CF510189

Overview
NameCF510189
Unique NameCF510189
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length285
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: FYPP_PEA (Phytochrome-associated serine/threonine protein phosphatase OS=Pisum sativum GN=FYPP PE=1 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 1.469e-51
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 1 
Query:    1 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK
Sbjct:   35 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 129
[Close]
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: FYPP3_ARATH (Phytochrome-associated serine/threonine protein phosphatase 3 OS=Arabidopsis thaliana GN=FYPP3 PE=1 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 3.274e-51
Identity = 94/95 (98.95%), Postives = 95/95 (100.00%), Query Frame = 1 
Query:    1 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVP+TNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK
Sbjct:   35 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPDTNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 129
[Close]
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: FYPP1_ARATH (Phytochrome-associated serine/threonine protein phosphatase 1 OS=Arabidopsis thaliana GN=FYPP1 PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 5.584e-51
Identity = 94/95 (98.95%), Postives = 95/95 (100.00%), Query Frame = 1 
Query:    1 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKAR+PANITLLRGNHESRQLTQVYGFYDECQRK
Sbjct:   35 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARHPANITLLRGNHESRQLTQVYGFYDECQRK 129
[Close]
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PPP6_DICDI (Serine/threonine-protein phosphatase 6 catalytic subunit OS=Dictyostelium discoideum GN=ppp6c PE=2 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 9.547e-43
Identity = 78/95 (82.11%), Postives = 87/95 (91.58%), Query Frame = 1 
Query:    1 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            ESNVQPV SPVT+CGDIHGQF+DL++LF+TGG VP+TNY+FMGDFVDRGY SLE FT LL LKARYP  ITLLRGNHESRQ+TQVYGFYDECQ+K
Sbjct:   39 ESNVQPVRSPVTICGDIHGQFYDLLELFKTGGEVPDTNYVFMGDFVDRGYYSLETFTYLLALKARYPDKITLLRGNHESRQITQVYGFYDECQQK 133
[Close]
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PPP6_RAT (Serine/threonine-protein phosphatase 6 catalytic subunit OS=Rattus norvegicus GN=Ppp6c PE=2 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 3.071e-41
Identity = 77/95 (81.05%), Postives = 86/95 (90.53%), Query Frame = 1 
Query:    1 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            ESNVQPV++PVTVCGDIHGQF+DL +LF+TGG VP+TNYIFMGDFVDRGY SLE FT LL LKA++P  ITLLRGNHESRQ+TQVYGFYDECQ K
Sbjct:   38 ESNVQPVSTPVTVCGDIHGQFYDLCELFRTGGQVPDTNYIFMGDFVDRGYYSLETFTYLLALKAKWPDRITLLRGNHESRQITQVYGFYDECQTK 132
[Close]
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PPP6_MOUSE (Serine/threonine-protein phosphatase 6 catalytic subunit OS=Mus musculus GN=Ppp6c PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 3.071e-41
Identity = 77/95 (81.05%), Postives = 86/95 (90.53%), Query Frame = 1 
Query:    1 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            ESNVQPV++PVTVCGDIHGQF+DL +LF+TGG VP+TNYIFMGDFVDRGY SLE FT LL LKA++P  ITLLRGNHESRQ+TQVYGFYDECQ K
Sbjct:   38 ESNVQPVSTPVTVCGDIHGQFYDLCELFRTGGQVPDTNYIFMGDFVDRGYYSLETFTYLLALKAKWPDRITLLRGNHESRQITQVYGFYDECQTK 132
[Close]
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PPP6_HUMAN (Serine/threonine-protein phosphatase 6 catalytic subunit OS=Homo sapiens GN=PPP6C PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 3.071e-41
Identity = 77/95 (81.05%), Postives = 86/95 (90.53%), Query Frame = 1 
Query:    1 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            ESNVQPV++PVTVCGDIHGQF+DL +LF+TGG VP+TNYIFMGDFVDRGY SLE FT LL LKA++P  ITLLRGNHESRQ+TQVYGFYDECQ K
Sbjct:   38 ESNVQPVSTPVTVCGDIHGQFYDLCELFRTGGQVPDTNYIFMGDFVDRGYYSLETFTYLLALKAKWPDRITLLRGNHESRQITQVYGFYDECQTK 132
[Close]
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PPE1_SCHPO (Serine/threonine-protein phosphatase ppe1 OS=Schizosaccharomyces pombe GN=ppe1 PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 3.071e-41
Identity = 75/95 (78.95%), Postives = 85/95 (89.47%), Query Frame = 1 
Query:    1 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            ESN+QPV +PVTVCGDIHGQF+DL++LF+ GG +P TNYIFMGDFVDRGY SLE FT+ +LLKARYP  ITLLRGNHESRQ+TQVYGFYDECQ K
Sbjct:   36 ESNIQPVRTPVTVCGDIHGQFYDLLELFRVGGELPSTNYIFMGDFVDRGYFSLETFTLFMLLKARYPDKITLLRGNHESRQITQVYGFYDECQTK 130
[Close]
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PP2A4_ORYSJ (Serine/threonine-protein phosphatase PP2A-4 catalytic subunit OS=Oryza sativa subsp. japonica GN=PP2A4 PE=2 SV=2)

HSP 1 Score: 160.614 bits (405), Expect = 2.201e-39
Identity = 71/95 (74.74%), Postives = 83/95 (87.37%), Query Frame = 1 
Query:    1 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            ESNVQPV SPVT+CGDIHGQFHDL++LF+ GG  P+TNY+FMGD+VDRGY S+E  T+L+ LK RYP  IT+LRGNHESRQ+TQVYGFYDEC RK
Sbjct:   47 ESNVQPVKSPVTICGDIHGQFHDLVELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRK 141
[Close]
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PP2A4_ORYSI (Putative serine/threonine-protein phosphatase PP2A-4 catalytic subunit OS=Oryza sativa subsp. indica GN=PP2A4 PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 2.201e-39
Identity = 71/95 (74.74%), Postives = 83/95 (87.37%), Query Frame = 1 
Query:    1 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            ESNVQPV SPVT+CGDIHGQFHDL++LF+ GG  P+TNY+FMGD+VDRGY S+E  T+L+ LK RYP  IT+LRGNHESRQ+TQVYGFYDEC RK
Sbjct:   48 ESNVQPVKSPVTICGDIHGQFHDLVELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRK 142
The following BLAST results are available for this feature:
BLAST of CF510189 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 197
Match NameE-valueIdentityDescription
FYPP_PEA1.469e-51100.00Phytochrome-associated serine/threonine protein ph... [more]
FYPP3_ARATH3.274e-5198.95Phytochrome-associated serine/threonine protein ph... [more]
FYPP1_ARATH5.584e-5198.95Phytochrome-associated serine/threonine protein ph... [more]
PPP6_DICDI9.547e-4382.11Serine/threonine-protein phosphatase 6 catalytic s... [more]
PPP6_RAT3.071e-4181.05Serine/threonine-protein phosphatase 6 catalytic s... [more]
PPP6_MOUSE3.071e-4181.05Serine/threonine-protein phosphatase 6 catalytic s... [more]
PPP6_HUMAN3.071e-4181.05Serine/threonine-protein phosphatase 6 catalytic s... [more]
PPE1_SCHPO3.071e-4178.95Serine/threonine-protein phosphatase ppe1 OS=Schiz... [more]
PP2A4_ORYSJ2.201e-3974.74Serine/threonine-protein phosphatase PP2A-4 cataly... [more]
PP2A4_ORYSI2.201e-3974.74Putative serine/threonine-protein phosphatase PP2A... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-704 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-9_C02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510189 ID=CF510189; Name=CF510189; organism=Citrus sinensis; type=EST; length=285bp
GAGTCCAATGTGCAGCCTGTTAACAGTCCGGTCACTGTCTGTGGTGATAT
TCATGGCCAGTTTCATGACCTAATGAAACTTTTTCAAACAGGAGGTCATG
TACCAGAGACAAATTACATATTTATGGGTGATTTCGTTGATCGGGGTTAC
AATAGTCTTGAAGTTTTCACCATTCTTTTGCTTCTTAAGGCAAGATACCC
GGCAAATATTACTCTTTTACGTGGAAATCATGAAAGCAGACAACTGACCC
AGGTATATGGATTTTATGATGAGTGCCAGAGGAAG
back to top