CF510169

Overview
NameCF510169
Unique NameCF510169
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length230
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1053 contig Csv1_Contig1053:78..307. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF510169 vs. ExPASy Swiss-Prot
Match: BTF3_MOUSE (Transcription factor BTF3 OS=Mus musculus GN=Btf3 PE=2 SV=3)

HSP 1 Score: 77.411 bits (189), Expect = 2.517e-14
Identity = 37/58 (63.79%), Postives = 44/58 (75.86%), Query Frame = 2
Query:   56 MNVEKLMKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVN 229
            MN EKL K+   VR GGKG+ RRKKK VH+T T DDK+LQ +LK++GVN I  IEEVN
Sbjct:   48 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVN 105          
BLAST of CF510169 vs. ExPASy Swiss-Prot
Match: BTF3_HUMAN (Transcription factor BTF3 OS=Homo sapiens GN=BTF3 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.517e-14
Identity = 37/58 (63.79%), Postives = 44/58 (75.86%), Query Frame = 2
Query:   56 MNVEKLMKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVN 229
            MN EKL K+   VR GGKG+ RRKKK VH+T T DDK+LQ +LK++GVN I  IEEVN
Sbjct:   50 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVN 107          
BLAST of CF510169 vs. ExPASy Swiss-Prot
Match: BT3L4_XENTR (Transcription factor BTF3 homolog 4 OS=Xenopus tropicalis GN=btf3l4 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.517e-14
Identity = 37/58 (63.79%), Postives = 44/58 (75.86%), Query Frame = 2
Query:   56 MNVEKLMKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVN 229
            MN EKL K+   VR GGKG+ RRKKK VH+T T DDK+LQS+LK++ VN I  IEEVN
Sbjct:    1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVN 58          
BLAST of CF510169 vs. ExPASy Swiss-Prot
Match: BT3L4_XENLA (Transcription factor BTF3 homolog 4 OS=Xenopus laevis GN=btf3l4 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.517e-14
Identity = 37/58 (63.79%), Postives = 44/58 (75.86%), Query Frame = 2
Query:   56 MNVEKLMKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVN 229
            MN EKL K+   VR GGKG+ RRKKK VH+T T DDK+LQS+LK++ VN I  IEEVN
Sbjct:    1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVN 58          
BLAST of CF510169 vs. ExPASy Swiss-Prot
Match: BT3L4_PONAB (Transcription factor BTF3 homolog 4 OS=Pongo abelii GN=BTF3L4 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.517e-14
Identity = 37/58 (63.79%), Postives = 44/58 (75.86%), Query Frame = 2
Query:   56 MNVEKLMKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVN 229
            MN EKL K+   VR GGKG+ RRKKK VH+T T DDK+LQS+LK++ VN I  IEEVN
Sbjct:    1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVN 58          
BLAST of CF510169 vs. ExPASy Swiss-Prot
Match: BT3L4_MOUSE (Transcription factor BTF3 homolog 4 OS=Mus musculus GN=Btf3l4 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.517e-14
Identity = 37/58 (63.79%), Postives = 44/58 (75.86%), Query Frame = 2
Query:   56 MNVEKLMKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVN 229
            MN EKL K+   VR GGKG+ RRKKK VH+T T DDK+LQS+LK++ VN I  IEEVN
Sbjct:    1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVN 58          
BLAST of CF510169 vs. ExPASy Swiss-Prot
Match: BT3L4_HUMAN (Transcription factor BTF3 homolog 4 OS=Homo sapiens GN=BTF3L4 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.517e-14
Identity = 37/58 (63.79%), Postives = 44/58 (75.86%), Query Frame = 2
Query:   56 MNVEKLMKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVN 229
            MN EKL K+   VR GGKG+ RRKKK VH+T T DDK+LQS+LK++ VN I  IEEVN
Sbjct:    1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVN 58          
BLAST of CF510169 vs. ExPASy Swiss-Prot
Match: BT3L4_CHICK (Transcription factor BTF3 homolog 4 OS=Gallus gallus GN=BTF3L4 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.517e-14
Identity = 37/58 (63.79%), Postives = 44/58 (75.86%), Query Frame = 2
Query:   56 MNVEKLMKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVN 229
            MN EKL K+   VR GGKG+ RRKKK VH+T T DDK+LQS+LK++ VN I  IEEVN
Sbjct:    1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVN 58          
BLAST of CF510169 vs. ExPASy Swiss-Prot
Match: BT3L4_BOVIN (Transcription factor BTF3 homolog 4 OS=Bos taurus GN=BTF3L4 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.517e-14
Identity = 37/58 (63.79%), Postives = 44/58 (75.86%), Query Frame = 2
Query:   56 MNVEKLMKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVN 229
            MN EKL K+   VR GGKG+ RRKKK VH+T T DDK+LQS+LK++ VN I  IEEVN
Sbjct:    1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVN 58          
BLAST of CF510169 vs. ExPASy Swiss-Prot
Match: BT3L4_DANRE (Transcription factor BTF3 homolog 4 OS=Danio rerio GN=btf3l4 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.608e-14
Identity = 37/58 (63.79%), Postives = 44/58 (75.86%), Query Frame = 2
Query:   56 MNVEKLMKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVN 229
            MN EKL K+   VR GGKG+ RRKKK VH+T T DDK+LQS+LK++ VN I  IEEVN
Sbjct:    1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLVVNNIAGIEEVN 58          
The following BLAST results are available for this feature:
BLAST of CF510169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
BTF3_MOUSE2.517e-1463.79Transcription factor BTF3 OS=Mus musculus GN=Btf3 ... [more]
BTF3_HUMAN2.517e-1463.79Transcription factor BTF3 OS=Homo sapiens GN=BTF3 ... [more]
BT3L4_XENTR2.517e-1463.79Transcription factor BTF3 homolog 4 OS=Xenopus tro... [more]
BT3L4_XENLA2.517e-1463.79Transcription factor BTF3 homolog 4 OS=Xenopus lae... [more]
BT3L4_PONAB2.517e-1463.79Transcription factor BTF3 homolog 4 OS=Pongo abeli... [more]
BT3L4_MOUSE2.517e-1463.79Transcription factor BTF3 homolog 4 OS=Mus musculu... [more]
BT3L4_HUMAN2.517e-1463.79Transcription factor BTF3 homolog 4 OS=Homo sapien... [more]
BT3L4_CHICK2.517e-1463.79Transcription factor BTF3 homolog 4 OS=Gallus gall... [more]
BT3L4_BOVIN2.517e-1463.79Transcription factor BTF3 homolog 4 OS=Bos taurus ... [more]
BT3L4_DANRE5.608e-1463.79Transcription factor BTF3 homolog 4 OS=Danio rerio... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-684 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-9_A03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510169 ID=CF510169; Name=CF510169; organism=Citrus sinensis; type=EST; length=230bp
CTTATCTTCCTCTTCACCAAATTCTTTGTCCCCACACAAAAACCCTAGCT
CCAAGATGAATGTGGAGAAGCTAATGAAGATGGCCGGTGCAGTTCGCACC
GGTGGTAAGGGTAGTGTGAGAAGAAAGAAGAAGGCTGTTCATAAGACAAC
AACCACCGATGACAAGAGGCTTCAGAGCACCTTGAAGAGAATAGGAGTGA
ATGCTATTCCTGCAATTGAGGAAGTTAACA
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