CF832025

Overview
NameCF832025
Unique NameCF832025
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length662
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1001 contig Csv1_Contig1001:1..662. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832025 vs. ExPASy Swiss-Prot
Match: EF2_BETVU (Elongation factor 2 OS=Beta vulgaris PE=2 SV=1)

HSP 1 Score: 426.402 bits (1095), Expect = 6.387e-119
Identity = 206/219 (94.06%), Postives = 216/219 (98.63%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCK 661
            IWMGKKQETVEDVPCGNTVA+VGLDQ+ITKNATLTNEKE DAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVC+IEESGEHI+AGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVL++S RTVMSKSPNKHNRLYMEARP+EEGLAEAID+GRIGPRDDPK RSKIL+EE+GWDKDLAKKIWCFGPETTGPNMVVDMCK
Sbjct:  434 IWMGKKQETVEDVPCGNTVALVGLDQYITKNATLTNEKESDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSIEESGEHIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLDRSVRTVMSKSPNKHNRLYMEARPMEEGLAEAIDEGRIGPRDDPKNRSKILAEEYGWDKDLAKKIWCFGPETTGPNMVVDMCK 652          
BLAST of CF832025 vs. ExPASy Swiss-Prot
Match: EF2_CHLKE (Elongation factor 2 OS=Chlorella kessleri PE=2 SV=1)

HSP 1 Score: 366.696 bits (940), Expect = 6.006e-101
Identity = 181/217 (83.41%), Postives = 199/217 (91.71%), Query Frame = 2
Query:   11 MGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCK 661
            MG++QE VEDVPCGNTVA+VGLDQFITKNATLT+EK  DAH I+AMKFSVSPVVRVAV+ KVASDLPKLVEGLKRLAKSDPMV CTIEE+GEHI+AGAGELHLEICLKDLQDDFMGGAEI  S+PVVSFRETV+  S   VMSKSPNKHNRLYM+ARP+E+GLAEAID+G+IGPRDDPK RSKILSEEFGWDK+LAKKI  FGP+TTGPNMV D+ K
Sbjct:  438 MGRRQEAVEDVPCGNTVALVGLDQFITKNATLTDEKCEDAHTIKAMKFSVSPVVRVAVEPKVASDLPKLVEGLKRLAKSDPMVQCTIEETGEHIIAGAGELHLEICLKDLQDDFMGGAEIRVSEPVVSFRETVIGTSDHVVMSKSPNKHNRLYMQARPMEDGLAEAIDEGKIGPRDDPKVRSKILSEEFGWDKELAKKILAFGPDTTGPNMVTDITK 654          
BLAST of CF832025 vs. ExPASy Swiss-Prot
Match: EF2_RAT (Elongation factor 2 OS=Rattus norvegicus GN=Eef2 PE=1 SV=4)

HSP 1 Score: 274.633 bits (701), Expect = 3.106e-73
Identity = 138/219 (63.01%), Postives = 169/219 (77.17%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCK 661
            + MG+  E +EDVPCGN V +VG+DQF+ K  T+T  +   AH +R MKFSVSPVVRVAV+ K  +DLPKLVEGLKRLAKSDPMV C IEESGEHI+AGAGELHLEICLKDL++D      I KSDPVVS+RETV E+S    +SKSPNKHNRLYM+ARP  +GLAE ID G +  R + KAR++ L+E++ WD   A+KIWCFGP+ TGPN++ D+ K
Sbjct:  452 LMMGRYVEPIEDVPCGNIVGLVGVDQFLVKTGTITTFEH--AHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIIEESGEHIIAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKARARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITK 667          
BLAST of CF832025 vs. ExPASy Swiss-Prot
Match: EF2_MOUSE (Elongation factor 2 OS=Mus musculus GN=Eef2 PE=1 SV=2)

HSP 1 Score: 274.633 bits (701), Expect = 3.106e-73
Identity = 138/219 (63.01%), Postives = 169/219 (77.17%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCK 661
            + MG+  E +EDVPCGN V +VG+DQF+ K  T+T  +   AH +R MKFSVSPVVRVAV+ K  +DLPKLVEGLKRLAKSDPMV C IEESGEHI+AGAGELHLEICLKDL++D      I KSDPVVS+RETV E+S    +SKSPNKHNRLYM+ARP  +GLAE ID G +  R + KAR++ L+E++ WD   A+KIWCFGP+ TGPN++ D+ K
Sbjct:  452 LMMGRYVEPIEDVPCGNIVGLVGVDQFLVKTGTITTFEH--AHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIIEESGEHIIAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKARARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITK 667          
BLAST of CF832025 vs. ExPASy Swiss-Prot
Match: EF2_MESAU (Elongation factor 2 OS=Mesocricetus auratus GN=EEF2 PE=2 SV=3)

HSP 1 Score: 274.633 bits (701), Expect = 3.106e-73
Identity = 138/219 (63.01%), Postives = 169/219 (77.17%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCK 661
            + MG+  E +EDVPCGN V +VG+DQF+ K  T+T  +   AH +R MKFSVSPVVRVAV+ K  +DLPKLVEGLKRLAKSDPMV C IEESGEHI+AGAGELHLEICLKDL++D      I KSDPVVS+RETV E+S    +SKSPNKHNRLYM+ARP  +GLAE ID G +  R + KAR++ L+E++ WD   A+KIWCFGP+ TGPN++ D+ K
Sbjct:  452 LMMGRYVEPIEDVPCGNIVGLVGVDQFLVKTGTITTFEH--AHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIIEESGEHIIAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKARARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITK 667          
BLAST of CF832025 vs. ExPASy Swiss-Prot
Match: EF2_CRIGR (Elongation factor 2 OS=Cricetulus griseus GN=EEF2 PE=3 SV=3)

HSP 1 Score: 274.633 bits (701), Expect = 3.106e-73
Identity = 138/219 (63.01%), Postives = 169/219 (77.17%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCK 661
            + MG+  E +EDVPCGN V +VG+DQF+ K  T+T  +   AH +R MKFSVSPVVRVAV+ K  +DLPKLVEGLKRLAKSDPMV C IEESGEHI+AGAGELHLEICLKDL++D      I KSDPVVS+RETV E+S    +SKSPNKHNRLYM+ARP  +GLAE ID G +  R + KAR++ L+E++ WD   A+KIWCFGP+ TGPN++ D+ K
Sbjct:  452 LMMGRYVEPIEDVPCGNIVGLVGVDQFLVKTGTITTFEH--AHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIIEESGEHIIAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKARARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITK 667          
BLAST of CF832025 vs. ExPASy Swiss-Prot
Match: EF2_CRYPV (Elongation factor 2 OS=Cryptosporidium parvum PE=3 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 9.037e-73
Identity = 129/217 (59.45%), Postives = 174/217 (80.18%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDM 655
            + MG+  E + DVP GNTV +VG+DQ++ K+ T+T  +   AH I +MK+SVSPVVRVAV+ K   +LPKLVEGLK+L+KSDP+VVC+ EE+GEHI+AG GELH+EICL+DLQ ++    EI+ SDP+VS+RETV+  S +T +SKSPNKHNRLYM A PL +GL + I++G++ PRDDPK RS +L +++G+DK+ A KIWCFGPETTGPN++VD+
Sbjct:  426 LMMGRYVEQIPDVPAGNTVGLVGIDQYLLKSGTITTSET--AHNIASMKYSVSPVVRVAVRPKDNKELPKLVEGLKKLSKSDPLVVCSKEETGEHIIAGCGELHVEICLQDLQQEY-AQIEIVASDPIVSYRETVVNLSNQTCLSKSPNKHNRLYMTAEPLPDGLTDDIEEGKVSPRDDPKERSNLLHDKYGFDKNAAMKIWCFGPETTGPNIMVDV 639          
BLAST of CF832025 vs. ExPASy Swiss-Prot
Match: EF2_CHICK (Elongation factor 2 OS=Gallus gallus GN=EEF2 PE=1 SV=3)

HSP 1 Score: 273.092 bits (697), Expect = 9.037e-73
Identity = 137/219 (62.56%), Postives = 168/219 (76.71%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCK 661
            + MG+  E +EDVPCGN V +VG+DQF+ K  T+T  +   AH +R MKFSVSPVVRVAV+ K  +DLPKLVEGLKRLAKSDPMV C IEESGEHI+AGAGELHLEICLKDL++D      I KSDPVVS+RETV E+S    +SKSPNKHNRLYM+ARP  +GLAE ID G +  R + K R++ L+E++ WD   A+KIWCFGP+ TGPN++ D+ K
Sbjct:  452 LMMGRYVEPIEDVPCGNIVGLVGVDQFLVKTGTITTFEH--AHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIIEESGEHIIAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVSEESNVMCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKQRARYLAEKYEWDVTEARKIWCFGPDGTGPNILTDITK 667          
BLAST of CF832025 vs. ExPASy Swiss-Prot
Match: EF2_PONAB (Elongation factor 2 OS=Pongo abelii GN=EEF2 PE=2 SV=3)

HSP 1 Score: 272.707 bits (696), Expect = 1.180e-72
Identity = 137/219 (62.56%), Postives = 168/219 (76.71%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCK 661
            + MG+  E +EDVPCGN V +VG+DQF+ K  T+T  +   AH +R MKFSVSPVVRVAV+ K  +DLPKLVEGLKRLAKSDPMV C IEESGEHI+AGAGELHLEICLKDL++D      I KSDPVVS+RETV E+S    +SKSPNKHNRLYM+ARP  +GLAE ID G +  R + K R++ L+E++ WD   A+KIWCFGP+ TGPN++ D+ K
Sbjct:  452 LMMGRYVEPIEDVPCGNIVGLVGVDQFLVKTGTITTFEH--AHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIIEESGEHIIAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKQRARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITK 667          
BLAST of CF832025 vs. ExPASy Swiss-Prot
Match: EF2_HUMAN (Elongation factor 2 OS=Homo sapiens GN=EEF2 PE=1 SV=4)

HSP 1 Score: 272.707 bits (696), Expect = 1.180e-72
Identity = 137/219 (62.56%), Postives = 168/219 (76.71%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCK 661
            + MG+  E +EDVPCGN V +VG+DQF+ K  T+T  +   AH +R MKFSVSPVVRVAV+ K  +DLPKLVEGLKRLAKSDPMV C IEESGEHI+AGAGELHLEICLKDL++D      I KSDPVVS+RETV E+S    +SKSPNKHNRLYM+ARP  +GLAE ID G +  R + K R++ L+E++ WD   A+KIWCFGP+ TGPN++ D+ K
Sbjct:  452 LMMGRYVEPIEDVPCGNIVGLVGVDQFLVKTGTITTFEH--AHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIIEESGEHIIAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKQRARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITK 667          
The following BLAST results are available for this feature:
BLAST of CF832025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 424
Match NameE-valueIdentityDescription
EF2_BETVU6.387e-11994.06Elongation factor 2 OS=Beta vulgaris PE=2 SV=1[more]
EF2_CHLKE6.006e-10183.41Elongation factor 2 OS=Chlorella kessleri PE=2 SV=... [more]
EF2_RAT3.106e-7363.01Elongation factor 2 OS=Rattus norvegicus GN=Eef2 P... [more]
EF2_MOUSE3.106e-7363.01Elongation factor 2 OS=Mus musculus GN=Eef2 PE=1 S... [more]
EF2_MESAU3.106e-7363.01Elongation factor 2 OS=Mesocricetus auratus GN=EEF... [more]
EF2_CRIGR3.106e-7363.01Elongation factor 2 OS=Cricetulus griseus GN=EEF2 ... [more]
EF2_CRYPV9.037e-7359.45Elongation factor 2 OS=Cryptosporidium parvum PE=3... [more]
EF2_CHICK9.037e-7362.56Elongation factor 2 OS=Gallus gallus GN=EEF2 PE=1 ... [more]
EF2_PONAB1.180e-7262.56Elongation factor 2 OS=Pongo abelii GN=EEF2 PE=2 S... [more]
EF2_HUMAN1.180e-7262.56Elongation factor 2 OS=Homo sapiens GN=EEF2 PE=1 S... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01D01_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832025 ID=CF832025; Name=CF832025; organism=Citrus sinensis; type=EST; length=662bp
ACGTATTTGGATGGGAAAGAAGCAGGAAACCGTTGAGGATGTGCCTTGTG
GTAACACTGTGGCTATGGTTGGTCTCGATCAATTCATCACTAAAAATGCT
ACCTTGACTAATGAGAAGGAAGTTGATGCCCATCCCATCCGTGCTATGAA
GTTCTCTGTCTCACCTGTTGTTCGTGTGGCTGTCCAGTGCAAAGTCGCTT
CTGATCTCCCTAAGCTTGTTGAAGGTCTTAAGCGTTTGGCCAAGTCAGAT
CCTATGGTTGTCTGTACAATTGAGGAGTCTGGCGAGCACATTGTTGCTGG
TGCGGGAGAACTTCACCTTGAGATCTGTTTGAAGGATCTGCAGGACGATT
TCATGGGAGGTGCTGAAATTATTAAATCTGATCCTGTTGTGTCCTTCCGT
GAAACTGTCCTTGAGAAGTCTTGCCGCACTGTGATGAGTAAGTCTCCCAA
CAAGCATAATCGTCTCTACATGGAAGCCCGACCTCTGGAAGAAGGTCTTG
CTGAGGCCATAGATGATGGCCGCATTGGTCCAAGGGATGATCCCAAGGCT
CGATCTAAGATCTTGTCTGAGGAGTTCGGCTGGGACAAGGATCTTGCGAA
GAAGATTTGGTGTTTTGGTCCTGAGACCACTGGCCCTAACATGGTCGTTG
ATATGTGTAAGG
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