CF831993

Overview
NameCF831993
Unique NameCF831993
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length796
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8418 contig Csv1_Contig8418:795..1590. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF831993 vs. ExPASy Swiss-Prot
Match: ETOL1_ARATH (ETO1-like protein 1 OS=Arabidopsis thaliana GN=EOL1 PE=1 SV=1)

HSP 1 Score: 358.992 bits (920), Expect = 1.729e-98
Identity = 178/203 (87.68%), Postives = 188/203 (92.61%), Query Frame = -3
Query:  183 DSSCSSTVVSLLEDALKCPSDRLRKGQALNNLGSVYVDCGQLDLAADCYSNALKIRHTRAHQGLARVHFLKNNKTTAYEEMTKLIKKARNNASAYEKRSEYCDRELTRADLEMVTQLDPLRVYPYRYRAAVLMDSHKENEAIAELSRAIAFKADLHLLHLRAAFHEHTGDVLGALRDCRAALSVDPNDQEMLELHSRVYSHEP 791
            D S SSTVVSLLEDALKCPSDRLRKGQALNNLGSVYVDC +LDLAADCY NALK+RHTRAHQGLARVHFL+N+K  AYEEMT+LI+KA+NNASAYEKRSEYCDREL ++DLEMVT+LDPLRVYPYRYRAAVLMDS KE EAI ELSRAIAFKADLHLLHLRAAFHEH GDV  ALRDCRAALSVDPN QEMLELHSRV SHEP
Sbjct:  686 DPSSSSTVVSLLEDALKCPSDRLRKGQALNNLGSVYVDCEKLDLAADCYINALKVRHTRAHQGLARVHFLRNDKAAAYEEMTRLIEKAQNNASAYEKRSEYCDRELAKSDLEMVTRLDPLRVYPYRYRAAVLMDSRKEREAITELSRAIAFKADLHLLHLRAAFHEHIGDVTSALRDCRAALSVDPNHQEMLELHSRVNSHEP 888          

HSP 2 Score: 90.5077 bits (223), Expect = 1.147e-17
Identity = 53/165 (32.12%), Postives = 83/165 (50.30%), Query Frame = -3
Query:  189 AADCYSNALKIRHTRAHQGLARVHFLKNNKTTAYEEMTKLIKKARNNAS-AYEKRSEYCDRELTRADLEMVTQLDPLRVYPYRYRAAVLMDSHKENEAIAELSRAIAFKADLHLLHLRAAFHEHTGDVLGALRDCRAALSVDPNDQEML-------ELHSRVYSH 659
            A + +  A  + H  +  GLAR+ +++ ++  AYE+++ +I          Y++RS YC+ +    DLE  T+LDP   YPY YRA   M       A+ E++R + FK  L  L +R   +    D   ALRD +AAL++ P D  M        +L + VY H
Sbjct:  400 AEEAFETAFNLGHVYSATGLARLGYIQGHRLWAYEKLSSVISSVSPPLGWMYQERSFYCEGDKKLEDLEKATELDPTLTYPYMYRAVTRMSKQNAKAALEEINRILGFKLALECLEIRFCLYLGMDDYEAALRDIQAALTLCP-DYRMFDGKVAGRQLQTLVYEH 563          
BLAST of CF831993 vs. ExPASy Swiss-Prot
Match: ETO1_ARATH (Ethylene-overproduction protein 1 OS=Arabidopsis thaliana GN=ETO1 PE=1 SV=2)

HSP 1 Score: 285.419 bits (729), Expect = 2.430e-76
Identity = 138/197 (70.05%), Postives = 165/197 (83.76%), Query Frame = -3
Query:  201 DSSCSSTVVSLLEDALKCPSDRLRKGQALNNLGSVYVDCGQLDLAADCYSNALKIRHTRAHQGLARVHFLKNNKTTAYEEMTKLIKKARNNASAYEKRSEYCDRELTRADLEMVTQLDPLRVYPYRYRAAVLMDSHKENEAIAELSRAIAFKADLHLLHLRAAFHEHTGDVLGALRDCRAALSVDPNDQEMLELHSR 791
            D   S+ V+ LL++ALKCPSD LRKGQALNNLGSVYVDC +LDLAADCY+NAL I+HTRAHQGLARV+ LKN +  AY+EMTKLI+KA+NNASAYEKRSEYCDRE+ ++DL + TQLDPLR YPYRYRAAVLMD HKE+EAI ELSRAI+FK DL LLHLRAAF++  G+   A++DC AAL +DP   + LEL+ +
Sbjct:  747 DPDSSNYVIQLLQEALKCPSDGLRKGQALNNLGSVYVDCEKLDLAADCYTNALTIKHTRAHQGLARVYHLKNQRKAAYDEMTKLIEKAQNNASAYEKRSEYCDREMAQSDLCLATQLDPLRTYPYRYRAAVLMDDHKESEAIDELSRAISFKPDLQLLHLRAAFYDSMGEGASAIKDCEAALCIDPGHADTLELYHK 943          

HSP 2 Score: 105.145 bits (261), Expect = 4.501e-22
Identity = 60/188 (31.91%), Postives = 103/188 (54.79%), Query Frame = -3
Query:  231 QDSSCSSTVVSLLEDALKCPSDRLRKGQALNNLGSVYVDCGQLDLAADCYSNALKIRHTRAHQGLARVHFLKNNKTTAYEEMTKLIKKARNNASAYEKRSEYCDRELTRADLEMVTQLDPLRVYPYRYRAAVLMDSHKENEAIAELSRAIAFKADLHLLHLRAAFHEHTGDVLGALRDCRAALSVDPN 794
            +D   S+T V LLE  ++C  D   K  A + LG V ++  +   A   ++ A++  H  +  G+AR  F ++++ +AY+ +  LI   +     +++RS YC  +    DL+  T+ DP   +PY++RA  L++ ++   AIAEL++ + FKA    L +RA       D  GAL+D RA L+++PN
Sbjct:  417 EDDMKSNTTVMLLERLVECAVDSWEKQLAYHQLGVVMLERKEYKDAQRWFNAAVEAGHLYSLVGVARTKFKRDHRYSAYKIINSLISDHKATGWMHQERSLYCSGKEKLLDLDTATEFDPTLTFPYKFRAVALVEENQFGAAIAELNKILGFKASPDCLEMRAWISIGMEDYEGALKDIRALLTLEPN 604          
BLAST of CF831993 vs. ExPASy Swiss-Prot
Match: ETOL2_ARATH (ETO1-like protein 2 OS=Arabidopsis thaliana GN=EOL2 PE=1 SV=2)

HSP 1 Score: 251.906 bits (642), Expect = 2.977e-66
Identity = 125/197 (63.45%), Postives = 153/197 (77.66%), Query Frame = -3
Query:  201 DSSCSSTVVSLLEDALKCPSDRLRKGQALNNLGSVYVDCGQLDLAADCYSNALKIRHTRAHQGLARVHFLKNNKTTAYEEMTKLIKKARNNASAYEKRSEYCDRELTRADLEMVTQLDPLRVYPYRYRAAVLMDSHKENEAIAELSRAIAFKADLHLLHLRAAFHEHTGDVLGALRDCRAALSVDPNDQEMLELHSR 791
            D+   S VV +LE+ALKCPSD LRKGQALNNLGS+Y++ G LD A   Y NA++I+H RA QGLARV+FLKN +  A EEMTKLI+K+ + A+AYEKRSEYC+RE  + DL+M T LDPLR YPYRYRAAVLMD  +E EA+ ELS+AIAF+ +L  LHLRAAFHE TG++  A +DC AAL +DPN  E L L+SR
Sbjct:  713 DADEISCVVQVLEEALKCPSDGLRKGQALNNLGSIYINLGMLDQAETAYKNAIEIKHIRARQGLARVYFLKNQRKEACEEMTKLIEKSCSKAAAYEKRSEYCEREKAKEDLDMATTLDPLRTYPYRYRAAVLMDDQRETEAVEELSKAIAFRPELQTLHLRAAFHEATGNLSLATQDCEAALCLDPNHTETLHLYSR 909          

HSP 2 Score: 87.8113 bits (216), Expect = 7.436e-17
Identity = 56/188 (29.79%), Postives = 90/188 (47.87%), Query Frame = -3
Query:  231 QDSSCSSTVVSLLEDALKCPSDRLRKGQALNNLGSVYVDCGQLDLAADCYSNALKIRHTRAHQGLARVHFLKNNKTTAYEEMTKLIKKARNNASAYEKRSEYCDRELTRADLEMVTQLDPLRVYPYRYRAAVLMDSHKENEAIAELSRAIAFKADLHLLHLRAAFHEHTGDVLGALRDCRAALSVDPN 794
            ++   + T++ LLE   +      +K  +L+ +G V  +      A   +  A  + H  +  G++R  + +  + +AY  M  LI   + +   Y++RS Y        DL   T+LDP   +PY+YRA +  +  +  EA  E+ R I FK     L LRA  +  TGD    LRD RA LS++PN
Sbjct:  383 EEKLTTDTMLILLERTREFARTNWQKALSLHQMGCVLFERKDYKAAQFHFRLASSLGHVYSLAGVSRTEYKQGKRYSAYRLMNFLISNHKPHGWMYQERSLYNVGVEKLKDLATATELDPTLSFPYKYRAVMKFEQKQIKEAFQEIDRLIQFKLSPECLELRAWLYLATGDRESCLRDLRAVLSLEPN 570          
The following BLAST results are available for this feature:
BLAST of CF831993 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
ETOL1_ARATH1.729e-9887.68ETO1-like protein 1 OS=Arabidopsis thaliana GN=EOL... [more]
ETO1_ARATH2.430e-7670.05Ethylene-overproduction protein 1 OS=Arabidopsis t... [more]
ETOL2_ARATH2.977e-6663.45ETO1-like protein 2 OS=Arabidopsis thaliana GN=EOL... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_01C05_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF831993 ID=CF831993; Name=CF831993; organism=Citrus sinensis; type=EST; length=796bp
TTTTTTTTTTTTTTTGATTATCAAAATCCACAATGACAGATTACCGCCTT
TAAAAAATGGAGGAGAAAAGAGGGACAAAAATGACATGCCTTTTACTTAC
ACACTCGTATCTATGTATACACGGTGATTATACAATTCTCTTTTCTCACA
TTTTCGTCTTTAACAGTCTTGTTCAACATTTATGGTTCATGGCTGTATAC
ACGGCTATGAAGCTCCAGCATTTCTTGATCATTTGGATCAACAGAGAGAG
CTGCTCGACAATCTCGCAAAGCCCCCAATACATCGCCAGTGTGCTCATGA
AATGCAGCTCGCAGGTGTAGAAGGTGAAGGTCTGCTTTGAATGCGATTGC
CCTTGATAGCTCTGCAATTGCTTCATTCTCTTTGTGGCTGTCCATTAAAA
CTGCAGCTCGATATCTATAAGGGTAAACCCGGAGGGGATCTAATTGAGTG
ACCATCTCTAGATCTGCCCTTGTGAGTTCACGATCACAGTATTCAGATCT
CTTTTCATAGGCAGATGCATTGTTCCGAGCCTTCTTAATCAGTTTCGTCA
TTTCCTCGTATGCCGTTGTTTTATTATTTTTCAGAAAATGAACCCGAGCA
AGACCCTGGTGAGCGCGGGTATGCCGGATCTTTAGTGCATTGCTGTAGCA
ATCAGCAGCCAAGTCCAACTGCCCACAGTCAACATAAACACTTCCTAGAT
TGTTCAGTGCCTGACCTTTGCGCAGCCTGTCTGAGGGGCACTTCAAGGCA
TCTTCAAGCAGTGAAACAACAGTTGAAGAACAAGATGAATCCTGGC
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