CF504696
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF504696 vs. ExPASy Swiss-Prot
Match: RS52_ARATH (40S ribosomal protein S5-2 OS=Arabidopsis thaliana GN=RPS5B PE=1 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 2.000e-24 Identity = 54/74 (72.97%), Postives = 60/74 (81.08%), Query Frame = 3 Query: 66 MATAVVAQSQDPSQPHYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVER 287 MATA ++ +VKLFNRWT++DV V DISL DYIGVQAAKHAT+VPHTAGRYSVKRFRKAQCPIVER Sbjct: 1 MATAADVDAEIQQALTNEVKLFNRWTYDDVTVTDISLVDYIGVQAAKHATFVPHTAGRYSVKRFRKAQCPIVER 74
BLAST of CF504696 vs. ExPASy Swiss-Prot
Match: RS5_CICAR (40S ribosomal protein S5 (Fragment) OS=Cicer arietinum GN=RPS5 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 2.888e-23 Identity = 50/64 (78.12%), Postives = 58/64 (90.62%), Query Frame = 3 Query: 96 DPSQPHYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVER 287 DP+Q +VKLFNRW+F+DVQ++D+SL DYIGV +KHATYVPHTAGRYSVKRFRKAQCPIVER Sbjct: 3 DPTQ--IEVKLFNRWSFDDVQLSDVSLIDYIGVVPSKHATYVPHTAGRYSVKRFRKAQCPIVER 64
BLAST of CF504696 vs. ExPASy Swiss-Prot
Match: RS51_ARATH (40S ribosomal protein S5-1 OS=Arabidopsis thaliana GN=RPS5A PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 2.888e-23 Identity = 51/74 (68.92%), Postives = 59/74 (79.73%), Query Frame = 3 Query: 66 MATAVVAQSQDPSQPHYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVER 287 MA + ++ Q +VKLFNRW+F+DV V DISL DYIGVQ +KHAT+VPHTAGRYSVKRFRKAQCPIVER Sbjct: 1 MAASAEIDAEIQQQLTNEVKLFNRWSFDDVSVTDISLVDYIGVQPSKHATFVPHTAGRYSVKRFRKAQCPIVER 74
BLAST of CF504696 vs. ExPASy Swiss-Prot
Match: RS5_HUMAN (40S ribosomal protein S5 OS=Homo sapiens GN=RPS5 PE=1 SV=4) HSP 1 Score: 88.1965 bits (217), Expect = 1.388e-17 Identity = 43/72 (59.72%), Postives = 55/72 (76.39%), Query Frame = 3 Query: 72 TAVVAQSQDPSQPHYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVER 287 TA A ++ P D+KLF +W+ +DVQ+NDISL DYI V+ K+A Y+PH+AGRY+ KRFRKAQCPIVER Sbjct: 6 TAAPAVAETP-----DIKLFGKWSTDDVQINDISLQDYIAVKE-KYAKYLPHSAGRYAAKRFRKAQCPIVER 71
BLAST of CF504696 vs. ExPASy Swiss-Prot
Match: RS5_BOVIN (40S ribosomal protein S5 OS=Bos taurus GN=RPS5 PE=2 SV=3) HSP 1 Score: 88.1965 bits (217), Expect = 1.388e-17 Identity = 43/72 (59.72%), Postives = 55/72 (76.39%), Query Frame = 3 Query: 72 TAVVAQSQDPSQPHYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVER 287 TA A ++ P D+KLF +W+ +DVQ+NDISL DYI V+ K+A Y+PH+AGRY+ KRFRKAQCPIVER Sbjct: 6 TAAPAVAETP-----DIKLFGKWSTDDVQINDISLQDYIAVKE-KYAKYLPHSAGRYAAKRFRKAQCPIVER 71
BLAST of CF504696 vs. ExPASy Swiss-Prot
Match: RS5_MOUSE (40S ribosomal protein S5 OS=Mus musculus GN=Rps5 PE=2 SV=3) HSP 1 Score: 87.4261 bits (215), Expect = 2.368e-17 Identity = 39/57 (68.42%), Postives = 49/57 (85.96%), Query Frame = 3 Query: 117 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVER 287 D+KLF +W+ +DVQ+NDISL DYI V+ K+A Y+PH+AGRY+ KRFRKAQCPIVER Sbjct: 16 DIKLFGKWSTDDVQINDISLQDYIAVKE-KYAKYLPHSAGRYAAKRFRKAQCPIVER 71
BLAST of CF504696 vs. ExPASy Swiss-Prot
Match: RS5A_DROME (40S ribosomal protein S5a OS=Drosophila melanogaster GN=RpS5a PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.535e-16 Identity = 43/74 (58.11%), Postives = 55/74 (74.32%), Query Frame = 3 Query: 66 MATAVVAQSQDPSQPHYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVER 287 + T VV+ ++ P ++KLF RW+ +DV VNDISL DYI V+ K A Y+PH+AGRY+ KRFRKAQCPIVER Sbjct: 28 LETNVVSTTELP-----EIKLFGRWSCDDVTVNDISLQDYISVKE-KFARYLPHSAGRYAAKRFRKAQCPIVER 95
BLAST of CF504696 vs. ExPASy Swiss-Prot
Match: RS5_RAT (40S ribosomal protein S5 OS=Rattus norvegicus GN=Rps5 PE=2 SV=3) HSP 1 Score: 83.5741 bits (205), Expect = 3.419e-16 Identity = 41/72 (56.94%), Postives = 53/72 (73.61%), Query Frame = 3 Query: 72 TAVVAQSQDPSQPHYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVER 287 TA A ++ P D+KLF +W+ +DVQ+NDISL DYI V+ K+A Y+PH+AGRY+ FRKAQCPIVER Sbjct: 6 TATPAVAETP-----DIKLFGKWSTDDVQINDISLQDYIAVKE-KYAKYLPHSAGRYAANGFRKAQCPIVER 71
BLAST of CF504696 vs. ExPASy Swiss-Prot
Match: RS5_PODCA (40S ribosomal protein S5 OS=Podocoryne carnea GN=RPS5 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.617e-16 Identity = 37/57 (64.91%), Postives = 46/57 (80.70%), Query Frame = 3 Query: 117 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVER 287 D+KLF +W E + ++DISL+DYI V+ HA Y+PHTA RY+VKRFRKAQCPIVER Sbjct: 22 DIKLFGKWPLEGLNISDISLTDYIAVKD-NHAVYLPHTAARYAVKRFRKAQCPIVER 77
BLAST of CF504696 vs. ExPASy Swiss-Prot
Match: RS5_NEUCR (40S ribosomal protein S5 OS=Neurospora crassa GN=rps-5 PE=3 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 1.697e-15 Identity = 35/56 (62.50%), Postives = 47/56 (83.93%), Query Frame = 3 Query: 120 VKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVER 287 VKLFNRW++EDV++ DISL+DYI +++ Y+PH+AGRY+ KRFRKA CPI+ER Sbjct: 28 VKLFNRWSYEDVEIRDISLTDYIQIRSP---VYLPHSAGRYAAKRFRKANCPIIER 80 The following BLAST results are available for this feature:
BLAST of CF504696 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504696 ID=CF504696; Name=CF504696; organism=Citrus sinensis; type=EST; length=288bpback to top |