CF832002
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832002 vs. ExPASy Swiss-Prot
Match: FLA17_ARATH (Fasciclin-like arabinogalactan protein 17 OS=Arabidopsis thaliana GN=FLA17 PE=2 SV=1) HSP 1 Score: 333.183 bits (853), Expect = 9.656e-91 Identity = 170/255 (66.67%), Postives = 190/255 (74.51%), Query Frame = 2 Query: 2 SHYTXXXXXXXXXXXXQTLEEAVGRHNITIFAPKNEALERELDPEFKRFLLEPGNLKSLQTLLMFHILPSRIGSRNWPDEKSGSRKHNTLWNDFVHLSSKSTKRLIGSAEIFRPDDITRPDGVIHGIERLLVPRSVQEDFNRRRNLRSISAVLPQGAPEVDPRTHRLKKXXXXXXXXXXXXXXIYDXXXXXXXXXXXXXXXXXXXHRHFNGERQVKDFIHTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVL 766 S YT QTLE+AVGRHNITIFAP+NEALER+LDPEFKRFLLEPGNLKSLQTLLMFHI+P+R+GS WP E+SG KH+TL ND V LS+ K+++ AEI RPDD+TRPDG+IHGIERLL+PRSVQEDFNRRR+L+SISAVLP+GAPEVDPRT+RLKK I HF+GE QVKDFIHTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVL Sbjct: 54 SRYTELAELVEKALLLQTLEDAVGRHNITIFAPRNEALERDLDPEFKRFLLEPGNLKSLQTLLMFHIIPNRVGSNQWPSEESGRVKHHTLGNDQVRLSNGQGKKMVDLAEIIRPDDLTRPDGLIHGIERLLIPRSVQEDFNRRRSLQSISAVLPEGAPEVDPRTNRLKKPAAPVPAGSPPALPIQSAMAPGPSLAPAPAPGPGGKQHHFDGEAQVKDFIHTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVL 308
BLAST of CF832002 vs. ExPASy Swiss-Prot
Match: FLA18_ARATH (Fasciclin-like arabinogalactan protein 18 OS=Arabidopsis thaliana GN=FLA18 PE=2 SV=1) HSP 1 Score: 320.472 bits (820), Expect = 6.477e-87 Identity = 172/261 (65.90%), Postives = 191/261 (73.18%), Query Frame = 2 Query: 2 SHYTXXXXXXXXXXXXQTLEEAVGRHNITIFAPKNEALERELDPEFKRFLLEPGNLKSLQTLLMFHILPSRIGSRNWPDEKSGSRKHNTLWNDFV-HLSS-KST--KRLIGSAEIFRPDDITRPDGVIHGIERLLVPRSVQEDFNRRRNLRSISAVLPQGAPEVDPRTHRLKK--XXXXXXXXXXXXXXIYDXXXXXXXXXXXXXXXXXXXHRHFNGERQVKDFIHTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVL 766 S YT QTLE+AVGRHNITIFAP+NEALER+LDP+FKRFLL+PGNLKSLQTLL+ HI+P R+GS WP+E SG KH TL +D V HLS K T KRL+ SA I RPDD+TRPDG+IHGIERLL+PRSVQEDFNRRRNLRSISAVLP+GAPE+DPRT+RLKK I H+HFNG+ QVKDFIHTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVL Sbjct: 51 SRYTELAELVEKALLLQTLEDAVGRHNITIFAPRNEALERDLDPDFKRFLLQPGNLKSLQTLLLSHIIPKRVGSNQWPEENSGRVKHVTLGHDQVLHLSKLKGTNGKRLVNSAVITRPDDLTRPDGLIHGIERLLIPRSVQEDFNRRRNLRSISAVLPEGAPEIDPRTNRLKKSATAVSVPAGSPPVLPIESAMAPGPSLAPAPAPGPGGAHKHFNGDAQVKDFIHTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVL 311
BLAST of CF832002 vs. ExPASy Swiss-Prot
Match: FLA16_ARATH (Fasciclin-like arabinogalactan protein 16 OS=Arabidopsis thaliana GN=FLA16 PE=2 SV=1) HSP 1 Score: 315.079 bits (806), Expect = 2.721e-85 Identity = 166/255 (65.10%), Postives = 180/255 (70.59%), Query Frame = 2 Query: 2 SHYTXXXXXXXXXXXXQTLEEAVGRHNITIFAPKNEALERELDPEFKRFLLEPGNLKSLQTLLMFHILPSRIGSRNWPDEKSGSRKHNTLWNDFVHLSSKSTKRLIGSAEIFRPDDITRPDGVIHGIERLLVPRSVQEDFNRRRNLRSISAVLPQGAPEVDPRTHRLKKXXXXXXXXXXXXXXIYDXXXXXXXXXXXXXXXXXXXHRHFNGERQVKDFIHTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVL 766 SHYT QTLEEAVG+HNITIFAP+N+ALER LDP FK FLLEP NLKSLQ+LLMFHILP RI S WP S S H TL ND +HL+ + SAEI RPDD+ RPDG+IHGIERLL+PRSVQEDFNRRR+LRSISAV+P+GAPEVDPRTHRLKK IYD HFNG+ QVKDFIHTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVL Sbjct: 46 SHYTELAELVEKALLLQTLEEAVGKHNITIFAPRNDALERNLDPLFKSFLLEPRNLKSLQSLLMFHILPKRITSPQWP---SLSHHHRTLSNDHLHLTVDVNTLKVDSAEIIRPDDVIRPDGIIHGIERLLIPRSVQEDFNRRRSLRSISAVIPEGAPEVDPRTHRLKKPSPAVPAGAPPVLPIYDAMSPGPSLAPAPAPGPGGPRGHFNGDAQVKDFIHTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVL 297
BLAST of CF832002 vs. ExPASy Swiss-Prot
Match: FLA15_ARATH (Fasciclin-like arabinogalactan protein 15 OS=Arabidopsis thaliana GN=FLA15 PE=2 SV=1) HSP 1 Score: 307.375 bits (786), Expect = 5.674e-83 Identity = 163/255 (63.92%), Postives = 179/255 (70.20%), Query Frame = 2 Query: 2 SHYTXXXXXXXXXXXXQTLEEAVGRHNITIFAPKNEALERELDPEFKRFLLEPGNLKSLQTLLMFHILPSRIGSRNWPDEKSGSRKHNTLWNDFVHLSSKSTKRLIGSAEIFRPDDITRPDGVIHGIERLLVPRSVQEDFNRRRNLRSISAVLPQGAPEVDPRTHRLKKXXXXXXXXXXXXXXIYDXXXXXXXXXXXXXXXXXXXHRHFNGERQVKDFIHTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVL 766 SHYT QTLEEAVG+HNITIFAP+N+ALE+ LDPEFK FLL+P NLKSLQ+LLMFHILP RI S P S H TL ND +H T + SAEI +PDD+TRPDG+IHGIERLL+PRSVQEDFNRRR+LRSI+AVLP+GAPEVDPRTHRLKK +YD HFNGE QVKDFIHTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVL Sbjct: 42 SHYTELAELVEKALLLQTLEEAVGQHNITIFAPRNDALEKNLDPEFKSFLLQPKNLKSLQSLLMFHILPKRITS---PQFSSAVVSHRTLSNDHLHF----TNGKVNSAEITKPDDLTRPDGIIHGIERLLIPRSVQEDFNRRRSLRSIAAVLPEGAPEVDPRTHRLKKKPAPIPAGAPPVLPVYDAMSPGPSLAPAPAPGPGGPRHHFNGEAQVKDFIHTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVL 289 The following BLAST results are available for this feature:
BLAST of CF832002 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF832002 ID=CF832002; Name=CF832002; organism=Citrus sinensis; type=EST; length=768bpback to top |