CF510184

Overview
NameCF510184
Unique NameCF510184
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length279
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510184 vs. ExPASy Swiss-Prot
Match: PPA29_ARATH (Probable inactive purple acid phosphatase 29 OS=Arabidopsis thaliana GN=PAP29 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 2.470e-29
Identity = 60/92 (65.22%), Postives = 68/92 (73.91%), Query Frame = 3
Query:    3 QRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFT-GVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLLLWWGF 275
            +R Y +KP  Q+  APGL YFHIPLPEF  FD  N T GVRQEG S+AS NSGFFTT++A GDVK+VF GHDHVNDFCG L G+ L    GF
Sbjct:  233 KREYNAKPNPQEGIAPGLAYFHIPLPEFLSFDSKNATKGVRQEGTSAASTNSGFFTTLIARGDVKSVFVGHDHVNDFCGELKGLNLCYGGGF 324          

HSP 2 Score: 23.8682 bits (50), Expect = 2.470e-29
Identity = 8/9 (88.89%), Postives = 8/9 (88.89%), Query Frame = 1
Query:  253 NSCYGGGFG 279
            N CYGGGFG
Sbjct:  317 NLCYGGGFG 325          
BLAST of CF510184 vs. ExPASy Swiss-Prot
Match: PPA14_ARATH (Probable inactive purple acid phosphatase 14 OS=Arabidopsis thaliana GN=PAP14 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 5.503e-22
Identity = 49/79 (62.03%), Postives = 57/79 (72.15%), Query Frame = 3
Query:   24 PAAQKAPAPGLVYFHIPLPEFAYFDQSN-FTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQL 257
            P  Q + APGLVY HIP+PEFA F++S   TGVRQE   S  +NSGFFT +V  G+VK VF+GHDHVNDFC  L GI L
Sbjct:  242 PFPQNSTAPGLVYLHIPMPEFALFNKSTEMTGVRQESTCSPPINSGFFTKLVERGEVKGVFSGHDHVNDFCAELHGINL 320          
BLAST of CF510184 vs. ExPASy Swiss-Prot
Match: PPA28_ARATH (Probable inactive purple acid phosphatase 28 OS=Arabidopsis thaliana GN=PAP28 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.954e-14
Identity = 36/76 (47.37%), Postives = 45/76 (59.21%), Query Frame = 3
Query:   48 PGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLLLWWGF 275
            P L +FHIP+ E      + F G  QEG++ + V SG   T V+ G+VKA F GHDHVNDFCG L G+      GF
Sbjct:  260 PALAFFHIPILEVRELWYTPFIGQFQEGVACSIVQSGVLQTFVSMGNVKAAFMGHDHVNDFCGTLKGVWFCYGGGF 335          

HSP 2 Score: 22.3274 bits (46), Expect = 2.954e-14
Identity = 7/7 (100.00%), Postives = 7/7 (100.00%), Query Frame = 1
Query:  259 CYGGGFG 279
            CYGGGFG
Sbjct:  330 CYGGGFG 336          
The following BLAST results are available for this feature:
BLAST of CF510184 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
PPA29_ARATH2.470e-2965.22Probable inactive purple acid phosphatase 29 OS=Ar... [more]
PPA14_ARATH5.503e-2262.03Probable inactive purple acid phosphatase 14 OS=Ar... [more]
PPA28_ARATH2.954e-1447.37Probable inactive purple acid phosphatase 28 OS=Ar... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-699 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-9_B08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510184 ID=CF510184; Name=CF510184; organism=Citrus sinensis; type=EST; length=279bp
TGCAGAGGGCATACATGAGCAAGCCAGCAGCTCAGAAAGCACCTGCACCA
GGGCTGGTTTACTTTCACATCCCATTGCCTGAATTTGCATATTTTGATCA
ATCAAACTTCACAGGTGTGAGGCAAGAAGGCATAAGCTCTGCTTCTGTGA
ACTCAGGCTTCTTCACAACCATGGTTGCAGCAGGGGATGTGAAGGCTGTT
TTCACAGGCCATGATCATGTCAATGATTTCTGTGGCCGGCTTACTGGTAT
ACAACTCCTGTTATGGTGGGGGTTTTGGA
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