CF510173

Overview
NameCF510173
Unique NameCF510173
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length331
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13176 contig Csv1_Contig13176:534..864. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF510173 vs. ExPASy Swiss-Prot
Match: INO1_CITPA (Inositol-3-phosphate synthase OS=Citrus paradisi PE=3 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 1.074e-57
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 3
Query:    3 YFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQGSRANNVIKGTKKEQMLQI 329
            YFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQGSRANNVIKGTKKEQMLQI
Sbjct:  101 YFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQGSRANNVIKGTKKEQMLQI 209          
BLAST of CF510173 vs. ExPASy Swiss-Prot
Match: INO1_NICPA (Inositol-3-phosphate synthase OS=Nicotiana paniculata GN=INPS1 PE=2 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 1.111e-54
Identity = 102/109 (93.58%), Postives = 107/109 (98.17%), Query Frame = 3
Query:    3 YFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQGSRANNVIKGTKKEQMLQI 329
            YFGSLTQAS IRVGS+NGEEIYAPFKS+LPMVNPDD+VFGGWDISDMNLADAMARA+VFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQGSRANNVIKGTKKEQ+ QI
Sbjct:  101 YFGSLTQASTIRVGSFNGEEIYAPFKSLLPMVNPDDVVFGGWDISDMNLADAMARAKVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQGSRANNVIKGTKKEQIDQI 209          
BLAST of CF510173 vs. ExPASy Swiss-Prot
Match: INO1_TOBAC (Inositol-3-phosphate synthase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 7.203e-54
Identity = 101/109 (92.66%), Postives = 106/109 (97.25%), Query Frame = 3
Query:    3 YFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQGSRANNVIKGTKKEQMLQI 329
            YFGSLTQAS IRVGS+NGEEIYAPFKS+LPMVNPDD+VFGGWDIS MNLADAMARA+VFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQGSRANNVIKGTKKEQ+ QI
Sbjct:  101 YFGSLTQASTIRVGSFNGEEIYAPFKSLLPMVNPDDVVFGGWDISGMNLADAMARAKVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQGSRANNVIKGTKKEQIDQI 209          
BLAST of CF510173 vs. ExPASy Swiss-Prot
Match: INO1_WHEAT (Inositol-3-phosphate synthase OS=Triticum aestivum GN=MIPS PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 9.407e-54
Identity = 101/109 (92.66%), Postives = 106/109 (97.25%), Query Frame = 3
Query:    3 YFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQGSRANNVIKGTKKEQMLQI 329
            YFGSLTQAS+IRVGSYNGEEIYAPFKS+LPMVNPDD+VFGGWDISDMNLADAMARARV DIDLQKQLRPYME MVPLPGIYDPDFIAANQGSRAN+VIKGTKKEQ+ QI
Sbjct:  101 YFGSLTQASSIRVGSYNGEEIYAPFKSLLPMVNPDDVVFGGWDISDMNLADAMARARVLDIDLQKQLRPYMEHMVPLPGIYDPDFIAANQGSRANSVIKGTKKEQVDQI 209          
BLAST of CF510173 vs. ExPASy Swiss-Prot
Match: INO1_MESCR (Inositol-3-phosphate synthase OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 1.229e-53
Identity = 99/109 (90.83%), Postives = 106/109 (97.25%), Query Frame = 3
Query:    3 YFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQGSRANNVIKGTKKEQMLQI 329
            YFGSLTQAS+IRVGS+NGEEIYAPFKS+LPMVNPDD+VFGGWDISDMNLADAM RARVFDIDLQKQLRPYME MVPLPGIYDPDFIAANQGSRANNVIKGTKKEQ+ ++
Sbjct:  103 YFGSLTQASSIRVGSFNGEEIYAPFKSLLPMVNPDDVVFGGWDISDMNLADAMTRARVFDIDLQKQLRPYMEHMVPLPGIYDPDFIAANQGSRANNVIKGTKKEQVERV 211          
BLAST of CF510173 vs. ExPASy Swiss-Prot
Match: INO1_ORYSJ (Inositol-3-phosphate synthase OS=Oryza sativa subsp. japonica GN=INO1 PE=2 SV=2)

HSP 1 Score: 207.608 bits (527), Expect = 1.605e-53
Identity = 100/109 (91.74%), Postives = 105/109 (96.33%), Query Frame = 3
Query:    3 YFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQGSRANNVIKGTKKEQMLQI 329
            Y+GSLTQAS IRVGSYNGEEIYAPFKS+LPMVNPDD+VFGGWDIS+MNLADAM RA+V DIDLQKQLRPYMESMVPLPGIYDPDFIAANQGSRANNVIKGTKKEQM QI
Sbjct:  101 YYGSLTQASTIRVGSYNGEEIYAPFKSLLPMVNPDDLVFGGWDISNMNLADAMTRAKVLDIDLQKQLRPYMESMVPLPGIYDPDFIAANQGSRANNVIKGTKKEQMEQI 209          
BLAST of CF510173 vs. ExPASy Swiss-Prot
Match: INO1_HORVU (Inositol-3-phosphate synthase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 4.669e-53
Identity = 99/109 (90.83%), Postives = 103/109 (94.50%), Query Frame = 3
Query:    3 YFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQGSRANNVIKGTKKEQMLQI 329
            YFGSLTQAS IRVGSYNGEEIYAPFKS+LPMVNPDD+VFGGWDIS MNLADAM RA+V DIDLQKQLRPYMESM PLPGIYDPDFIAANQGSRANNVIKGTKKEQM Q+
Sbjct:  101 YFGSLTQASTIRVGSYNGEEIYAPFKSLLPMVNPDDLVFGGWDISSMNLADAMTRAKVLDIDLQKQLRPYMESMCPLPGIYDPDFIAANQGSRANNVIKGTKKEQMEQV 209          
BLAST of CF510173 vs. ExPASy Swiss-Prot
Match: INO2_ARATH (Inositol-3-phosphate synthase isozyme 2 OS=Arabidopsis thaliana GN=At2g22240 PE=2 SV=2)

HSP 1 Score: 205.297 bits (521), Expect = 7.964e-53
Identity = 97/106 (91.51%), Postives = 105/106 (99.06%), Query Frame = 3
Query:    3 YFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQGSRANNVIKGTKKEQM 320
            YFGSLTQAS+IRVGSYNGEEIYAPFKS+LPMVNP+D+VFGGWDISDMNLADAMARARV DIDLQKQLRPYME+M+PLPGIYDPDFIAANQGSRAN+VIKGTKKEQ+
Sbjct:  101 YFGSLTQASSIRVGSYNGEEIYAPFKSLLPMVNPEDVVFGGWDISDMNLADAMARARVLDIDLQKQLRPYMENMIPLPGIYDPDFIAANQGSRANSVIKGTKKEQV 206          
BLAST of CF510173 vs. ExPASy Swiss-Prot
Match: INO1_SESIN (Inositol-3-phosphate synthase OS=Sesamum indicum PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 1.040e-52
Identity = 98/109 (89.91%), Postives = 105/109 (96.33%), Query Frame = 3
Query:    3 YFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQGSRANNVIKGTKKEQMLQI 329
            YFGSLTQAS+IRVGS+NGEEIYAPFKS+LPMVNPDD+VFGGWDIS+MNLADAM RA+V DIDLQKQLRPYME MVPLPGIYDPDFIAANQGSRANNVIKGTKKEQ+ QI
Sbjct:  101 YFGSLTQASSIRVGSFNGEEIYAPFKSLLPMVNPDDVVFGGWDISNMNLADAMGRAKVLDIDLQKQLRPYMEHMVPLPGIYDPDFIAANQGSRANNVIKGTKKEQVQQI 209          
BLAST of CF510173 vs. ExPASy Swiss-Prot
Match: INO1_MAIZE (Inositol-3-phosphate synthase OS=Zea mays PE=2 SV=2)

HSP 1 Score: 203.756 bits (517), Expect = 2.317e-52
Identity = 98/109 (89.91%), Postives = 105/109 (96.33%), Query Frame = 3
Query:    3 YFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQGSRANNVIKGTKKEQMLQI 329
            Y+GSLTQAS IRVGSYNGEEIYAPFKS+LPMVNPDDIVFGGWDIS+MNLAD+M RA+V DIDLQKQLRPYMESMVPLPGIYDPDFIAANQGSRAN+VIKGTKKEQ+ QI
Sbjct:  101 YYGSLTQASTIRVGSYNGEEIYAPFKSLLPMVNPDDIVFGGWDISNMNLADSMTRAKVLDIDLQKQLRPYMESMVPLPGIYDPDFIAANQGSRANSVIKGTKKEQVEQI 209          
The following BLAST results are available for this feature:
BLAST of CF510173 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
INO1_CITPA1.074e-57100.00Inositol-3-phosphate synthase OS=Citrus paradisi P... [more]
INO1_NICPA1.111e-5493.58Inositol-3-phosphate synthase OS=Nicotiana panicul... [more]
INO1_TOBAC7.203e-5492.66Inositol-3-phosphate synthase OS=Nicotiana tabacum... [more]
INO1_WHEAT9.407e-5492.66Inositol-3-phosphate synthase OS=Triticum aestivum... [more]
INO1_MESCR1.229e-5390.83Inositol-3-phosphate synthase OS=Mesembryanthemum ... [more]
INO1_ORYSJ1.605e-5391.74Inositol-3-phosphate synthase OS=Oryza sativa subs... [more]
INO1_HORVU4.669e-5390.83Inositol-3-phosphate synthase OS=Hordeum vulgare P... [more]
INO2_ARATH7.964e-5391.51Inositol-3-phosphate synthase isozyme 2 OS=Arabido... [more]
INO1_SESIN1.040e-5289.91Inositol-3-phosphate synthase OS=Sesamum indicum P... [more]
INO1_MAIZE2.317e-5289.91Inositol-3-phosphate synthase OS=Zea mays PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-688 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-9_A08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510173 ID=CF510173; Name=CF510173; organism=Citrus sinensis; type=EST; length=331bp
ATTATTTTGGTTCACTTACCCAAGCATCAGCAATTAGAGTTGGGTCTTAC
AATGGAGAGGAGATTTATGCTCCATTCAAGAGCATTCTCCCTATGGTGAA
CCCAGATGACATTGTGTTTGGAGGATGGGACATTAGTGACATGAACTTGG
CTGATGCCATGGCCAGGGCTAGAGTGTTTGATATTGATCTTCAAAAGCAA
CTTAGGCCTTACATGGAATCAATGGTCCCACTTCCTGGAATCTATGACCC
TGATTTCATTGCTGCCAATCAAGGGTCGCGTGCCAACAACGTGATCAAAG
GAACCAAGAAAGAACAAATGCTACAAATCAT
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