CF831957
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF831957 vs. ExPASy Swiss-Prot
Match: ATPG2_ARATH (ATP synthase gamma chain 2, chloroplastic OS=Arabidopsis thaliana GN=ATPC2 PE=2 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 4.949e-39 Identity = 83/114 (72.81%), Postives = 97/114 (85.09%), Query Frame = 2 Query: 2 DELPMLTTNEGKMIVERDSVTFNKGELSPLMLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEALTQ 343 DE+ LT+ +GK+ VER + K E+SPLM FEQDP QILDAMMPLY+NSQILRALQES ASE+A+RM+AMS ATDNA ELKKNL++AYN+ RQAKITGELLEIVAGAEAL + Sbjct: 272 DEMFRLTSKDGKLAVERTKLEVEKPEISPLMQFEQDPVQILDAMMPLYLNSQILRALQESLASELASRMNAMSNATDNAVELKKNLTMAYNRARQAKITGELLEIVAGAEALRE 385
BLAST of CF831957 vs. ExPASy Swiss-Prot
Match: ATPG_MAIZE (ATP synthase subunit gamma, chloroplastic OS=Zea mays PE=1 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 1.881e-38 Identity = 81/112 (72.32%), Postives = 96/112 (85.71%), Query Frame = 2 Query: 2 DELPMLTTNEGKMIVERDSVTFNKGELSPLMLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEAL 337 DEL LTT EGK+ VER+ V SP++ FEQDP QILDA++PLY+NSQILRALQES ASE+AARMSAMS+ATDNA EL+KNLS+AYN++RQAKITGE+LEIVAGA+AL Sbjct: 246 DELFRLTTKEGKLTVEREKVKIETQPFSPVVQFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMSSATDNAIELRKNLSIAYNRQRQAKITGEILEIVAGADAL 357
BLAST of CF831957 vs. ExPASy Swiss-Prot
Match: ATPG_TOBAC (ATP synthase gamma chain, chloroplastic OS=Nicotiana tabacum GN=ATPC PE=1 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 7.146e-38 Identity = 80/112 (71.43%), Postives = 94/112 (83.93%), Query Frame = 2 Query: 2 DELPMLTTNEGKMIVERDSVTFNKGELSPLMLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEAL 337 DE LTT EGK+ VERD + + SP++ FEQDP QILDA++PLY+NSQILRALQES ASE+AARMSAMS+ATDNA ELKKNLS YN++RQAKITGE+LEIVAGA+AL Sbjct: 265 DEFFRLTTKEGKLTVERDIIRTKTTDFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMSSATDNATELKKNLSRVYNRQRQAKITGEILEIVAGADAL 376
BLAST of CF831957 vs. ExPASy Swiss-Prot
Match: ATPG_SPIOL (ATP synthase gamma chain, chloroplastic OS=Spinacia oleracea GN=ATPC PE=1 SV=2) HSP 1 Score: 153.68 bits (387), Expect = 6.049e-37 Identity = 79/111 (71.17%), Postives = 92/111 (82.88%), Query Frame = 2 Query: 2 DELPMLTTNEGKMIVERDSVTFNKGELSPLMLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEA 334 DEL LTT EGK+ VERD + SP++ FEQDPAQILDA++PLY+NSQILRALQES ASE+AARM+AMS ATDNA+ELKK LS+ YN+ RQAKITGE+LEIVAGA A Sbjct: 252 DELFRLTTKEGKLTVERDMIKTETPAFSPILEFEQDPAQILDALLPLYLNSQILRALQESLASELAARMTAMSNATDNANELKKTLSINYNRARQAKITGEILEIVAGANA 362
BLAST of CF831957 vs. ExPASy Swiss-Prot
Match: ATPG1_ARATH (ATP synthase gamma chain 1, chloroplastic OS=Arabidopsis thaliana GN=ATPC1 PE=1 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.141e-35 Identity = 75/111 (67.57%), Postives = 93/111 (83.78%), Query Frame = 2 Query: 2 DELPMLTTNEGKMIVERDSVTFNKGELSPLMLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEA 334 DE LTT EGK+ VER++ + SP++ FEQDP QILDA++PLY+NSQILRALQES ASE+AARMSAMS+A+DNA +LKK+LS+ YN++RQAKITGE+LEIVAGA A Sbjct: 261 DEFFRLTTKEGKLTVERETFRTPTADFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMSSASDNASDLKKSLSMVYNRKRQAKITGEILEIVAGANA 371
BLAST of CF831957 vs. ExPASy Swiss-Prot
Match: ATPG_PEA (ATP synthase gamma chain, chloroplastic OS=Pisum sativum GN=ATPC PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.181e-32 Identity = 72/108 (66.67%), Postives = 86/108 (79.63%), Query Frame = 2 Query: 2 DELPMLTTNEGKMIVERDSVTFNKGELSPLMLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAG 325 DEL LTT EGK+ VERD + + SP++ FEQDP QILDA++PLY+NSQILR LQES ASE+AARMSAMS+A DNA ELK +L+ YN+ QAKITGE+LEIVAG Sbjct: 262 DELFRLTTKEGKLTVERDVIRSKTVDFSPILQFEQDPVQILDALLPLYLNSQILRPLQESLASELAARMSAMSSAFDNASELKTDLTRVYNRATQAKITGEILEIVAG 369
BLAST of CF831957 vs. ExPASy Swiss-Prot
Match: ATPG_ANAVT (ATP synthase gamma chain OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=atpG PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 1.885e-30 Identity = 70/113 (61.95%), Postives = 89/113 (78.76%), Query Frame = 2 Query: 2 DELPMLTTNEGKMIVERDSVTFNKGELSPLMLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEALT 340 DE+ LTT G+ VER +VT L M+FEQDP QILD+++PLY+++Q+LRALQES ASE+AARM+AMS A+DNA EL K+LS++YN+ RQA IT ELLE+V GAEALT Sbjct: 203 DEIFRLTTRGGQFEVERQTVTTQARPLPRDMIFEQDPVQILDSLLPLYLSNQLLRALQESAASELAARMTAMSNASDNAGELIKSLSLSYNKARQAAITQELLEVVGGAEALT 315
BLAST of CF831957 vs. ExPASy Swiss-Prot
Match: ATPG_CHLRE (ATP synthase gamma chain, chloroplastic OS=Chlamydomonas reinhardtii GN=ATPC PE=1 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 2.462e-30 Identity = 67/111 (60.36%), Postives = 86/111 (77.48%), Query Frame = 2 Query: 2 DELPMLTTNEGKMIVERDSVTFNKGELSPLMLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEA 334 DE+ LTT G+ VER+ T L P ++FEQ+PAQILDA++PLYM+S +LR+LQE+ ASE+AARM+AM+ A+DNA ELKK L+V YN++RQAKIT EL EIV GA A Sbjct: 245 DEIFKLTTKGGEFAVEREKTTIETEALDPSLIFEQEPAQILDALLPLYMSSCLLRSLQEALASELAARMNAMNNASDNAKELKKGLTVQYNKQRQAKITQELAEIVGGAAA 355
BLAST of CF831957 vs. ExPASy Swiss-Prot
Match: ATPG_NOSP7 (ATP synthase gamma chain OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=atpG PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 4.199e-30 Identity = 68/113 (60.18%), Postives = 88/113 (77.88%), Query Frame = 2 Query: 2 DELPMLTTNEGKMIVERDSVTFNKGELSPLMLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEALT 340 DE+ LTT GK VER+ V L+P M+FEQDP QILD+++PLY+++Q+LRALQES ASE+AARM+AMS A++NA EL L+++YN+ RQA IT ELLE+V GAEALT Sbjct: 203 DEIFRLTTRGGKFEVEREKVASQVRPLAPDMIFEQDPVQILDSLLPLYLSNQLLRALQESAASELAARMTAMSNASENAGELINTLTLSYNKARQAAITQELLEVVGGAEALT 315
BLAST of CF831957 vs. ExPASy Swiss-Prot
Match: ATPG_ANASP (ATP synthase gamma chain OS=Anabaena sp. (strain PCC 7120) GN=atpG PE=3 SV=2) HSP 1 Score: 130.568 bits (327), Expect = 5.484e-30 Identity = 69/113 (61.06%), Postives = 89/113 (78.76%), Query Frame = 2 Query: 2 DELPMLTTNEGKMIVERDSVTFNKGELSPLMLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEALT 340 DE+ LTT G+ VER +VT L M+FEQDP QILD+++PLY+++Q+LRALQES ASE+AARM+AMS A++NA EL K+LS++YN+ RQA IT ELLE+V GAEALT Sbjct: 203 DEIFRLTTRGGQFQVERQTVTSQARPLPRDMIFEQDPVQILDSLLPLYLSNQLLRALQESAASELAARMTAMSNASENAGELIKSLSLSYNKARQAAITQELLEVVGGAEALT 315 The following BLAST results are available for this feature:
BLAST of CF831957 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831957 ID=CF831957; Name=CF831957; organism=Citrus sinensis; type=EST; length=571bpback to top |