CF504667

Overview
NameCF504667
Unique NameCF504667
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length588
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4696 contig Csv1_Contig4696:92..679. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504667 vs. ExPASy Swiss-Prot
Match: IOLG_SALTY (Inositol 2-dehydrogenase OS=Salmonella typhimurium GN=iolG PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 8.039e-16
Identity = 54/160 (33.75%), Postives = 85/160 (53.12%), Query Frame = 3
Query:   36 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVEAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSIGQVKMVAIREH 515
            +K GI+G+GM+G +H   L +  S GV VV + D      Q AL   + +    K +  + +L++    +VV+++  N  H  + +  +N  K  +V  EKPL  T ADC++V+EA +K    +VQ+G   RY     +L  I+ SG IGQ  MV  R +
Sbjct:    3 LKAGIVGIGMIGSDHLRRLANTVS-GVEVVAVCDIVAGRAQAAL---DKYAIEAKDYNDYHDLINDKDVEVVIITASNEAHADVAVAALNANK--YVFCEKPLAVTAADCQRVIEAEQKNGKRMVQIGFMRRYDKGYVQLKNIIDSGEIGQPLMVHGRHY 156          
BLAST of CF504667 vs. ExPASy Swiss-Prot
Match: IOLG_SALPB (Inositol 2-dehydrogenase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=iolG PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 8.039e-16
Identity = 54/160 (33.75%), Postives = 85/160 (53.12%), Query Frame = 3
Query:   36 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVEAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSIGQVKMVAIREH 515
            +K GI+G+GM+G +H   L +  S GV VV + D      Q AL   + +    K +  + +L++    +VV+++  N  H  + +  +N  K  +V  EKPL  T ADC++V+EA +K    +VQ+G   RY     +L  I+ SG IGQ  MV  R +
Sbjct:    3 LKAGIVGIGMIGSDHLRRLANTVS-GVEVVAVCDIVAGRAQAAL---DKYAIEAKDYNDYHDLINDKDVEVVIITASNEAHADVAVAALNANK--YVFCEKPLAVTAADCQRVIEAEQKNGKRMVQIGFMRRYDKGYVQLKNIIDSGEIGQPLMVHGRHY 156          
BLAST of CF504667 vs. ExPASy Swiss-Prot
Match: IOLG_SALA4 (Inositol 2-dehydrogenase OS=Salmonella agona (strain SL483) GN=iolG PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 8.039e-16
Identity = 54/160 (33.75%), Postives = 85/160 (53.12%), Query Frame = 3
Query:   36 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVEAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSIGQVKMVAIREH 515
            +K GI+G+GM+G +H   L +  S GV VV + D      Q AL   + +    K +  + +L++    +VV+++  N  H  + +  +N  K  +V  EKPL  T ADC++V+EA +K    +VQ+G   RY     +L  I+ SG IGQ  MV  R +
Sbjct:    3 LKAGIVGIGMIGSDHLRRLANTVS-GVEVVAVCDIVAGRAQAAL---DKYAIEAKDYNDYHDLINDKDVEVVIITASNEAHADVAVAALNANK--YVFCEKPLAVTAADCQRVIEAEQKNGKRMVQIGFMRRYDKGYVQLKNIIDSGEIGQPLMVHGRHY 156          
BLAST of CF504667 vs. ExPASy Swiss-Prot
Match: IOLG4_SACEN (Inositol 2-dehydrogenase 4 OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=iolG4 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.734e-13
Identity = 51/158 (32.28%), Postives = 83/158 (52.53%), Query Frame = 3
Query:   24 ANDKVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQA---LKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVEAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSIGQ 488
            +N +++ G++G G+MG +H   +H  R  G S+V + DP L+  ++A   ++       PLKV       +++   D VV++TP  TH  +L+  I    P  VL EKPL        +VVEA       LVQVG   R+ P  A+L + + +G++G+
Sbjct:    2 SNRELRVGLVGAGLMGSDHATRIHR-RISGASLVAVGDPDLERAERAAAGIEGCQVETDPLKV-------IEASDVDAVVLATPGRTHEPLLLAAIERGIP--VLCEKPLTPDSKSSLRVVEAEVAAGRRLVQVGFMRRFDPEYAELKRTLHAGALGR 149          
BLAST of CF504667 vs. ExPASy Swiss-Prot
Match: IOLG_RUBXD (Inositol 2-dehydrogenase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=iolG PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 6.370e-13
Identity = 49/153 (32.03%), Postives = 81/153 (52.94%), Query Frame = 3
Query:   27 NDKVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVEAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSIG 485
            ++++  G++G G MG  H  NLH  R  G  +V +AD   +      + + A     +VF    +L+ S   + VV+++P+ TH  ++++ + + KP  VL EKPL  +    +KVVEA  +    LVQVG   RY P    + + V SG++G
Sbjct:    5 SERIAVGVVGTGGMGGMHAENLH-FRVPGARLVAVADLDTRRAGGVAERSGA-----EVFEDGFDLIRSDRVEAVVIASPDPTHAPLVLECLKNEKP--VLCEKPLADSADAARKVVEAEVELGRKLVQVGFMRRYDPQHVAVKEAVASGAVG 149          
BLAST of CF504667 vs. ExPASy Swiss-Prot
Match: IOLG_BACA2 (Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase OS=Bacillus amyloliquefaciens (strain FZB42) GN=iolG PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 6.370e-13
Identity = 50/163 (30.67%), Postives = 80/163 (49.08%), Query Frame = 3
Query:   36 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVEAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSIGQVKMVAIREHRFP 524
            ++ G+IG G +G+EH IN    +  G  +  + D + ++ QQ ++    F+    V+P    LL +   D V+V++    H   ++  I H K  HV  EKPL TT   C ++VE   K    LVQVG   RY     +L + + +  +G+  M+    HR P
Sbjct:    3 LRIGVIGTGAIGKEH-INRITNKLSGAEITAVTDVNQEAAQQTVQ---DFNLNASVYPDDDSLLAAENVDAVLVTSWGPAHESSVLKAIQHGK--HVFCEKPLATTAEGCMRIVEEEMKTGKRLVQVGFMRRYDSGYVQLKEAIDNRVVGEPLMIHC-AHRNP 158          
BLAST of CF504667 vs. ExPASy Swiss-Prot
Match: IOLG_SERP5 (Inositol 2-dehydrogenase OS=Serratia proteamaculans (strain 568) GN=iolG PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.495e-11
Identity = 51/160 (31.87%), Postives = 76/160 (47.50%), Query Frame = 3
Query:   45 GIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVEAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSIGQVKMVAIREHRFP 524
            G+IG G +GR+H      +  QG  +V + D +   R  A K+ +      KV+    +L+ +     V+V++   +H + ++  I   KP  V  EKPL  T   CK +VEA  K    LVQVG    Y      L Q++ SG IG+  M+    HR P
Sbjct:    6 GVIGTGAIGRDHIRRCSKVL-QGSRIVAVNDIN---RDNAAKVVSDLKLDAKVYDNGHDLVKAADVQAVLVTSWGPSHEEFVLAAIAAGKP--VFCEKPLAVTAQGCKNIVEAEAKHGKRLVQVGFMRPYDQGYRALKQVLTSGQIGEPLMLHC-AHRNP 158          
BLAST of CF504667 vs. ExPASy Swiss-Prot
Match: IOLG3_SACEN (Inositol 2-dehydrogenase 3 OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=iolG3 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.565e-11
Identity = 51/163 (31.29%), Postives = 81/163 (49.69%), Query Frame = 3
Query:   36 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVEAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSIGQVKMVAIREHRFP 524
            V+ G+IG GM+G++H   L  + + G  +V + D       +A  +A       +  P   +++ S   D V+V++   TH + ++  I   K   V  EKPL T V DC ++VEA   R   LVQVG   RY     ++ ++V +G IG   ++A   HR P
Sbjct:    3 VRVGVIGTGMIGQDHIRRLTRVVT-GAEIVAVTDI---DADRAASVAGGVG--ARTMPSGADVIGSADVDAVLVTSWGPTHAEHVLAAIEAGKA--VFCEKPLATEVEDCLRIVEAESARGKRLVQVGFMRRYDAGYREMKELVDAGGIG-TPLMAHCVHRNP 156          
BLAST of CF504667 vs. ExPASy Swiss-Prot
Match: IOLG_BACHD (Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase OS=Bacillus halodurans GN=iolG PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.962e-11
Identity = 48/163 (29.45%), Postives = 79/163 (48.47%), Query Frame = 3
Query:   36 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVEAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSIGQVKMVAIREHRFP 524
            +++G+IG G +GREH   + +  S G  +V + D    +++ A ++         V+P  + L+ +   D V+V++    H   ++  I   K  +V VEKPL TT   C K+++A       LVQVG   RY     +L + +    IG+  MV    HR P
Sbjct:    3 LRFGVIGTGAIGREHMKRIENKLSGG-KIVAVTD---MNQEAAKQVVTQMKLEADVYPDDRSLVAADNVDAVLVTSWGPAHEANVLAAIEAGK--YVFVEKPLATTAEGCMKIIKAEMNHGKRLVQVGFMRRYDKGYVQLKKAIDDHFIGEPLMVRC-AHRNP 158          
BLAST of CF504667 vs. ExPASy Swiss-Prot
Match: IOLG_ACIC1 (Inositol 2-dehydrogenase OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=iolG PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.962e-11
Identity = 55/169 (32.54%), Postives = 81/169 (47.93%), Query Frame = 3
Query:   18 MAANDKVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVEAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSIGQVKMVAIREHRFP 524
            MA +  V+ G+IG G +G +H   L  +  +G  VV + D       +A  +A  F    +V P    L+     D VVV++   TH   ++  I   KP  V  EKPL TT A C ++VEA +      V+VG   R+ P    L   ++SG+IG   ++A   HR P
Sbjct:    1 MATDRSVRIGLIGAGAIGEDHARRLSTV-IRGADVVAVHDV---DPSRAKTVATRFR-DARVIPDGNSLIGDPDVDAVVVASAAPTHEAYVLAAIAARKP--VFCEKPLATTAAGCLRIVEAEKAHGRRFVRVGFMRRFDPAYLGLKAELRSGAIGH-PLLAHLAHRNP 161          
The following BLAST results are available for this feature:
BLAST of CF504667 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
IOLG_SALTY8.039e-1633.75Inositol 2-dehydrogenase OS=Salmonella typhimurium... [more]
IOLG_SALPB8.039e-1633.75Inositol 2-dehydrogenase OS=Salmonella paratyphi B... [more]
IOLG_SALA48.039e-1633.75Inositol 2-dehydrogenase OS=Salmonella agona (stra... [more]
IOLG4_SACEN3.734e-1332.28Inositol 2-dehydrogenase 4 OS=Saccharopolyspora er... [more]
IOLG_RUBXD6.370e-1332.03Inositol 2-dehydrogenase OS=Rubrobacter xylanophil... [more]
IOLG_BACA26.370e-1330.67Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydr... [more]
IOLG_SERP53.495e-1131.88Inositol 2-dehydrogenase OS=Serratia proteamaculan... [more]
IOLG3_SACEN4.565e-1131.29Inositol 2-dehydrogenase 3 OS=Saccharopolyspora er... [more]
IOLG_BACHD5.962e-1129.45Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydr... [more]
IOLG_ACIC15.962e-1132.54Inositol 2-dehydrogenase OS=Acidothermus celluloly... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-156 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-1_H12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504667 ID=CF504667; Name=CF504667; organism=Citrus sinensis; type=EST; length=588bp
AAGCAAGAAACGAAATCATGGCGGCTAATGATAAGGTGAAGTACGGCATC
ATAGGCATGGGAATGATGGGAAGAGAGCACTTCATCAATCTGCACCATCT
CCGCAGCCAAGGCGTGTCCGTTGTCTGCATAGCTGACCCTCATCTTCAAT
CTCGGCAACAAGCCCTCAAATTAGCTAACGCTTTTGACTGGCCCCTCAAG
GTTTTTCCGGGGCATCAAGAGCTACTGGACAGTGGACTTTGTGATGTAGT
GGTCGTGTCGACTCCGAACATGACTCATTACCAAATTCTGATGGATATTA
TCAACCATCCAAAGCCTCATCATGTGCTCGTTGAGAAACCGTTGTGCACG
ACAGTTGCGGACTGCAAAAAGGTTGTTGAAGCTGCCAGGAAGAGACCGGA
TATATTGGTTCAAGTCGGACTAGAGTACAGGTACATGCCACCTGTTGCTA
AACTGATACAAATAGTTAAGAGCGGATCTATTGGACAAGTGAAGATGGTG
GCAATCCGAGAACATCGTTTTCCTTTCTTGGTTAAGGTCAACGATTGGAA
TCGGTTCAATGAAAACACAGGGGGTACTCTGGTGGAGA
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