CF504684
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF504684 vs. ExPASy Swiss-Prot
Match: GAT10_ARATH (GATA transcription factor 10 OS=Arabidopsis thaliana GN=GATA10 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.412e-17 Identity = 46/92 (50.00%), Postives = 54/92 (58.70%), Query Frame = 3 Query: 45 ESRLVIKIPKQFNPEHXXXXXXXLSVP-KVSDETSEVGPTQAV---------------RKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKS 272 +SRL+I+IPKQF +H K++ +S G V RKCMHCE+TKTPQWR GPMGPKTLCNACGVRYKS Sbjct: 171 DSRLIIRIPKQFLSDHNKMINKKKKKKAKITSSSSSSGIDLEVNGNNVDSYSSEQYPLRKCMHCEVTKTPQWRLGPMGPKTLCNACGVRYKS 262
BLAST of CF504684 vs. ExPASy Swiss-Prot
Match: GAT14_ARATH (GATA transcription factor 14 OS=Arabidopsis thaliana GN=At5g66320 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.702e-13 Identity = 31/44 (70.45%), Postives = 34/44 (77.27%), Query Frame = 3 Query: 141 TSEVGPTQAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKS 272 + E+ Q RKC HC + KTPQWRAGPMG KTLCNACGVRYKS Sbjct: 239 SGELQQLQPQRKCSHCGVQKTPQWRAGPMGAKTLCNACGVRYKS 282
BLAST of CF504684 vs. ExPASy Swiss-Prot
Match: GAT11_ARATH (GATA transcription factor 11 OS=Arabidopsis thaliana GN=GATA11 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.141e-13 Identity = 30/46 (65.22%), Postives = 34/46 (73.91%), Query Frame = 3 Query: 135 DETSEVGPTQAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKS 272 D + G + R+C+HC KTPQWR GPMGPKTLCNACGVRYKS Sbjct: 185 DMDVDCGESGGGRRCLHCATEKTPQWRTGPMGPKTLCNACGVRYKS 230
BLAST of CF504684 vs. ExPASy Swiss-Prot
Match: GATA6_ARATH (GATA transcription factor 6 OS=Arabidopsis thaliana GN=GATA6 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 8.020e-13 Identity = 29/35 (82.86%), Postives = 31/35 (88.57%), Query Frame = 3 Query: 168 VRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKS 272 VRKC HCE TKTPQWR GP GPKTLCNACGVR++S Sbjct: 219 VRKCTHCETTKTPQWREGPSGPKTLCNACGVRFRS 253
BLAST of CF504684 vs. ExPASy Swiss-Prot
Match: GAT13_ARATH (GATA transcription factor 13 OS=Arabidopsis thaliana GN=At5g25830 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.368e-12 Identity = 28/34 (82.35%), Postives = 30/34 (88.24%), Query Frame = 3 Query: 171 RKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKS 272 R+C+HC KTPQWR GPMGPKTLCNACGVRYKS Sbjct: 219 RRCLHCATDKTPQWRTGPMGPKTLCNACGVRYKS 252
BLAST of CF504684 vs. ExPASy Swiss-Prot
Match: GATA2_ARATH (GATA transcription factor 2 OS=Arabidopsis thaliana GN=GATA2 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.787e-12 Identity = 31/47 (65.96%), Postives = 36/47 (76.60%), Query Frame = 3 Query: 132 SDETSEVGPTQAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKS 272 S ET+E G +R+C HC KTPQWR GP+GPKTLCNACGVR+KS Sbjct: 169 SSETTEGG---GMRRCTHCASEKTPQWRTGPLGPKTLCNACGVRFKS 212
BLAST of CF504684 vs. ExPASy Swiss-Prot
Match: GATA1_ARATH (GATA transcription factor 1 OS=Arabidopsis thaliana GN=GATA1 PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 2.334e-12 Identity = 29/34 (85.29%), Postives = 29/34 (85.29%), Query Frame = 3 Query: 171 RKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKS 272 RKC HC KTPQWRAGP GPKTLCNACGVRYKS Sbjct: 194 RKCQHCGAEKTPQWRAGPAGPKTLCNACGVRYKS 227
BLAST of CF504684 vs. ExPASy Swiss-Prot
Match: GATA4_ARATH (GATA transcription factor 4 OS=Arabidopsis thaliana GN=GATA4 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.867e-12 Identity = 27/34 (79.41%), Postives = 29/34 (85.29%), Query Frame = 3 Query: 171 RKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKS 272 R+C HC KTPQWR GP+GPKTLCNACGVRYKS Sbjct: 158 RRCTHCASEKTPQWRTGPLGPKTLCNACGVRYKS 191
BLAST of CF504684 vs. ExPASy Swiss-Prot
Match: GATA9_ARATH (GATA transcription factor 9 OS=Arabidopsis thaliana GN=GATA9 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.158e-11 Identity = 35/66 (53.03%), Postives = 40/66 (60.61%), Query Frame = 3 Query: 75 QFNPEHXXXXXXXLSVPKVSDETSEVGPTQAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKS 272 QF E V K + +T TQ R+C HC + KTPQWRAGP+G KTLCNACGVRYKS Sbjct: 190 QFLDEPMTKTQKKKKVWKNAGQTQTQTQTQT-RQCGHCGVQKTPQWRAGPLGAKTLCNACGVRYKS 254
BLAST of CF504684 vs. ExPASy Swiss-Prot
Match: GATA5_ARATH (GATA transcription factor 5 OS=Arabidopsis thaliana GN=GATA5 PE=2 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.507e-11 Identity = 27/35 (77.14%), Postives = 28/35 (80.00%), Query Frame = 3 Query: 168 VRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKS 272 VR C HCE TPQWR GP GPKTLCNACGVR+KS Sbjct: 217 VRICTHCETITTPQWRQGPSGPKTLCNACGVRFKS 251 The following BLAST results are available for this feature:
BLAST of CF504684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504684 ID=CF504684; Name=CF504684; organism=Citrus sinensis; type=EST; length=273bpback to top |