CF831969

Overview
NameCF831969
Unique NameCF831969
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length650
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF831969 vs. ExPASy Swiss-Prot
Match: NAT12_ARATH (Nucleobase-ascorbate transporter 12 OS=Arabidopsis thaliana GN=NAT12 PE=1 SV=3)

HSP 1 Score: 257.684 bits (657), Expect = 3.835e-68
Identity = 126/167 (75.45%), Postives = 140/167 (83.83%), Query Frame = 3
Query:  147 VLAGLSLIGKVGGLIASIPQVMVAALLCFMWAMLAALGLSNLRYSEAGSSRNIIIVGLSLFFSLSIPAYFQQYGISPNTNLSVPSYFQPYSVASHGPFRSKYGGVNYVMNTXXXXXXXXXXXXXXXXDNTVPGSRQERGVYEWSETEAARREPAIAKDYELPFRVGR 647
            VL   SL+GKVGG +ASIPQVMVA+LLCFMWAM  ALGLSNLRYSEAGSSRNIIIVGLSLFFSLS+PAYFQQYGISPN+NLSVPSY+QPY V+SHGPF+S+Y G+NYVMNT                DNTVPGS+QERGVY WS++E A REPA+AKDYELPFRVGR
Sbjct:  533 VLVIFSLVGKVGGFLASIPQVMVASLLCFMWAMFTALGLSNLRYSEAGSSRNIIIVGLSLFFSLSVPAYFQQYGISPNSNLSVPSYYQPYIVSSHGPFKSQYKGMNYVMNTLLSMSMVIAFIMAVILDNTVPGSKQERGVYVWSDSETATREPALAKDYELPFRVGR 699          
BLAST of CF831969 vs. ExPASy Swiss-Prot
Match: NAT11_ARATH (Nucleobase-ascorbate transporter 11 OS=Arabidopsis thaliana GN=NAT11 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.088e-38
Identity = 81/185 (43.78%), Postives = 116/185 (62.70%), Query Frame = 3
Query:  114 INL*SFRSRLLVLAG------LSLIGKVGGLIASIPQVMVAALLCFMWAMLAALGLSNLRYSEAGSSRNIIIVGLSLFFSLSIPAYFQQYGISPNTNLSVPSYFQPYSVASHGPFRSKYGGVNYVMNTXXXXXXXXXXXXXXXXDNTVPGSRQERGVYEWSETEAARREPAIAKDYELPFRVGRV 650
            IN+    SR  ++ G      LS +GK+G ++ASIPQ + A++LCF+WA+  +LGLSNLRY++  S RNI IVG+SLF  LSIPAYFQQY   P ++L +PSY+ P+  AS GPF++    +++ MN                 DNTVPGS++ERGVY W+  E  + +P +  DY LP +  ++
Sbjct:  521 INITKVASRRALVIGAMFLIVLSFLGKLGAILASIPQALAASVLCFIWALTVSLGLSNLRYTQTASFRNITIVGVSLFLGLSIPAYFQQY--QPLSSLILPSYYIPFGAASSGPFQTGIEQLDFAMNAVLSLNMVVTFLLAFILDNTVPGSKEERGVYVWTRAEDMQMDPEMRADYSLPRKFAQI 703          
BLAST of CF831969 vs. ExPASy Swiss-Prot
Match: S23A2_RAT (Solute carrier family 23 member 2 OS=Rattus norvegicus GN=Slc23a2 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 2.359e-17
Identity = 48/164 (29.27%), Postives = 80/164 (48.78%), Query Frame = 3
Query:  147 VLAGLSLIGKVGGLIASIPQVMVAALLCFMWAMLAALGLSNLRYSEAGSSRNIIIVGLSLFFSLSIPAYFQQYGISPNTNLSVPSYFQPYSVASHGPFRSKYGGVNYVMNTXXXXXXXXXXXXXXXXDNTVPGSRQERGVYEWSE-TEAARREPAIAKDYELPF 635
            ++ GL +IGK   L AS+P  ++ AL C ++ M+ A+GLSNL++ +  SSRN+ ++G S+FF L +P+Y +Q                        P  +   G++ V+N                 DNT+PG+ +ERG+ +W +      +     + Y LPF
Sbjct:  462 LMLGLGMIGKFSALFASLPDPVLGALFCTLFGMITAVGLSNLQFIDLNSSRNLFVLGFSIFFGLVLPSYLRQ-----------------------NPLVTGITGIDQVLNVLLTTAMFVGGCVAFILDNTIPGTPEERGIKKWKKGVSKGNKSLDGMESYNLPF 602          
BLAST of CF831969 vs. ExPASy Swiss-Prot
Match: S23A2_MOUSE (Solute carrier family 23 member 2 OS=Mus musculus GN=Slc23a2 PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 5.256e-17
Identity = 46/164 (28.05%), Postives = 80/164 (48.78%), Query Frame = 3
Query:  147 VLAGLSLIGKVGGLIASIPQVMVAALLCFMWAMLAALGLSNLRYSEAGSSRNIIIVGLSLFFSLSIPAYFQQYGISPNTNLSVPSYFQPYSVASHGPFRSKYGGVNYVMNTXXXXXXXXXXXXXXXXDNTVPGSRQERGVYEWSE-TEAARREPAIAKDYELPF 635
            ++ GL ++GK   L AS+P  ++ AL C ++ M+ A+GLSNL++ +  SSRN+ ++G S+FF L +P+Y +Q                        P  +   G++ ++N                 DNT+PG+ +ERG+ +W +      +     + Y LPF
Sbjct:  463 LMLGLGMVGKFSALFASLPDPVLGALFCTLFGMITAVGLSNLQFIDLNSSRNLFVLGFSIFFGLVLPSYLRQ-----------------------NPLVTGITGIDQILNVLLTTAMFVGGCVAFILDNTIPGTPEERGIKKWKKGVSKGSKSLDGMESYNLPF 603          
BLAST of CF831969 vs. ExPASy Swiss-Prot
Match: S23A2_HUMAN (Solute carrier family 23 member 2 OS=Homo sapiens GN=SLC23A2 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.997e-16
Identity = 47/164 (28.66%), Postives = 79/164 (48.17%), Query Frame = 3
Query:  147 VLAGLSLIGKVGGLIASIPQVMVAALLCFMWAMLAALGLSNLRYSEAGSSRNIIIVGLSLFFSLSIPAYFQQYGISPNTNLSVPSYFQPYSVASHGPFRSKYGGVNYVMNTXXXXXXXXXXXXXXXXDNTVPGSRQERGVYEWSE-TEAARREPAIAKDYELPF 635
            ++  L +IGK   L AS+P  ++ AL C ++ M+ A+GLSNL++ +  SSRN+ ++G S+FF L +P+Y +Q                        P  +   G++ V+N                 DNT+PG+ +ERG+ +W +      +     + Y LPF
Sbjct:  465 LMLALGMIGKFSALFASLPDPVLGALFCTLFGMITAVGLSNLQFIDLNSSRNLFVLGFSIFFGLVLPSYLRQ-----------------------NPLVTGITGIDQVLNVLLTTAMFVGGCVAFILDNTIPGTPEERGIRKWKKGVGKGNKSLDGMESYNLPF 605          
BLAST of CF831969 vs. ExPASy Swiss-Prot
Match: S23A1_RAT (Solute carrier family 23 member 1 OS=Rattus norvegicus GN=Slc23a1 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.407e-16
Identity = 52/165 (31.52%), Postives = 78/165 (47.27%), Query Frame = 3
Query:  159 LSLIGKVGGLIASIPQVMVAALLCFMWAMLAALGLSNLRYSEAGSSRNIIIVGLSLFFSLSIPAYFQQYGISPNTNLSVPSYFQPYSVASHGPFRSKYGGVNYVMNTXXXXXXXXXXXXXXXXDNTVPGSRQERGVYEWSETEAARREP-AIAKDYELPFRVGRV 650
            L  IGK   L AS+P  ++  + C ++ M+ A+GLSNL++ +  SSRN+ ++G S+FF L++P Y      + NT   VP                    V+ ++                  DNTVPGS +ERG+ +W     A  E  A  K Y+ PF +G V
Sbjct:  417 LGAIGKFTALFASLPDPILGGMFCTLFGMITAVGLSNLQFVDMNSSRNLFVLGFSMFFGLTLPNYLDSNPGAINTG--VPE-------------------VDQILTVLLTTEMFVGGCLAFILDNTVPGSPEERGLIQWKAGAHANSETLASLKSYDFPFGMGMV 560          
BLAST of CF831969 vs. ExPASy Swiss-Prot
Match: NAT2_ARATH (Nucleobase-ascorbate transporter 2 OS=Arabidopsis thaliana GN=NAT2 PE=2 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 3.407e-16
Identity = 51/164 (31.10%), Postives = 82/164 (50.00%), Query Frame = 3
Query:  162 SLIGKVGGLIASIPQVMVAALLCFMWAMLAALGLSNLRYSEAGSSRNIIIVGLSLFFSLSIPAYFQQYGISPNTNLSVPSYFQPYSVASHGPFRSKYGGVNYVMNTXXXXXXXXXXXXXXXXDNTV--PGSRQERGVYEWSETEAARREPAIAKDYELPFRVGR 647
            S++GK G L ASIP  + AA+ C ++ ++A++GLS L+++   S RN+ IVG+SLF  LSIP YF+ + +                 A HGP  +  G  N  +NT                DNT+    + ++RG+  W++    + +    + Y LPF + R
Sbjct:  372 SMLGKFGALFASIPFTIFAAVYCVLFGLVASVGLSFLQFTNMNSLRNLFIVGVSLFLGLSIPEYFRDFSMK----------------ALHGPAHTNAGWFNDFLNTIFLSSPMVALMVAVFLDNTLDYKETARDRGLPWWAKFRTFKGDSRNEEFYTLPFNLNR 519          
BLAST of CF831969 vs. ExPASy Swiss-Prot
Match: S23A1_MOUSE (Solute carrier family 23 member 1 OS=Mus musculus GN=Slc23a1 PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 4.449e-16
Identity = 50/165 (30.30%), Postives = 77/165 (46.67%), Query Frame = 3
Query:  159 LSLIGKVGGLIASIPQVMVAALLCFMWAMLAALGLSNLRYSEAGSSRNIIIVGLSLFFSLSIPAYFQQYGISPNTNLSVPSYFQPYSVASHGPFRSKYGGVNYVMNTXXXXXXXXXXXXXXXXDNTVPGSRQERGVYEWSETEAARRE-PAIAKDYELPFRVGRV 650
            L  IGK   L AS+P  ++  + C ++ M+ A+GLSNL++ +  SSRN+ ++G S+FF L++P Y      + NT +                       V+ ++                  DNTVPGS +ERG+ +W     A  E  A  K Y+ PF +G V
Sbjct:  417 LGAIGKFTALFASLPDPILGGMFCTLFGMITAVGLSNLQFVDMNSSRNLFVLGFSMFFGLTLPNYLDSNPGAINTGIPE---------------------VDQILTVLLTTEMFVGGCLAFILDNTVPGSPEERGLIQWKAGAHANSETSASLKSYDFPFGMGMV 560          
BLAST of CF831969 vs. ExPASy Swiss-Prot
Match: S23A2_XENTR (Solute carrier family 23 member 2 OS=Xenopus tropicalis GN=slc23a2 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.811e-16
Identity = 48/164 (29.27%), Postives = 80/164 (48.78%), Query Frame = 3
Query:  159 LSLIGKVGGLIASIPQVMVAALLCFMWAMLAALGLSNLRYSEAGSSRNIIIVGLSLFFSLSIPAYFQQYGISPNTNLSVPSYFQPYSVASHGPFRSKYGGVNYVMNTXXXXXXXXXXXXXXXXDNTVPGSRQERGVYEWSETEAARREPAI--AKDYELPFRVG 644
            L +IGK   L AS+P  ++ AL C ++ M+ A+GLSNL++ +  SSRN+ ++G S+FF L +P+Y +Q                        P  +    ++ V+N                 DNT+PG+ +ERG+ +W +    +    I   + Y+LPF +G
Sbjct:  467 LGMIGKFSALFASLPDPVLGALFCTLFGMITAVGLSNLQFVDLNSSRNLFVLGFSIFFGLMLPSYLKQ-----------------------NPLVTGIAEIDQVLNVLLTTAMFVGGCTAFILDNTIPGTPEERGIRKW-KRGVGKGTSGIEGMESYDLPFGMG 606          
BLAST of CF831969 vs. ExPASy Swiss-Prot
Match: NAT1_ARATH (Nucleobase-ascorbate transporter 1 OS=Arabidopsis thaliana GN=NAT1 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.767e-15
Identity = 52/164 (31.71%), Postives = 79/164 (48.17%), Query Frame = 3
Query:  162 SLIGKVGGLIASIPQVMVAALLCFMWAMLAALGLSNLRYSEAGSSRNIIIVGLSLFFSLSIPAYFQQYGISPNTNLSVPSYFQPYSVASHGPFRSKYGGVNYVMNTXXXXXXXXXXXXXXXXDNT--VPGSRQERGVYEWSETEAARREPAIAKDYELPFRVGR 647
            S +GK G + ASIP  + AAL C ++ ++AA+GLS L+++   S RN++I GLSLF  +SIP +F QY                +    +G   +  G  N  +NT                DNT  V  S+++RG+  W +    R +    + Y LPF + R
Sbjct:  368 STLGKFGAVFASIPVPIYAALHCILFGLVAAVGLSFLQFTNMNSMRNLMITGLSLFLGISIPQFFAQY----------------WDARHYGLVHTNAGWFNAFLNTLFMSPATVGLIIAVFMDNTMEVERSKKDRGMPWWVKFRTFRGDNRNEEFYTLPFNLNR 515          
The following BLAST results are available for this feature:
BLAST of CF831969 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
NAT12_ARATH3.835e-6875.45Nucleobase-ascorbate transporter 12 OS=Arabidopsis... [more]
NAT11_ARATH1.088e-3843.78Nucleobase-ascorbate transporter 11 OS=Arabidopsis... [more]
S23A2_RAT2.359e-1729.27Solute carrier family 23 member 2 OS=Rattus norveg... [more]
S23A2_MOUSE5.256e-1728.05Solute carrier family 23 member 2 OS=Mus musculus ... [more]
S23A2_HUMAN1.997e-1628.66Solute carrier family 23 member 2 OS=Homo sapiens ... [more]
S23A1_RAT3.407e-1631.52Solute carrier family 23 member 1 OS=Rattus norveg... [more]
NAT2_ARATH3.407e-1631.10Nucleobase-ascorbate transporter 2 OS=Arabidopsis ... [more]
S23A1_MOUSE4.449e-1630.30Solute carrier family 23 member 1 OS=Mus musculus ... [more]
S23A2_XENTR5.811e-1629.27Solute carrier family 23 member 2 OS=Xenopus tropi... [more]
NAT1_ARATH3.767e-1531.71Nucleobase-ascorbate transporter 1 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01B16_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01B16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF831969 ID=CF831969; Name=CF831969; organism=Citrus sinensis; type=EST; length=650bp
TTTTTTTTTTGCAGATAAATGAATTTTAATTAAGATATTAGTAGATAGAA
TAACATAATCTCACTCTAAGTGAGTTTCATGTACAATAAAATGGGATTAA
TGATTAAGGTTTCATTAATTTATGATCATTTAGAAGCAGACTGCTGGTTC
TTGCTGGCTTATCTCTCATAGGTAAAGTTGGAGGCCTCATCGCGTCAATT
CCCCAAGTCATGGTGGCTGCTCTCCTCTGTTTCATGTGGGCAATGCTGGC
AGCATTAGGACTATCTAATCTACGGTATAGTGAAGCTGGAAGTTCTCGCA
ATATTATCATAGTTGGGCTATCTTTATTCTTTTCTCTGTCCATACCCGCC
TACTTCCAGCAATATGGCATCTCTCCAAATACCAACCTGTCTGTCCCAAG
TTACTTTCAGCCATATAGTGTGGCTTCTCATGGACCTTTCCGCAGCAAAT
ATGGAGGGGTGAACTATGTTATGAACACTTTACTATCACTGCATGTGGTT
GTTGCATTCCTCTTTGCTGTTGTCTTAGATAATACAGTGCCTGGCAGTCG
GCAAGAACGTGGGGTGTATGAGTGGTCGGAAACTGAGGCTGCAAGGAGGG
AGCCAGCTATTGCCAAAGATTATGAATTGCCGTTCAGAGTTGGTAGGGTT
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