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Marker Overview
| Name | AX-160548920 |
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| dbSNP ID | N/A |
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| SNP Array ID | | Axiom Citrus HD Genotyping Array (Citrus15 AX1): | Affx-159874127 | | Axiom Citrus Genotyping Array: | Affx-159874127 |
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| Type | SNP |
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| SNP Alleles | C/T |
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| 5' Flanking Sequence | AGGAGAGTACATTCCTGCAAATCTTTCCCAGTACA |
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| 3' Flanking Sequence | GACAGTCAGCTCTGTTTGAACATATGGTAGCACTA |
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| Species | Citrus spp. |
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| Publication | [view all] |
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| Contact | Mikeal L. Roose
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| Associated With | GWAS0000034 |
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Publications
| Year | Publication |
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| 2022 | Mattia MR, Du D, Yu Q, Kahn T, Roose M, Hiraoka Y, Wang Y, Munoz P, Gmitter FG. Genome-Wide Association Study of Healthful Flavonoids among Diverse Mandarin Accessions.. Plants (Basel, Switzerland). 2022 Jan 25; 11(3). |
| 2024 | Hiraoka Y, Ferrante SP, Wu GA, Federici CT, Roose ML. Development and Assessment of SNP Genotyping Arrays for Citrus and Its Close Relatives.. Plants (Basel, Switzerland). 2024 Feb 29; 13(5). |
Sequence
>AX-160548920 ID=AX-160548920; Name=AX-160548920; organism=Citrus spp.; type=genetic_marker; length=71bp
AGGAGAGTACATTCCTGCAAATCTTTCCCAGTACAYGACAGTCAGCTCTG
TTTGAACATATGGTAGCACTA
Annotated Terms
The
following terms have been associated with
this genetic_marker:
Vocabulary: Citrus Trait Ontology
| Term | Definition |
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| 66:Didymin concentration | Didymin concentration |
| 66:Limonin concentration | Limonin concentration |
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