CF510260

Overview
NameCF510260
Unique NameCF510260
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length739
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig611 contig Csv1_Contig611:34..772. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF510260 vs. ExPASy Swiss-Prot
Match: QUA1_ARATH (Glycosyltransferase QUASIMODO1 OS=Arabidopsis thaliana GN=QUA1 PE=1 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 1.267e-76
Identity = 163/230 (70.87%), Postives = 177/230 (76.96%), Query Frame = 2
Query:   59 HRTARAG---APVTGRFTFIMRLLASFITFAVXXXXXXXXXXXXXXXXRDLYSSGLNSGTYGLGSMRRSVLALKSDPLKPRLDQIRKQADDHRALAMAYASYARKLKLENSKLVRIFADLSRNYTDLITKPTYRALMESDSLTIDESILRQFEKEVKERIKLTRQIIAEAKESFDNQLKIQKLKDTIFAGNEQLTKAKKQGAFSSLIAAKSIPKSLHCLAMRLMEERIAH 739
            HR  R G   A + GR T    L A   T A+                 DL   G+     G+GS RRS+L +KSDPLKPRL QIRKQADDHR+LA+AYASYARKLKLENSKLVRIFADLSRNYTDLI KPTYRAL +SD  +I+ES+LRQFEKEVKERIK+TRQ+IAEAKESFDNQLKIQKLKDTIFA NEQLT AKKQGAFSSLIAAKSIPK LHCLAMRLMEERIAH
Sbjct:    5 HRLLRGGGSPAIIGGRIT----LTAFASTIALFLFTLSFFFASDSNDSPDLLLPGVEYSN-GVGS-RRSMLDIKSDPLKPRLIQIRKQADDHRSLALAYASYARKLKLENSKLVRIFADLSRNYTDLINKPTYRALYDSDGASIEESVLRQFEKEVKERIKMTRQVIAEAKESFDNQLKIQKLKDTIFAVNEQLTNAKKQGAFSSLIAAKSIPKGLHCLAMRLMEERIAH 228          
BLAST of CF510260 vs. ExPASy Swiss-Prot
Match: GLTR_ARATH (Uncharacterized glycosyltransferase At3g02350 OS=Arabidopsis thaliana GN=At3g02350 PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.253e-49
Identity = 100/169 (59.17%), Postives = 130/169 (76.92%), Query Frame = 2
Query:  233 GLGSMRRSVLALKSDPLKPRLDQIRKQADDHRALAMAYASYARKLKLENSKLVRIFADLSRNYTDLITKPTYRALMESDSLTIDESILRQFEKEVKERIKLTRQIIAEAKESFDNQLKIQKLKDTIFAGNEQLTKAKKQGAFSSLIAAKSIPKSLHCLAMRLMEERIAH 739
            G   M+R+ LAL+SDPLK RLD I KQA DH  L  AYA+YARKLKL+ SK +++F DL+ N++DL +KP  ++ +  +   ++E   RQ EKEVK+++K  R +I E+KES+D QLKIQKLKDTIFA  EQLTKAKK GA +SLI+AKS+PKSLHCLAMRL+ ERI++
Sbjct:   63 GNAYMQRTFLALQSDPLKTRLDLIHKQAIDHLTLVNAYAAYARKLKLDASKQLKLFEDLAINFSDLQSKPGLKSAVSDNGNALEEDSFRQLEKEVKDKVKTARMMIVESKESYDTQLKIQKLKDTIFAVQEQLTKAKKNGAVASLISAKSVPKSLHCLAMRLVGERISN 231          
The following BLAST results are available for this feature:
BLAST of CF510260 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
QUA1_ARATH1.267e-7670.87Glycosyltransferase QUASIMODO1 OS=Arabidopsis thal... [more]
GLTR_ARATH2.253e-4959.17Uncharacterized glycosyltransferase At3g02350 OS=A... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-442 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-83_B04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510260 ID=CF510260; Name=CF510260; organism=Citrus sinensis; type=EST; length=739bp
CCCTCCTCCACTCAGTCCATTGTTCGTCTCATCAAAATCAAAACTCAAAA
TGGCGACTCATCGAACCGCACGCGCCGGAGCTCCGGTAACTGGACGTTTT
ACTTTCATCATGAGACTCCTCGCGTCCTTCATTACATTTGCCGTCTTCCT
CTTCTTCACTTCCTCTCTGCTCTTCACTTCTCACTCTCACTCTCGCGATC
TTTACAGCTCGGGTTTGAATTCGGGCACCTATGGACTCGGATCTATGCGG
AGATCCGTTTTGGCGCTGAAATCAGATCCTTTGAAGCCGCGGCTGGACCA
GATCAGAAAGCAAGCCGATGATCACCGAGCTCTGGCGATGGCTTACGCGT
CCTACGCGCGTAAGCTCAAGCTTGAGAACTCGAAGCTGGTTAGAATCTTC
GCTGATCTCTCAAGAAATTACACGGATCTTATTACTAAGCCTACATATCG
GGCTCTAATGGAGTCCGATTCTCTCACAATTGATGAATCAATATTGAGAC
AATTCGAAAAGGAAGTAAAAGAGAGAATCAAATTGACTCGCCAGATAATT
GCGGAGGCCAAAGAGTCTTTTGATAATCAGTTGAAGATTCAGAAGTTAAA
AGACACCATTTTTGCGGGGAATGAACAGTTGACTAAGGCGAAAAAGCAAG
GAGCTTTTTCAAGTTTGATTGCTGCAAAATCGATACCTAAGAGTTTGCAT
TGTTTGGCTATGAGATTGATGGAAGAGCGGATTGCTCAT
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