CF510217

Overview
NameCF510217
Unique NameCF510217
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length248
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF510217 vs. ExPASy Swiss-Prot
Match: R13L1_ARATH (Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana GN=RPPL1 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.180e-14
Identity = 37/65 (56.92%), Postives = 46/65 (70.77%), Query Frame = 1 
Query:   28 LTITGCGGTKFPSWLGDSSFSKLACLELRQCT-STSLPSVGQLPFLKELDISGMDGVVSVGSEFY 219
            L I    G +FP WL D SFS++ C+ LR+C   TSLPS+GQLP LKEL ISGM G+ S+G +FY
Sbjct:  770 LAIERYKGRRFPDWLSDPSFSRIVCIRLRECQYCTSLPSLGQLPCLKELHISGMVGLQSIGRKFY 834
The following BLAST results are available for this feature:
BLAST of CF510217 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
R13L1_ARATH7.180e-1456.92Putative disease resistance RPP13-like protein 1 O... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-732 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-9_F04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510217 ID=CF510217; Name=CF510217; organism=Citrus sinensis; type=EST; length=248bp
GTGGATCCCCCGGGCTGCAGGCAAGTGCTCACCATCACAGGCTGTGGTGG
TACAAAATTTCCAAGTTGGCTAGGAGATTCCTCTTTCTCAAAATTGGCTT
GTCTAGAATTACGTCAGTGCACCTCTACATCTTTGCCATCGGTAGGGCAA
CTACCATTTCTAAAGGAACTTGATATAAGTGGAATGGACGGAGTAGTGAG
CGTGGGGTCGGAGTTTTATGGAAACAGTTGCTCAGTGCCCTTTCCGTC
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