CF510215
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF510215 vs. ExPASy Swiss-Prot
Match: RL212_ARATH (60S ribosomal protein L21-2 OS=Arabidopsis thaliana GN=RPL21E PE=2 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 8.328e-55 Identity = 94/106 (88.68%), Postives = 104/106 (98.11%), Query Frame = 1 Query: 55 MPAGHGLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFK 372 MPAGHG+R+RTRDLFARPFRKKGYIPLSTYLRT+K+GDYVDVKVNGA+HKGMPHKFYHGRTGR+WNVTKRA+GVE+NKQ+GNRII+KRIHVRVEHVQ SRC EEFK Sbjct: 1 MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGRTGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFK 106
BLAST of CF510215 vs. ExPASy Swiss-Prot
Match: RL211_ARATH (60S ribosomal protein L21-1 OS=Arabidopsis thaliana GN=RPL21A PE=2 SV=2) HSP 1 Score: 211.846 bits (538), Expect = 8.328e-55 Identity = 94/106 (88.68%), Postives = 104/106 (98.11%), Query Frame = 1 Query: 55 MPAGHGLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFK 372 MPAGHG+R+RTRDLFARPFRKKGYIPLSTYLRT+K+GDYVDVKVNGA+HKGMPHKFYHGRTGR+WNVTKRA+GVE+NKQ+GNRII+KRIHVRVEHVQ SRC EEFK Sbjct: 1 MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGRTGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFK 106
BLAST of CF510215 vs. ExPASy Swiss-Prot
Match: RL21_CYAPA (60S ribosomal protein L21 OS=Cyanophora paradoxa GN=RPL21 PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 3.886e-36 Identity = 71/105 (67.62%), Postives = 84/105 (80.00%), Query Frame = 1 Query: 55 MPAGHGLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEF 369 MP +G R+RTR LFAR F+ G + LSTYL +KIG+YVDV N AVHKGMP K+YHGRTG VWNVTKRAIGVEINK+V +RIIKKRIHVR++HV+ S C + F Sbjct: 1 MPHSYGYRARTRALFARAFKTNGPVHLSTYLTNFKIGEYVDVVGNAAVHKGMPFKYYHGRTGIVWNVTKRAIGVEINKRVRHRIIKKRIHVRIDHVKKSSCRDSF 105
BLAST of CF510215 vs. ExPASy Swiss-Prot
Match: RL21_DICDI (60S ribosomal protein L21 OS=Dictyostelium discoideum GN=rpl21 PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 8.658e-36 Identity = 68/99 (68.69%), Postives = 81/99 (81.82%), Query Frame = 1 Query: 55 MPAGHGLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPS 351 MP GLR+RTR LF+R FR G + +T+LRT+++GDYVD+K G VHKGMPHKFYHGRTGRVWNVT RA+GV INK+VG RII K+IHVR EHV+PS Sbjct: 1 MPHSFGLRARTRYLFSRGFRNHGLLQTTTFLRTFRLGDYVDIKATGNVHKGMPHKFYHGRTGRVWNVTPRAVGVIINKRVGPRIIAKKIHVRTEHVKPS 99
BLAST of CF510215 vs. ExPASy Swiss-Prot
Match: RL21B_SCHPO (60S ribosomal protein L21-B OS=Schizosaccharomyces pombe GN=rpl21b PE=2 SV=2) HSP 1 Score: 142.124 bits (357), Expect = 8.104e-34 Identity = 64/105 (60.95%), Postives = 86/105 (81.90%), Query Frame = 1 Query: 55 MPAGHGLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEF 369 MP +G+R+RTR F R FR+ G I LSTYL+TYK+GD VD+KVNGAV KGMPHK+YHG+TG V+NVT+ ++GV I K VGNR ++KR++VR+EHV+ S+C ++F Sbjct: 1 MPHSYGIRARTRYTFQRGFREHGQIRLSTYLKTYKVGDIVDIKVNGAVQKGMPHKYYHGKTGVVYNVTQSSVGVLIYKVVGNRYMEKRVNVRIEHVKHSKCRQDF 105
BLAST of CF510215 vs. ExPASy Swiss-Prot
Match: RL21A_YEAST (60S ribosomal protein L21-A OS=Saccharomyces cerevisiae GN=RPL21A PE=1 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 8.104e-34 Identity = 63/105 (60.00%), Postives = 83/105 (79.05%), Query Frame = 1 Query: 55 MPAGHGLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEF 369 M HG RSRTR +F R FRK G + LSTYL+ YK+GD VD+K NG++ KGMPHKFY G+TG V+NVTK ++GV INK VGNR ++KR+++RVEH++ S+C +EF Sbjct: 1 MGKSHGYRSRTRYMFQRDFRKHGAVHLSTYLKVYKVGDIVDIKANGSIQKGMPHKFYQGKTGVVYNVTKSSVGVIINKMVGNRYLEKRLNLRVEHIKHSKCRQEF 105
BLAST of CF510215 vs. ExPASy Swiss-Prot
Match: RL21A_SCHPO (60S ribosomal protein L21-A OS=Schizosaccharomyces pombe GN=rpl21a PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 8.104e-34 Identity = 64/105 (60.95%), Postives = 86/105 (81.90%), Query Frame = 1 Query: 55 MPAGHGLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEF 369 MP +G+R+RTR F R FR+ G I LSTYL+TYK+GD VD+KVNGAV KGMPHK+YHG+TG V+NVT+ ++GV I K VGNR ++KR++VR+EHV+ S+C ++F Sbjct: 1 MPHSYGIRARTRYTFQRGFREHGQIRLSTYLKTYKVGDIVDIKVNGAVQKGMPHKYYHGKTGVVYNVTQSSVGVLIYKVVGNRYMEKRVNVRIEHVKHSKCRQDF 105
BLAST of CF510215 vs. ExPASy Swiss-Prot
Match: RL21B_YEAST (60S ribosomal protein L21-B OS=Saccharomyces cerevisiae GN=RPL21B PE=1 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.805e-33 Identity = 62/105 (59.05%), Postives = 83/105 (79.05%), Query Frame = 1 Query: 55 MPAGHGLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEF 369 M HG RSRTR +F R FRK G + +STYL+ YK+GD VD+K NG++ KGMPHKFY G+TG V+NVTK ++GV INK VGNR ++KR+++RVEH++ S+C +EF Sbjct: 1 MGKSHGYRSRTRYMFQRDFRKHGAVHMSTYLKIYKVGDIVDIKANGSIQKGMPHKFYQGKTGVVYNVTKSSVGVIINKMVGNRYLEKRLNLRVEHIKHSKCRQEF 105
BLAST of CF510215 vs. ExPASy Swiss-Prot
Match: RL21_HUMAN (60S ribosomal protein L21 OS=Homo sapiens GN=RPL21 PE=1 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 1.211e-29 Identity = 57/100 (57.00%), Postives = 77/100 (77.00%), Query Frame = 1 Query: 70 GLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEF 369 G R TR +F+RPFRK G +PL+TY+R YK GD VD+K G V KGMPHK YHG+TGRV+NVT+ A+G+ +NKQV +I+ KRI+VR+EH++ S+ + F Sbjct: 6 GKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSF 105
BLAST of CF510215 vs. ExPASy Swiss-Prot
Match: RL21_RAT (60S ribosomal protein L21 OS=Rattus norvegicus GN=Rpl21 PE=1 SV=3) HSP 1 Score: 127.872 bits (320), Expect = 1.582e-29 Identity = 57/100 (57.00%), Postives = 77/100 (77.00%), Query Frame = 1 Query: 70 GLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEF 369 G R TR +F+RPFRK G +PL+TY+R YK GD VD+K G V KGMPHK YHG+TGRV+NVT+ A+G+ +NKQV +I+ KRI+VR+EH++ S+ + F Sbjct: 6 GKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIIVNKQVKGKILAKRINVRIEHIKHSKSRDSF 105 The following BLAST results are available for this feature:
BLAST of CF510215 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >CF510215 ID=CF510215; Name=CF510215; organism=Citrus sinensis; type=EST; length=374bpback to top |