CF831990

Overview
NameCF831990
Unique NameCF831990
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length672
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF831990 vs. ExPASy Swiss-Prot
Match: UMP1_ARATH (Uncharacterized protein At3g15000, mitochondrial OS=Arabidopsis thaliana GN=At3g15000 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.491e-27
Identity = 73/157 (46.50%), Postives = 83/157 (52.87%), Query Frame = -1
Query:  256 PPQNKYGGTPPPQNNYGGTPPPQSNYGGTPPPQ----SNYGGTPPPQNNYGG-------APPPQNNYGGTPPPQNYGGTPPQNNYGGTPPPQNNYGGMQPPPNYNSG---NMGGMPPNARWSGNTPGNMNQNADG-----PSFQNSYTPRQ*N*GMP 669
            PPQ    G PPP  + GG+ PP  + GG+ PP      NYG  PPP NN GG         PPQNN GG  PPQNYGGTPP  NYGG  PP NN GG  PPPNY  G     G +PP  ++ G  P N N    G     P +QN+Y P +   G P
Sbjct:  242 PPQRPPMGGPPPPPHIGGSAPPPPHMGGSAPPPPHMGQNYG--PPPPNNMGGPRHPPPYGAPPQNNMGGPRPPQNYGGTPPP-NYGGA-PPANNMGG-APPPNYGGGPPPQYGAVPP-PQYGGAPPQNNNYQQQGSGMQQPQYQNNYPPNRDGSGNP 392          
BLAST of CF831990 vs. ExPASy Swiss-Prot
Match: FH20_ARATH (Formin-like protein 20 OS=Arabidopsis thaliana GN=FH20 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 6.391e-13
Identity = 40/103 (38.83%), Postives = 46/103 (44.66%), Query Frame = -1
Query:  361 PPQNKYGGTPPPQNNYGGTPPPQSNYGGTPPPQSNYGGTPPPQNNYGGAPPPQNNYGGTPPPQNYGGTPPQNNYGGTPPPQNNYGGMQPPPNYNSGNMGGMPP 669
            PP   YG  PPP       PPP  +YG  PPP       PPP  +YG  PPP       PPP  YG  PP       PPP  +YG   PPP     ++  +PP
Sbjct:  935 PPPPSYGSPPPP-------PPPPPSYGSPPPP-------PPPPPSYGSPPPPP------PPPPGYGSPPPP------PPPPPSYGSPPPPPPPPFSHVSSIPP 1011          

HSP 2 Score: 73.9442 bits (180), Expect = 8.347e-13
Identity = 49/121 (40.50%), Postives = 56/121 (46.28%), Query Frame = -1
Query:  361 PPQNKYGGTPPPQN---NYGGTPPPQ-------SNYGGTPPPQSNYGGTPPPQNN---YGGA---PPPQNNYGGTPPPQNYGGTPPQNNYGGT--PPPQNNYGGMQPPPNYNSGNMGGMPP 669
            PP   YG  PPP     +YG  PPP        S+    PPP   +GG PPP      +GGA   PPP   +GG PPP      PP   +GG   PPP   +GG QPPP       GG PP
Sbjct:  974 PPPPGYGSPPPPPPPPPSYGSPPPPPPPPFSHVSSIPPPPPPPPMHGGAPPPPPPPPMHGGAPPPPPPPPMHGGAPPP-----PPPPPMHGGAPPPPPPPMFGGAQPPP--PPPMRGGAPP 1087          

HSP 3 Score: 72.4034 bits (176), Expect = 2.429e-12
Identity = 47/111 (42.34%), Postives = 50/111 (45.05%), Query Frame = -1
Query:  361 PPQNKYGGTPPPQNN--YGGT--PPPQSNYGGTPPPQSN--YGGTPPPQNN--YGGAPPPQNNYGGTPPPQNYGGTPPQNNYGGTPPPQNNYGGMQPPPNYNSGNMGGMPP 669
            PP   +GG PPP     +GG   PPP    GG PPP      GG PPP      GGAPPP       PPP  +GG PP       PPP    GG  PPP    G   G PP
Sbjct: 1053 PPPPMHGGAPPPPPPPMFGGAQPPPPPPMRGGAPPPPPPPMRGGAPPPPPPPMRGGAPPP-------PPPPMHGGAPP-------PPPPPMRGGAPPPPPPPGGRGPGAPP 1149          

HSP 4 Score: 70.8626 bits (172), Expect = 7.066e-12
Identity = 47/119 (39.50%), Postives = 50/119 (42.02%), Query Frame = -1
Query:  331 PPQNKYGGTPPPQNNYGGTPPPQSNYGGTPPPQSN--YGGT--PPPQNNYGGAPPPQNN--YGGTPPPQNYGGTPPQNNYGGTPPPQNNYGGMQPPPNYNSGNMGGMPPNARWSGNTPG 669
            PP   +GG PPP       PPP   +GG PPP     +GG   PPP    GGAPPP      GG PPP      PP    G  PPP     G  PPP       G  PP     G  PG
Sbjct: 1040 PPPPMHGGAPPP-------PPPPPMHGGAPPPPPPPMFGGAQPPPPPPMRGGAPPPPPPPMRGGAPPPP-----PPPMRGGAPPPPPPPMHGGAPPPPPPPMRGGAPPPPPPPGGRGPG 1146          

HSP 5 Score: 67.781 bits (164), Expect = 5.982e-11
Identity = 43/122 (35.25%), Postives = 48/122 (39.34%), Query Frame = -1
Query:  334 PPQNKYGGTPPPQNNYGGTPPPQSNYGGTPPPQS---NYGGTPPPQ-------NNYGGAPPPQNNYGGTPPPQNYGGTPPQNNYGGTPPPQNNYGGMQPPPNYNSGNMGGMPPNARWSGNTP 669
            PP   YG  PPP       PPP   YG  PPP     +YG  PPP        ++    PPP   +GG PPP      PP   +GG PPP        PPP    G     PP     G  P
Sbjct:  961 PPPPSYGSPPPP-------PPPPPGYGSPPPPPPPPPSYGSPPPPPPPPFSHVSSIPPPPPPPPMHGGAPPPP-----PPPPMHGGAPPP--------PPPPPMHGGAPPPPPPPPMHGGAP 1062          
BLAST of CF831990 vs. ExPASy Swiss-Prot
Match: MCA1A_ASPFU (Metacaspase-1A OS=Aspergillus fumigatus GN=casA PE=3 SV=3)

HSP 1 Score: 69.707 bits (169), Expect = 1.574e-11
Identity = 42/89 (47.19%), Postives = 47/89 (52.81%), Query Frame = -1
Query:  361 QSNYGGTPPPQSNYGGTPPPQNNYG-GAPPPQNNYGGTPPPQNYGGTPPQNNYGGTPPPQNN--YGGMQPPPN-----YNSGNMGGMPP 603
            QS+YGG  P Q+ Y    PP N YG G P PQ  YG  PP   YG   P + YG  PPP  N  YGG QP  N     Y+ G+ GG PP
Sbjct:    8 QSSYGGGYPGQA-YREQHPPPNPYGYGQPSPQPGYGAPPPHNGYG--QPPSGYGQPPPPTGNAVYGGRQPGMNQYQNTYSHGHQGGPPP 93          
BLAST of CF831990 vs. ExPASy Swiss-Prot
Match: MCA1A_ASPFC (Metacaspase-1A OS=Aspergillus fumigatus (strain CEA10 / CBS 144.89 / FGSC A1163) GN=casA PE=3 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.574e-11
Identity = 42/89 (47.19%), Postives = 47/89 (52.81%), Query Frame = -1
Query:  361 QSNYGGTPPPQSNYGGTPPPQNNYG-GAPPPQNNYGGTPPPQNYGGTPPQNNYGGTPPPQNN--YGGMQPPPN-----YNSGNMGGMPP 603
            QS+YGG  P Q+ Y    PP N YG G P PQ  YG  PP   YG   P + YG  PPP  N  YGG QP  N     Y+ G+ GG PP
Sbjct:    8 QSSYGGGYPGQA-YREQHPPPNPYGYGQPSPQPGYGAPPPHNGYG--QPPSGYGQPPPPTGNAVYGGRQPGMNQYQNTYSHGHQGGPPP 93          
BLAST of CF831990 vs. ExPASy Swiss-Prot
Match: RB97D_DROME (Ribonucleoprotein RB97D OS=Drosophila melanogaster GN=Rb97D PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.507e-11
Identity = 47/122 (38.52%), Postives = 52/122 (42.62%), Query Frame = -1
Query:  334 LPPQNKYGG---TPPPQNNYGGTPPPQSNYGGTPPP-QSNYGGTPPPQ--NNYGGAPPPQNNYGGTPPPQNYGGTPPQNNYGGTPPPQNN---YGGMQPPPNYNSGNMGGMPPNARWSGNTP 672
            +PPQ   G     PPP       PPP  NY G PPP    Y   PPPQ  N +G  PPPQ N    PPP   G      N  G PPP       G + PP  +N     G PP A  + N P
Sbjct:  248 VPPQQAMGPYQQQPPPAPM--SAPPPNFNYWGPPPPAMPPYYQQPPPQQMNGWGPYPPPQQNGWNAPPPPPPGAQQWHANQWGCPPPVQQVPPVGAVPPPMGHN-----GPPPTAPGNWNMP 362          
BLAST of CF831990 vs. ExPASy Swiss-Prot
Match: FORA_DICDI (Formin-A OS=Dictyostelium discoideum GN=forA PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.507e-11
Identity = 40/94 (42.55%), Postives = 41/94 (43.62%), Query Frame = -1
Query:  361 PPPQNNYGGTPPPQSNYGGTPPPQSNYGGTPPPQNNYGGAPPPQNNYGGTPPPQNYGGTPPQNNYGGTPPPQNNYGGMQPPPNYNSGNMGGMPP 642
            PPP    GG PPP       PPP +  GG PPP       PPP    GG PPP      PP    GG PPP    GG  PPP    G   G PP
Sbjct:  653 PPPPMTGGGAPPPPP----PPPPMTGGGGPPPPP------PPPPMTGGGPPPPP----PPPPMTGGGPPPPPPPPGGGPPPPPPPPGAKAGGPP 732          
BLAST of CF831990 vs. ExPASy Swiss-Prot
Match: SEPA_EMENI (Cytokinesis protein sepA OS=Emericella nidulans GN=sepA PE=3 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 7.813e-11
Identity = 41/112 (36.61%), Postives = 44/112 (39.29%), Query Frame = -1
Query:  316 GGTPPPQNNYGGTPPPQSNYGGTPPPQSNYGGTPPPQNNYGGAPPPQNNYGGTPPPQNYGGTPPQNNYGGTPPPQNNYGGMQPPPNYNSGNMGGMPPNARWSGNTPGNMNQN 651
            G  PPP       PPP    G  PPP       PPP    GG PPP       PPP  +GG PP       PPP   +GG  PPP    G   G+PP     G   G    N
Sbjct: 1031 GAAPPPPPP---PPPPPPGAGAAPPPPPP--PPPPPPGGLGGPPPPPP----PPPPGGFGGPPPP------PPPPGGFGGPPPPPPPPPGGAFGVPPPPPPPGTVIGGWRAN 1127          
The following BLAST results are available for this feature:
BLAST of CF831990 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
UMP1_ARATH3.491e-2746.50Uncharacterized protein At3g15000, mitochondrial O... [more]
FH20_ARATH6.391e-1338.83Formin-like protein 20 OS=Arabidopsis thaliana GN=... [more]
MCA1A_ASPFU1.574e-1147.19Metacaspase-1A OS=Aspergillus fumigatus GN=casA PE... [more]
MCA1A_ASPFC1.574e-1147.19Metacaspase-1A OS=Aspergillus fumigatus (strain CE... [more]
RB97D_DROME3.507e-1138.52Ribonucleoprotein RB97D OS=Drosophila melanogaster... [more]
FORA_DICDI3.507e-1142.55Formin-A OS=Dictyostelium discoideum GN=forA PE=1 ... [more]
SEPA_EMENI7.813e-1136.61Cytokinesis protein sepA OS=Emericella nidulans GN... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_01C03_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF831990 ID=CF831990; Name=CF831990; organism=Citrus sinensis; type=EST; length=672bp
TTTTTTTTTTTCTTTTTATTTGAAATTGTAATTGTATTTTAGTCAAACCT
TAAAACAGATCTCAACATCTCTGTGCCAGAAGATAGCATCAATAAAATTC
CTGAAGTCTAGAAAACACTGAACATTGACAACATTAACCGAAGATCCAGG
CTATCATCCATACTTATCTACAACATGCCAAAAGTAGTCTACTCAGGGGA
AGGAGTACAACACAATATGTCTGGGCATGTTTCAAGCCTGGTAAAGGTTT
CCACCAGGCATGCCTCAATTTCACTGTCTTGGTGTGTAGCTATTCTGAAA
GGAAGGACCATCTGCATTCTGGTTCATATTCCCAGGCGTGTTGCCTGACC
ATCTGGCATTCGGCGGCATTCCTCCCATGTTCCCTGAGTTGTAATTAGGA
GGTGGCTGCATTCCTCCATAATTATTTTGTGGCGGTGGAGTTCCTCCATA
GTTGTTCTGTGGTGGTGTTCCTCCATAGTTCTGTGGTGGCGGCGTTCCTC
CATAGTTGTTCTGCGGTGGCGGCGCTCCTCCATAGTTGTTCTGCGGTGGC
GGCGTTCCTCCATAGTTGCTCTGGGGTGGCGGCGTTCCTCCATAGTTGCT
CTGTGGTGGCGGCGTCCCTCCATAGTTGTTCTGTGGTGGCGGCGTCCCTC
CATACTTGTTCTGTGGTGGCAG
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