CF510245

Overview
NameCF510245
Unique NameCF510245
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length514
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10176 contig Csv1_Contig10176:41..554. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF510245 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.682e-18
Identity = 55/151 (36.42%), Postives = 84/151 (55.63%), Query Frame = 1
Query:   76 SEPVLDIIGNKVKSTLEYKLIPVLDGAGGFSTHLG--TNGQCPLDVIQLSSPSERGDNLRLLPYDNYK-IVKVSTDVNLRFPVKVSVKPCNEEPLWKVDSYDDPL----IVTGGSEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCPSVC 507
            + PVLD  G+++++ ++Y ++  + GAGG    LG  T   CP  V+Q  S  + G  +     D+   +V+VSTDVN+ F V +  + C+   +W++D+YD+      + T G +G PG  TL +WFKIEKAG       Y    CPSVC
Sbjct:   28 NSPVLDTDGDELQTGVQYYVLSSISGAGGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEF-VPIRDRLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGVLG----YKFRFCPSVC 173          
BLAST of CF510245 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 91.2781 bits (225), Expect = 2.869e-18
Identity = 61/165 (36.97%), Postives = 89/165 (53.94%), Query Frame = 1
Query:   52 PLLGISSNS-EPVLDIIGNKVKSTLEYKLIPVLDGAGGFSTHLGT--NGQ--CPLDVIQLSSPSERGDNLRLLPYDNYK--IVKVSTDVNLRFPVKVSVKPCN--EEPLWKVDSYDDP----LIVTGGSEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCPSVC 507
            PLL  + ++  PVLDI G K+++   Y ++PVL   GG  T   T  NG   CP  V+Q     +    L   P +N K  +V+VSTD+N+ F    +  PC      +W++D YD+      +  GG +G+PG ET+ +WFKIE+   F   G Y +V CP+VC
Sbjct:   24 PLLSAADSAPNPVLDIDGEKLRTGTNYYIVPVLRDHGGGLTVSATTPNGTFVCPPRVVQTRKEVDHDRPLAFFP-ENPKEDVVRVSTDLNINFS---AFMPCRWTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEE---FCGSGFYKLVFCPTVC 181          
BLAST of CF510245 vs. ExPASy Swiss-Prot
Match: LSPI_CARPA (Latex serine proteinase inhibitor OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.241e-12
Identity = 50/150 (33.33%), Postives = 78/150 (52.00%), Query Frame = 1
Query:   79 EPVLDIIGNKVKSTLEYKLIPVLDGAGGFSTHL---GTNGQCPLDVIQLSSPSERGDNLRLLPYDNYK--IVKVSTDVNLRFPVKVSVKPCNEEPLWKVDSYDDPL---IVTGGSEGHPGAETLLNWFKIEKAG-NFSYGGVYNIVHCPS 501
            +P++DI G  V   ++Y ++  + GAGG    +   G   +CPL V+Q   P + G+ +      N K  IV  S D+N++F + ++   CNE   WKVD +   +   +  GG +G+ G E+  + FKI+KAG  FS    Y    CPS
Sbjct:    4 KPIVDIDGKPVLYGVDYFVVSAIWGAGGGGLTVYGPGNKKKCPLSVVQ--DPFDNGEPIIFSAIKNVKDNIVFESVDLNVKFNITIN---CNETTAWKVDRFPGVIGWTVTLGGEKGYHGFESTHSMFKIKKAGLPFS----YKFHFCPS 144          
The following BLAST results are available for this feature:
BLAST of CF510245 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
ASP_THECC1.682e-1836.4221 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU2.869e-1836.97Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
LSPI_CARPA5.241e-1233.33Latex serine proteinase inhibitor OS=Carica papaya... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-760 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-9_H11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510245 ID=CF510245; Name=CF510245; organism=Citrus sinensis; type=EST; length=514bp
ACTTCATTGATAACAACACTCTCCTTCCTTATCCTTACCTTGGCCACGCA
GCCTCTATTGGGCATCTCATCAAACTCTGAACCTGTCTTAGATATCATTG
GCAACAAGGTCAAATCCACCCTCGAGTATAAACTTATCCCAGTCCTAGAT
GGCGCCGGTGGATTCAGCACACACCTAGGCACAAATGGACAGTGTCCCTT
GGACGTTATCCAATTAAGTTCTCCTAGCGAAAGGGGAGATAATTTAAGAT
TACTTCCGTACGACAATTACAAAATTGTCAAGGTATCCACTGATGTCAAC
CTGAGATTCCCCGTAAAAGTTTCTGTTAAGCCCTGTAATGAAGAACCATT
GTGGAAAGTTGATAGCTATGACGATCCATTAATTGTAACCGGCGGAAGTG
AGGGCCACCCAGGAGCTGAAACGTTGCTAAATTGGTTTAAGATTGAGAAA
GCTGGAAATTTTTCATATGGTGGTGTATACAATATTGTCCATTGTCCGAG
TGTCTGTCTATCTT
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