CF510203

Overview
NameCF510203
Unique NameCF510203
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length314
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2838 contig Csv1_Contig2838:303..616. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF510203 vs. ExPASy Swiss-Prot
Match: MPCP_PONAB (Phosphate carrier protein, mitochondrial OS=Pongo abelii GN=SLC25A3 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 7.377e-27
Identity = 55/90 (61.11%), Postives = 62/90 (68.89%), Query Frame = 1
Query:    1 VVAAPSEPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQGAC 270
            + AA  E    E  S  +YA C  GG+LSCGLTHTAV PLDLVKC MQ+DP KYK I +GF V LKE G+RG  +GW PT LGYS QG C
Sbjct:   46 LAAAAVEEYSCEFGSAKYYALCGFGGVLSCGLTHTAVVPLDLVKCRMQVDPQKYKGIFNGFSVTLKEDGVRGLAKGWAPTFLGYSMQGLC 135          
BLAST of CF510203 vs. ExPASy Swiss-Prot
Match: MPCP_MOUSE (Phosphate carrier protein, mitochondrial OS=Mus musculus GN=Slc25a3 PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 7.377e-27
Identity = 54/90 (60.00%), Postives = 63/90 (70.00%), Query Frame = 1
Query:    1 VVAAPSEPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQGAC 270
            + AA  E    E  S  +YA C  GG+LSCGLTHTAV PLDLVKC MQ+DP KYK I +GF + LKE G+RG  +GW PTL+GYS QG C
Sbjct:   42 LAAAAVEEYSCEFGSMKYYALCGFGGVLSCGLTHTAVVPLDLVKCRMQVDPQKYKGIFNGFSITLKEDGVRGLAKGWAPTLIGYSMQGLC 131          
BLAST of CF510203 vs. ExPASy Swiss-Prot
Match: MPCP_RAT (Phosphate carrier protein, mitochondrial OS=Rattus norvegicus GN=Slc25a3 PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 9.635e-27
Identity = 54/90 (60.00%), Postives = 63/90 (70.00%), Query Frame = 1
Query:    1 VVAAPSEPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQGAC 270
            + AA  E    E  S  +YA C  GG+LSCGLTHTAV PLDLVKC MQ+DP KYK I +GF + LKE G+RG  +GW PTL+GYS QG C
Sbjct:   41 LAAAAVEGYSCEFGSMKYYALCGFGGVLSCGLTHTAVVPLDLVKCRMQVDPQKYKGIFNGFSITLKEDGVRGLAKGWAPTLIGYSMQGLC 130          
BLAST of CF510203 vs. ExPASy Swiss-Prot
Match: MPCP_CAEEL (Phosphate carrier protein, mitochondrial OS=Caenorhabditis elegans GN=F01G4.6 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.287e-25
Identity = 48/86 (55.81%), Postives = 64/86 (74.42%), Query Frame = 1
Query:    7 AAPSEPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQG 264
            +A S PG++E  S  +YA C +GG+LSCG+THTA+ PLDLVKC +Q++P KY  I++GF   + E+G R   +GW PTLLGYSAQG
Sbjct:   27 SAVSAPGQVEFGSGKYYAYCALGGVLSCGITHTAIVPLDLVKCRIQVNPEKYTGIATGFRTTIAEEGARALVKGWAPTLLGYSAQG 112          
BLAST of CF510203 vs. ExPASy Swiss-Prot
Match: MPCP_HUMAN (Phosphate carrier protein, mitochondrial OS=Homo sapiens GN=SLC25A3 PE=1 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 9.018e-25
Identity = 51/88 (57.95%), Postives = 60/88 (68.18%), Query Frame = 1
Query:    7 AAPSEPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQGAC 270
            AA  E    +  S  F+  C +GGI+SCG THTA+ PLDLVKC MQ+DP KYK I +GF V LKE G+RG  +GW PT LGYS QG C
Sbjct:   49 AAVEEQYSCDYGSGRFFILCGLGGIISCGTTHTALVPLDLVKCRMQVDPQKYKGIFNGFSVTLKEDGVRGLAKGWAPTFLGYSMQGLC 136          
BLAST of CF510203 vs. ExPASy Swiss-Prot
Match: MPCP_BOVIN (Phosphate carrier protein, mitochondrial OS=Bos taurus GN=SLC25A3 PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.178e-24
Identity = 51/88 (57.95%), Postives = 60/88 (68.18%), Query Frame = 1
Query:    7 AAPSEPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQGAC 270
            AA  E    +  S  F+  C +GGI+SCG THTA+ PLDLVKC MQ+DP KYKSI +GF V LKE G RG  +GW PT +GYS QG C
Sbjct:   49 AAVEEQYSCDYGSGRFFILCGLGGIISCGTTHTALVPLDLVKCRMQVDPQKYKSIFNGFSVTLKEDGFRGLAKGWAPTFIGYSLQGLC 136          
BLAST of CF510203 vs. ExPASy Swiss-Prot
Match: MPCP_CHOFU (Phosphate carrier protein, mitochondrial OS=Choristoneura fumiferana PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.901e-23
Identity = 45/79 (56.96%), Postives = 60/79 (75.95%), Query Frame = 1
Query:   34 EMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQGAC 270
            E  S  ++A C +GGILSCG+THTAV PLDLVKC +Q+D  KYK++ +GF V ++E+G+RG  +GW PT +GYS QG C
Sbjct:   42 EFGSTKYFALCGLGGILSCGITHTAVVPLDLVKCRLQVDADKYKNVVNGFRVSVREEGLRGLAKGWAPTFIGYSLQGLC 120          
BLAST of CF510203 vs. ExPASy Swiss-Prot
Match: MPCP_SCHPO (Probable mitochondrial phosphate carrier protein OS=Schizosaccharomyces pombe GN=SPBC1703.13c PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 4.632e-21
Identity = 41/85 (48.24%), Postives = 63/85 (74.12%), Query Frame = 1
Query:   13 PSEPGK-IEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQG 264
            P+ P K +++Y+P +Y  CT+GG+L+CG TH+A+TPLDL+KC  Q++P  Y    +GF  +L ++G+RG + G +PTL+GYS QG
Sbjct:    8 PAPPKKTLQLYTPQYYGLCTLGGLLACGTTHSAITPLDLIKCRKQVNPNIYPGNIAGFKTILSKEGLRGLYTGGMPTLIGYSLQG 92          
BLAST of CF510203 vs. ExPASy Swiss-Prot
Match: PIC2_YEAST (Mitochondrial phosphate carrier protein 2 OS=Saccharomyces cerevisiae GN=PIC2 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.657e-19
Identity = 39/83 (46.99%), Postives = 59/83 (71.08%), Query Frame = 1
Query:   19 EPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQGA 267
            +P KI++Y+  FYA CT+GGI++CG TH+++TPLDLVKC +Q++P  Y S   GF  ++  +G +  + G+  T +GYS QGA
Sbjct:    6 QPRKIQLYTKEFYATCTLGGIIACGPTHSSITPLDLVKCRLQVNPKLYTSNLQGFRKIIANEGWKKVYTGFGATFVGYSLQGA 88          
BLAST of CF510203 vs. ExPASy Swiss-Prot
Match: MCFN_DICDI (Mitochondrial substrate carrier family protein N OS=Dictyostelium discoideum GN=mcfN PE=3 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 1.351e-12
Identity = 32/74 (43.24%), Postives = 47/74 (63.51%), Query Frame = 1
Query:   43 SPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQG 264
            +P+ +     GG LSC +TH+ V PLD+VK  +Q +P KY  + +GF  ++KEQG  G  +G  PT +GY+ QG
Sbjct:    6 TPSLFLKYGFGGALSCSITHSLVVPLDVVKTLLQTNPGKYTGMMNGFSTVIKEQGPSGLLQGLGPTAVGYALQG 79          
The following BLAST results are available for this feature:
BLAST of CF510203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
MPCP_PONAB7.377e-2761.11Phosphate carrier protein, mitochondrial OS=Pongo ... [more]
MPCP_MOUSE7.377e-2760.00Phosphate carrier protein, mitochondrial OS=Mus mu... [more]
MPCP_RAT9.635e-2760.00Phosphate carrier protein, mitochondrial OS=Rattus... [more]
MPCP_CAEEL5.287e-2555.81Phosphate carrier protein, mitochondrial OS=Caenor... [more]
MPCP_HUMAN9.018e-2557.95Phosphate carrier protein, mitochondrial OS=Homo s... [more]
MPCP_BOVIN1.178e-2457.95Phosphate carrier protein, mitochondrial OS=Bos ta... [more]
MPCP_CHOFU2.901e-2356.96Phosphate carrier protein, mitochondrial OS=Choris... [more]
MPCP_SCHPO4.632e-2148.24Probable mitochondrial phosphate carrier protein O... [more]
PIC2_YEAST9.657e-1946.99Mitochondrial phosphate carrier protein 2 OS=Sacch... [more]
MCFN_DICDI1.351e-1243.24Mitochondrial substrate carrier family protein N O... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-718 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-9_D12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510203 ID=CF510203; Name=CF510203; organism=Citrus sinensis; type=EST; length=314bp
GTTGTTGCGGCACCGAGCGAGCCAGGGAAGATAGAGATGTACTCCCCTGC
ATTCTACGCCGCTTGTACCGTCGGCGGGATCCTCAGCTGCGGTCTCACTC
ACACGGCCGTCACTCCTCTTGACCTCGTCAAGTGCAATATGCAGATTGAT
CCTGTTAAGTATAAAAGCATATCATCTGGTTTTGGAGTTTTGCTCAAGGA
ACAGGGAATCAGGGGCTTCTTCAGGGGATGGGTACCTACCTTGCTTGGTT
ACAGCGCCCAAGGTGCTTGCAAGTTTGGATTCTACGAGTTCTTCAAGAAG
TACTACTCTGACAT
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