD++ ASVF+KTQS SA  MT  SGIRKILP S+ICDF+F+PCGYSMN+VEG AIS +HVTPEDGFSYASFE +GYD  D
Sbjct:  127 PHRNFSEEVAILDSYFGKLSTGSKAYVMGGAGKQQQWHVYSASAESAENTFPIYTLEMCMTGLDKKSASVFFKTQSSSAAVMTDASGIRKILPGSEICDFDFEPCGYSMNAVEGGAISPIHVTPEDGFSYASFEAMGYDFKD 268          
BLAST of CF504591 vs. ExPASy Swiss-Prot
Match: DCAM_DAUCA (S-adenosylmethionine decarboxylase proenzyme OS=Daucus carota GN=SAMDC PE=2 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 1.902e-57
Identity = 102/140 (72.86%), Postives = 121/140 (86.43%), Query Frame = 1
Query:    1 PHRNFSEEVSVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSASAEPLISSDPVFTIEMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGAAISTVHVTPEDGFSYASFETVGYDP 420
            PHR+FSEEVSVLD+YFGKL SGS AYI+GGS K QKWHVYSA A    + DPV+T+EMC+T L+R+ ASVFYKT S SA ++T NSG+R ILP+S+ICDFEFDPCGYSMN+VEG A+ST+H+TPEDGFSY+SFE VGYDP
Sbjct:  127 PHRSFSEEVSVLDNYFGKLGSGSKAYIMGGSDKQQKWHVYSACAASTRTLDPVYTMEMCMTSLNRDKASVFYKTNSSSATSVTDNSGLRDILPNSRICDFEFDPCGYSMNAVEGPAVSTIHITPEDGFSYSSFEAVGYDP 266          
BLAST of CF504591 vs. ExPASy Swiss-Prot
Match: DCAM_IPONI (S-adenosylmethionine decarboxylase proenzyme OS=Ipomoea nil GN=SAMDC PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 5.535e-57
Identity = 100/142 (70.42%), Postives = 121/142 (85.21%), Query Frame = 1
Query:    1 PHRNFSEEVSVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSASAEPLISSDPVFTIEMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGAAISTVHVTPEDGFSYASFETVGYDPND 426
            PHRNFSEEV++LD YFGKL +GS AY++GG+GK Q+WHVYSASAE   ++ P++T+EMC+TGLD++ ASVF+KTQS SA  MT  SGIRKILP S ICDF+F+PCGYSMN+VEG  IST+HVTPEDGFSYASFE +GYD  D
Sbjct:  127 PHRNFSEEVAILDGYFGKLGTGSKAYVMGGAGKQQQWHVYSASAESAENTFPIYTLEMCMTGLDKKSASVFFKTQSSSAAVMTDASGIRKILPGSDICDFDFEPCGYSMNAVEGGTISTIHVTPEDGFSYASFEAMGYDFKD 268          
BLAST of CF504591 vs. ExPASy Swiss-Prot
Match: DCAM_CATRO (S-adenosylmethionine decarboxylase proenzyme OS=Catharanthus roseus GN=SAMDC PE=1 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 5.535e-57
Identity = 103/139 (74.10%), Postives = 117/139 (84.17%), Query Frame = 1
Query:    1 PHRNFSEEVSVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSASAEPLISSDPVFTIEMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGAAISTVHVTPEDGFSYASFETVGYD 417
            PHR+FSEEV +LD+YFGKL   SNA+I+G   +PQKWHVYSAS     SSDP +T+EMC+TGLDRE ASVFYK++S SA  MT  SGIRKILPDS+ICDFEFDPCGYSMNS+E AAIST+HVTPEDGFSYASFE  GYD
Sbjct:  127 PHRSFSEEVELLDNYFGKLGLESNAFIMGNPDQPQKWHVYSASVGSEQSSDPTYTLEMCMTGLDREKASVFYKSESSSAALMTTRSGIRKILPDSEICDFEFDPCGYSMNSIEEAAISTIHVTPEDGFSYASFEAAGYD 265          
The following BLAST results are available for this feature:
BLAST of CF504591 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
DCAM_DATST6.985e-6075.54S-adenosylmethionine decarboxylase proenzyme OS=Da... [more]
DCAM_TOBAC9.123e-6075.54S-adenosylmethionine decarboxylase proenzyme OS=Ni... [more]
DCAM_NICSY9.123e-6075.54S-adenosylmethionine decarboxylase proenzyme OS=Ni... [more]
DCAM_SOLTU1.317e-5873.57S-adenosylmethionine decarboxylase proenzyme OS=So... [more]
DCAM_VICFA3.833e-5873.38S-adenosylmethionine decarboxylase proenzyme OS=Vi... [more]
DCAM_SOLCI1.115e-5772.86S-adenosylmethionine decarboxylase proenzyme OS=So... [more]
DCAM_IPOBA1.456e-5771.13S-adenosylmethionine decarboxylase proenzyme OS=Ip... [more]
DCAM_DAUCA1.902e-5772.86S-adenosylmethionine decarboxylase proenzyme OS=Da... [more]
DCAM_IPONI5.535e-5770.42S-adenosylmethionine decarboxylase proenzyme OS=Ip... [more]
DCAM_CATRO5.535e-5774.10S-adenosylmethionine decarboxylase proenzyme OS=Ca... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-080 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-1_A12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504591 ID=CF504591; Name=CF504591; organism=Citrus sinensis; type=EST; length=427bp
CCTCATCGCAACTTTTCTGAAGAAGTTTCTGTCCTTGATAGCTATTTTGG
GAAGCTTGTTTCAGGAAGCAATGCATACATAATTGGTGGGTCAGGCAAGC
CACAGAAATGGCATGTATACTCTGCATCTGCAGAACCACTGATCTCTAGT
GACCCTGTTTTCACCATAGAGATGTGCTTGACTGGCCTGGATAGGGAAAT
GGCTTCTGTTTTCTACAAAACCCAATCAGGTTCAGCTGGTGCAATGACCG
TCAATTCTGGTATAAGAAAGATTCTTCCAGATTCCAAGATATGTGATTTT
GAGTTTGACCCTTGTGGTTATTCCATGAATTCTGTTGAAGGGGCTGCTAT
TTCTACTGTTCATGTTACTCCAGAGGATGGTTTCAGCTATGCCAGCTTTG
AAACAGTTGGTTATGATCCTAATGATG
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