CF504700

Overview
NameCF504700
Unique NameCF504700
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length207
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13508 contig Csv1_Contig13508:68..274. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504700 vs. ExPASy Swiss-Prot
Match: CAMT2_POPTR (Caffeoyl-CoA O-methyltransferase 2 OS=Populus trichocarpa GN=CCOAOMT2 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.100e-21
Identity = 47/53 (88.68%), Postives = 49/53 (92.45%), Query Frame = 3
Query:    3 QNQQGRHQEVGHKSLLQSDALYQYILETSVYPREPESMKELRELTAKHPWLVV 161
            Q Q GRHQEVGHKSLLQSDALYQYILETSVYPREPE MKELRELTAKHPW ++
Sbjct:    9 QTQAGRHQEVGHKSLLQSDALYQYILETSVYPREPECMKELRELTAKHPWNIM 61          
BLAST of CF504700 vs. ExPASy Swiss-Prot
Match: CAMT_POPTM (Caffeoyl-CoA O-methyltransferase OS=Populus tremuloides PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 3.582e-21
Identity = 46/53 (86.79%), Postives = 50/53 (94.34%), Query Frame = 3
Query:    3 QNQQGRHQEVGHKSLLQSDALYQYILETSVYPREPESMKELRELTAKHPWLVV 161
            Q+Q GRHQEVGHKSLLQSDALYQYILETSVYPREPE MKELRE+TAKHPW ++
Sbjct:    9 QSQAGRHQEVGHKSLLQSDALYQYILETSVYPREPECMKELREVTAKHPWNIM 61          
BLAST of CF504700 vs. ExPASy Swiss-Prot
Match: CAMT_EUCGU (Caffeoyl-CoA O-methyltransferase OS=Eucalyptus gunnii PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 3.582e-21
Identity = 46/53 (86.79%), Postives = 49/53 (92.45%), Query Frame = 3
Query:    3 QNQQGRHQEVGHKSLLQSDALYQYILETSVYPREPESMKELRELTAKHPWLVV 161
            Q Q GRHQEVGHKSLLQSDALYQYILETSVYPREPE MKELRE+TAKHPW ++
Sbjct:    9 QTQAGRHQEVGHKSLLQSDALYQYILETSVYPREPEPMKELREITAKHPWNIM 61          
BLAST of CF504700 vs. ExPASy Swiss-Prot
Match: CAMT1_POPTR (Caffeoyl-CoA O-methyltransferase 1 OS=Populus trichocarpa GN=CCOAOMT1 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 3.582e-21
Identity = 46/53 (86.79%), Postives = 50/53 (94.34%), Query Frame = 3
Query:    3 QNQQGRHQEVGHKSLLQSDALYQYILETSVYPREPESMKELRELTAKHPWLVV 161
            Q+Q GRHQEVGHKSLLQSDALYQYILETSVYPREPE MKELRE+TAKHPW ++
Sbjct:    9 QSQAGRHQEVGHKSLLQSDALYQYILETSVYPREPECMKELREVTAKHPWNIM 61          
BLAST of CF504700 vs. ExPASy Swiss-Prot
Match: CAMT_VITVI (Caffeoyl-CoA O-methyltransferase OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.361e-20
Identity = 45/51 (88.24%), Postives = 49/51 (96.08%), Query Frame = 3
Query:    9 QQGRHQEVGHKSLLQSDALYQYILETSVYPREPESMKELRELTAKHPWLVV 161
            + GRHQEVGHKSLLQSDALYQYILETSVYPREPESMKELRELTA+HPW ++
Sbjct:    6 EAGRHQEVGHKSLLQSDALYQYILETSVYPREPESMKELRELTAQHPWNIM 56          
BLAST of CF504700 vs. ExPASy Swiss-Prot
Match: CAMT1_EUCGL (Caffeoyl-CoA O-methyltransferase 1 OS=Eucalyptus globulus GN=CCOMT PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.361e-20
Identity = 45/53 (84.91%), Postives = 49/53 (92.45%), Query Frame = 3
Query:    3 QNQQGRHQEVGHKSLLQSDALYQYILETSVYPREPESMKELRELTAKHPWLVV 161
            Q Q GRHQEVGHKSLLQSDALYQ+ILETSVYPREPE MKELRE+TAKHPW ++
Sbjct:    9 QTQAGRHQEVGHKSLLQSDALYQHILETSVYPREPEPMKELREITAKHPWNIM 61          
BLAST of CF504700 vs. ExPASy Swiss-Prot
Match: CAMT_SOLTU (Caffeoyl-CoA O-methyltransferase OS=Solanum tuberosum GN=CCOAOMT PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.778e-20
Identity = 44/48 (91.67%), Postives = 47/48 (97.92%), Query Frame = 3
Query:    9 QQGRHQEVGHKSLLQSDALYQYILETSVYPREPESMKELRELTAKHPW 152
            + GRHQEVGHKSLLQSDALYQYILETSVYPREPE+MKELRE+TAKHPW
Sbjct:    6 ENGRHQEVGHKSLLQSDALYQYILETSVYPREPEAMKELREITAKHPW 53          
BLAST of CF504700 vs. ExPASy Swiss-Prot
Match: CAMT3_TOBAC (Caffeoyl-CoA O-methyltransferase 3 OS=Nicotiana tabacum GN=CCOAOMT3 PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 2.322e-20
Identity = 44/51 (86.27%), Postives = 48/51 (94.12%), Query Frame = 3
Query:    9 QQGRHQEVGHKSLLQSDALYQYILETSVYPREPESMKELRELTAKHPWLVV 161
            + GRHQEVGHKSLLQSDALYQYILETSVYPREPE MKELRE+TAKHPW ++
Sbjct:    6 ENGRHQEVGHKSLLQSDALYQYILETSVYPREPEPMKELREITAKHPWNIM 56          
BLAST of CF504700 vs. ExPASy Swiss-Prot
Match: CAMT6_TOBAC (Caffeoyl-CoA O-methyltransferase 6 OS=Nicotiana tabacum GN=CCOAOMT6 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.032e-20
Identity = 45/50 (90.00%), Postives = 47/50 (94.00%), Query Frame = 3
Query:    3 QNQQGRHQEVGHKSLLQSDALYQYILETSVYPREPESMKELRELTAKHPW 152
            +NQ  +HQEVGHKSLLQSDALYQYILETSVYPREPE MKELRELTAKHPW
Sbjct:    9 ENQVTKHQEVGHKSLLQSDALYQYILETSVYPREPEPMKELRELTAKHPW 58          
BLAST of CF504700 vs. ExPASy Swiss-Prot
Match: CAMT4_TOBAC (Caffeoyl-CoA O-methyltransferase 4 OS=Nicotiana tabacum GN=CCOAOMT4 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.032e-20
Identity = 44/48 (91.67%), Postives = 46/48 (95.83%), Query Frame = 3
Query:    9 QQGRHQEVGHKSLLQSDALYQYILETSVYPREPESMKELRELTAKHPW 152
            + GRHQEVGHKSLLQSDALYQYILETSVYPREPE MKELRE+TAKHPW
Sbjct:    6 ENGRHQEVGHKSLLQSDALYQYILETSVYPREPEPMKELREITAKHPW 53          
The following BLAST results are available for this feature:
BLAST of CF504700 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
CAMT2_POPTR2.100e-2188.68Caffeoyl-CoA O-methyltransferase 2 OS=Populus tric... [more]
CAMT_POPTM3.582e-2186.79Caffeoyl-CoA O-methyltransferase OS=Populus tremul... [more]
CAMT_EUCGU3.582e-2186.79Caffeoyl-CoA O-methyltransferase OS=Eucalyptus gun... [more]
CAMT1_POPTR3.582e-2186.79Caffeoyl-CoA O-methyltransferase 1 OS=Populus tric... [more]
CAMT_VITVI1.361e-2088.24Caffeoyl-CoA O-methyltransferase OS=Vitis vinifera... [more]
CAMT1_EUCGL1.361e-2084.91Caffeoyl-CoA O-methyltransferase 1 OS=Eucalyptus g... [more]
CAMT_SOLTU1.778e-2091.67Caffeoyl-CoA O-methyltransferase OS=Solanum tubero... [more]
CAMT3_TOBAC2.322e-2086.27Caffeoyl-CoA O-methyltransferase 3 OS=Nicotiana ta... [more]
CAMT6_TOBAC3.032e-2090.00Caffeoyl-CoA O-methyltransferase 6 OS=Nicotiana ta... [more]
CAMT4_TOBAC3.032e-2091.67Caffeoyl-CoA O-methyltransferase 4 OS=Nicotiana ta... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-190 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-20_E06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504700 ID=CF504700; Name=CF504700; organism=Citrus sinensis; type=EST; length=207bp
AACAAAACCAACAAGGCAGACACCAGGAAGTTGGTCACAAGAGCCTGCTC
CAATCCGATGCCCTCTACCAGTATATTCTTGAAACCAGTGTGTACCCAAG
AGAGCCTGAATCAATGAAGGAGCTTAGAGAATTGACTGCCAAACATCCAT
GGTTGGTAGTTTAAATTCACTATTGTTTTGTATCACCTTCCAAAAATAAG
AAAAAAT
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