CF510262
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF510262 vs. ExPASy Swiss-Prot
Match: PRF1_SOLLC (36.4 kDa proline-rich protein OS=Solanum lycopersicum GN=TPRP-F1 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 9.069e-24 Identity = 52/88 (59.09%), Postives = 64/88 (72.73%), Query Frame = 1 Query: 25 QQTCPINALKLGACXXXXXXXXXXXXXXXAKEKCCPLLYGLVDLDAAICLCTAIKIKALSLIDILVPISLQVLVSDCGKHPPAGFQCP 288 Q TCPI+ALKLGAC AK+ CCPLL GLVDLDAAICLCT I++K L+ I+I++PI+LQVL+ DCGK+PP F+CP Sbjct: 258 QPTCPIDALKLGACVDVLGGLIHIGIGGSAKQTCCPLLGGLVDLDAAICLCTTIRLKLLN-INIILPIALQVLIDDCGKYPPKDFKCP 344
BLAST of CF510262 vs. ExPASy Swiss-Prot
Match: CCDP_MAIZE (Cortical cell-delineating protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 2.924e-14 Identity = 42/93 (45.16%), Postives = 53/93 (56.99%), Query Frame = 1 Query: 10 PLLRTQQTCPINALKLGACXXXXXXXXXXXXXXXAKEKCCPLLYGLVDLDAAICLCTAIKIKALSLIDILVPISLQVLVSDCGKHPPAGFQCP 288 P + CPI+ALKL C E+CCPLL GLVDLDAA+CLCTAIK L I + VP+SL ++++CG+ P F CP Sbjct: 40 PSSHSHGRCPIDALKLKVCAKVLGLVKVGLPQY---EQCCPLLEGLVDLDAALCLCTAIKANVLG-IHLNVPLSLNFILNNCGRICPEDFTCP 128
BLAST of CF510262 vs. ExPASy Swiss-Prot
Match: 14KD_DAUCA (14 kDa proline-rich protein DC2.15 OS=Daucus carota PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.229e-12 Identity = 36/84 (42.86%), Postives = 50/84 (59.52%), Query Frame = 1 Query: 34 CPINALKLGACXXXXXXXXXXXXXXXAKEKCCPLLYGLVDLDAAICLCTAIKIKALSLIDILVPISLQVLVSDCGKHPPAGFQC 285 CP +ALKLG C CC LL GLV+L+AA+CLCTAIK L ++ +PI+L +++++CGK P GF+C Sbjct: 54 CPRDALKLGVCADVLNLVHNVVIGSPPTLPCCSLLEGLVNLEAAVCLCTAIKANILGK-NLNLPIALSLVLNNCGKQVPNGFEC 136 The following BLAST results are available for this feature:
BLAST of CF510262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF510262 ID=CF510262; Name=CF510262; organism=Citrus sinensis; type=EST; length=491bpback to top |