CF510178
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF510178 vs. ExPASy Swiss-Prot
Match: DMC1_SOYBN (Meiotic recombination protein DMC1 homolog OS=Glycine max PE=2 SV=1) HSP 1 Score: 249.595 bits (636), Expect = 3.656e-66 Identity = 124/128 (96.88%), Postives = 125/128 (97.66%), Query Frame = 1 Query: 4 ATTEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGELADRQQKLGQM 387 A TEAFGEFRSGKTQLAHTLCV TQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDF+GRGELADRQQKL QM Sbjct: 128 AITEAFGEFRSGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFSGRGELADRQQKLAQM 255
BLAST of CF510178 vs. ExPASy Swiss-Prot
Match: DMC1_ARATH (Meiotic recombination protein DMC1 homolog OS=Arabidopsis thaliana GN=LIM15 PE=1 SV=2) HSP 1 Score: 248.825 bits (634), Expect = 6.237e-66 Identity = 122/128 (95.31%), Postives = 125/128 (97.66%), Query Frame = 1 Query: 4 ATTEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGELADRQQKLGQM 387 A TEAFGEFRSGKTQLAHTLCV TQLPTNM+GGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFR+LIVDS+IALFRVDFTGRGELADRQQKL QM Sbjct: 127 AITEAFGEFRSGKTQLAHTLCVTTQLPTNMKGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRILIVDSIIALFRVDFTGRGELADRQQKLAQM 254
BLAST of CF510178 vs. ExPASy Swiss-Prot
Match: DMC1_LILLO (Meiotic recombination protein DMC1 homolog OS=Lilium longiflorum GN=LIM15 PE=2 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 4.625e-61 Identity = 115/126 (91.27%), Postives = 119/126 (94.44%), Query Frame = 1 Query: 10 TEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGELADRQQKLGQM 387 TEAFGEFRSGKTQ+AHTLCV TQLP +M GGNGKVAYIDTEGTFRPDRIVPIAERFGMD AVLDNIIYARAYTYEHQYNLLL LAAKMSEEPFRLLIVDSVIALFRVDF+GRGELA+RQQKL QM Sbjct: 134 TEAFGEFRSGKTQIAHTLCVSTQLPVSMHGGNGKVAYIDTEGTFRPDRIVPIAERFGMDASAVLDNIIYARAYTYEHQYNLLLALAAKMSEEPFRLLIVDSVIALFRVDFSGRGELAERQQKLAQM 259
BLAST of CF510178 vs. ExPASy Swiss-Prot
Match: DMC1_MOUSE (Meiotic recombination protein DMC1/LIM15 homolog OS=Mus musculus GN=Dmc1 PE=1 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 1.399e-41 Identity = 86/130 (66.15%), Postives = 102/130 (78.46%), Query Frame = 1 Query: 4 ATTEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEP--FRLLIVDSVIALFRVDFTGRGELADRQQKLGQM 387 A TEAFGEFR+GKTQL+HTLCV QLP GK+ +IDTE TFRPDR+ IA+RF +D AVLDN++YARAYT EHQ LL +AAK EE F+LLI+DS++ALFRVDF+GRGELA+RQQKL QM Sbjct: 120 AITEAFGEFRTGKTQLSHTLCVTAQLPGTGGYSGGKIIFIDTENTFRPDRLRDIADRFNVDHEAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFKLLIIDSIMALFRVDFSGRGELAERQQKLAQM 249
BLAST of CF510178 vs. ExPASy Swiss-Prot
Match: DLH1_CANAL (Meiotic recombination protein DLH1 OS=Candida albicans GN=DLH1 PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 2.386e-41 Identity = 83/125 (66.40%), Postives = 97/125 (77.60%), Query Frame = 1 Query: 10 TEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGELADRQQKLGQ 384 TE FGEFR GKTQL HTLCV QLPT+M GG G+VAYIDTEGTFRPDRI IAER+G+D L+NI YARA EHQ L+ L +++E FRLLIVDS++A FRVD++GRGEL +RQQKL Q Sbjct: 108 TEVFGEFRCGKTQLCHTLCVAAQLPTDMGGGEGRVAYIDTEGTFRPDRIRSIAERYGVDADICLENISYARALNSEHQIELVEQLGNELAEGTFRLLIVDSIMACFRVDYSGRGELNERQQKLNQ 232
BLAST of CF510178 vs. ExPASy Swiss-Prot
Match: DMC1_HUMAN (Meiotic recombination protein DMC1/LIM15 homolog OS=Homo sapiens GN=DMC1 PE=1 SV=2) HSP 1 Score: 166.777 bits (421), Expect = 3.117e-41 Identity = 86/130 (66.15%), Postives = 102/130 (78.46%), Query Frame = 1 Query: 4 ATTEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEP--FRLLIVDSVIALFRVDFTGRGELADRQQKLGQM 387 A TEAFGEFR+GKTQL+HTLCV QLP GK+ +IDTE TFRPDR+ IA+RF +D AVLDN++YARAYT EHQ LL +AAK EE F+LLI+DS++ALFRVDF+GRGELA+RQQKL QM Sbjct: 120 AITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPDRLRDIADRFNVDHDAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFKLLIIDSIMALFRVDFSGRGELAERQQKLAQM 249
BLAST of CF510178 vs. ExPASy Swiss-Prot
Match: DMC1_YEAST (Meiotic recombination protein DMC1 OS=Saccharomyces cerevisiae GN=DMC1 PE=1 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 8.488e-39 Identity = 77/125 (61.60%), Postives = 95/125 (76.00%), Query Frame = 1 Query: 10 TEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGELADRQQKLGQ 384 TE FGEFR GKTQ++HTLCV TQLP M GG GKVAYIDTEGTFRP+RI IAE + +DP + L N+ YARA EHQ L+ L ++S +RL++VDS++A FRVD+ GRGEL++RQQKL Q Sbjct: 117 TEVFGEFRCGKTQMSHTLCVTTQLPREMGGGEGKVAYIDTEGTFRPERIKQIAEGYELDPESCLANVSYARALNSEHQMELVEQLGEELSSGDYRLIVVDSIMANFRVDYCGRGELSERQQKLNQ 241
BLAST of CF510178 vs. ExPASy Swiss-Prot
Match: DMC1_SCHPO (Meiotic recombination protein dmc1 OS=Schizosaccharomyces pombe GN=dmc1 PE=1 SV=2) HSP 1 Score: 155.992 bits (393), Expect = 5.502e-38 Identity = 78/127 (61.42%), Postives = 96/127 (75.59%), Query Frame = 1 Query: 10 TEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEE-PFRLLIVDSVIALFRVDFTGRGELADRQQKLGQM 387 TE FGEFR GKTQ++HTLCV QLP +M G GKVA+IDTEGTFRPDRI IAERFG+D ++NII +RAY E Q + L +E+ +RLLIVDS++ALFRVD++GRGEL++RQQKL M Sbjct: 116 TEVFGEFRCGKTQMSHTLCVTAQLPRDMGGAEGKVAFIDTEGTFRPDRIKAIAERFGVDADQAMENIIVSRAYNSEQQMEYITKLGTIFAEDGQYRLLIVDSIMALFRVDYSGRGELSERQQKLNIM 242
BLAST of CF510178 vs. ExPASy Swiss-Prot
Match: RAD51_YEAST (DNA repair protein RAD51 OS=Saccharomyces cerevisiae GN=RAD51 PE=1 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 1.226e-37 Identity = 75/128 (58.59%), Postives = 94/128 (73.44%), Query Frame = 1 Query: 1 GATTEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGELADRQQKLGQ 384 G+ TE FGEFR+GK+QL HTL V Q+P ++ GG GK YIDTEGTFRP R+V IA+RFG+DP L+N+ YARAY +HQ LL A MSE F L++VDSV+AL+R DF+GRGEL+ RQ L + Sbjct: 178 GSITELFGEFRTGKSQLCHTLAVTCQIPLDIGGGEGKCLYIDTEGTFRPVRLVSIAQRFGLDPDDALNNVAYARAYNADHQLRLLDAAAQMMSESRFSLIVVDSVMALYRTDFSGRGELSARQMHLAK 305
BLAST of CF510178 vs. ExPASy Swiss-Prot
Match: RAD51_ARATH (DNA repair protein RAD51 homolog 1 OS=Arabidopsis thaliana GN=RAD51 PE=1 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 1.601e-37 Identity = 76/128 (59.38%), Postives = 92/128 (71.88%), Query Frame = 1 Query: 1 GATTEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGELADRQQKLGQ 384 G+ TE +GEFRSGKTQL HTLCV QLP + GG GK YID EGTFRP R++ IA+RFG++ VL+N+ YARAY +HQ LLL A+ M E F LLIVDS AL+R DF+GRGEL+ RQ L + Sbjct: 123 GSITELYGEFRSGKTQLCHTLCVTCQLPMDQGGGEGKAMYIDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAYNTDHQSRLLLEAASMMIETRFALLIVDSATALYRTDFSGRGELSARQMHLAK 250 The following BLAST results are available for this feature:
BLAST of CF510178 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 76
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Sequences
The
following sequences are available for this feature:
EST sequence >CF510178 ID=CF510178; Name=CF510178; organism=Citrus sinensis; type=EST; length=389bpback to top |