CF832071

Overview
NameCF832071
Unique NameCF832071
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length788
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10238 contig Csv1_Contig10238:1112..1899. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832071 vs. ExPASy Swiss-Prot
Match: KSG7_ARATH (Shaggy-related protein kinase eta OS=Arabidopsis thaliana GN=ASK7 PE=1 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 1.738e-34
Identity = 66/75 (88.00%), Postives = 73/75 (97.33%), Query Frame = -2
Query:  563 QYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKRQLGLNFLHPAGT 787
            QYSPSLRCTALEACAHPFFDELREPNARLPNGRP PPLFNFKQE++G+SPELVNKLIPDH+KRQLGL+FL+ +GT
Sbjct:  306 QYSPSLRCTALEACAHPFFDELREPNARLPNGRPFPPLFNFKQEVAGSSPELVNKLIPDHIKRQLGLSFLNQSGT 380          
BLAST of CF832071 vs. ExPASy Swiss-Prot
Match: KSG6_ARATH (Shaggy-related protein kinase zeta OS=Arabidopsis thaliana GN=ASK6 PE=1 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 5.233e-31
Identity = 62/74 (83.78%), Postives = 68/74 (91.89%), Query Frame = -2
Query:  566 QYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKRQLGLNFLHPAG 787
            QYSPSLRCTALEACAHPFF+ELREPNARLPNGRPLPPLFNFKQELSGASPEL+N+LIP+HV+RQ+   F   AG
Sbjct:  338 QYSPSLRCTALEACAHPFFNELREPNARLPNGRPLPPLFNFKQELSGASPELINRLIPEHVRRQMNGGFPFQAG 411          
BLAST of CF832071 vs. ExPASy Swiss-Prot
Match: KSG9_ARATH (Shaggy-related protein kinase iota OS=Arabidopsis thaliana GN=ASK9 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.091e-28
Identity = 57/65 (87.69%), Postives = 63/65 (96.92%), Query Frame = -2
Query:  593 QYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKRQL 787
            QYSPSLRCTALEACAHPFF+ELREPNARLPNGRPLPPLFNFKQEL GAS EL+N+LIP+HV+RQ+
Sbjct:  336 QYSPSLRCTALEACAHPFFNELREPNARLPNGRPLPPLFNFKQELGGASMELINRLIPEHVRRQM 400          
BLAST of CF832071 vs. ExPASy Swiss-Prot
Match: KSG4_ARATH (Shaggy-related protein kinase delta OS=Arabidopsis thaliana GN=ASK4 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 9.559e-25
Identity = 52/72 (72.22%), Postives = 61/72 (84.72%), Query Frame = -2
Query:  575 QYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNFK-QELSGASPELVNKLIPDHVKRQLGLNFLH 787
            QYSP+LRCTA+EAC HPFFDELR+PNARLPNGRPLPPLFNFK QELSG  PE V++L+P+H ++Q     LH
Sbjct:  348 QYSPNLRCTAVEACIHPFFDELRDPNARLPNGRPLPPLFNFKPQELSGIPPETVDRLVPEHARKQNHFMALH 419          
BLAST of CF832071 vs. ExPASy Swiss-Prot
Match: KSG10_ARATH (Shaggy-related protein kinase kappa OS=Arabidopsis thaliana GN=ASK10 PE=1 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.248e-24
Identity = 52/72 (72.22%), Postives = 60/72 (83.33%), Query Frame = -2
Query:  575 QYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNFK-QELSGASPELVNKLIPDHVKRQLGLNFLH 787
            QYSP+LRCTALEAC HP FDELR+PN RLPNGRPLPPLFNFK QELSG  PE+VN+L+P+H ++Q     LH
Sbjct:  349 QYSPNLRCTALEACIHPLFDELRDPNTRLPNGRPLPPLFNFKPQELSGIPPEIVNRLVPEHARKQNLFMALH 420          
BLAST of CF832071 vs. ExPASy Swiss-Prot
Match: KSG5_ARATH (Shaggy-related protein kinase epsilon OS=Arabidopsis thaliana GN=ASK5 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.292e-21
Identity = 49/65 (75.38%), Postives = 56/65 (86.15%), Query Frame = -2
Query:  596 QYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNFK-QELSGASPELVNKLIPDHVKRQ 787
            QYSP+LR TA+EA  HPFFDELR+PN RLPNGR LPPLFNFK QEL GAS EL++KLIPDH ++Q
Sbjct:  340 QYSPNLRSTAMEAIVHPFFDELRDPNTRLPNGRALPPLFNFKPQELKGASLELLSKLIPDHARKQ 404          
BLAST of CF832071 vs. ExPASy Swiss-Prot
Match: KSG2_ARATH (Shaggy-related protein kinase beta OS=Arabidopsis thaliana GN=ASK2 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.866e-20
Identity = 46/64 (71.88%), Postives = 56/64 (87.50%), Query Frame = -2
Query:  599 QYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNF-KQELSGASPELVNKLIPDHVKR 787
            QYSP+LRCTALEACAHPFFD+LR+P A LPNGR LPPLF+F  QEL+GAS EL ++LIP+H ++
Sbjct:  368 QYSPNLRCTALEACAHPFFDDLRDPRASLPNGRALPPLFDFTAQELAGASVELRHRLIPEHARK 431          
BLAST of CF832071 vs. ExPASy Swiss-Prot
Match: KSG8_ARATH (Shaggy-related protein kinase theta OS=Arabidopsis thaliana GN=ASK8 PE=2 SV=3)

HSP 1 Score: 99.3673 bits (246), Expect = 2.436e-20
Identity = 47/61 (77.05%), Postives = 52/61 (85.25%), Query Frame = -2
Query:  608 QYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNF-KQELSGASPELVNKLIPDH 787
            QYSP+LRCTALEACAHPFFD+LR+PN  LPNGR LPPLFNF  QEL+GAS EL  +LIP H
Sbjct:  404 QYSPNLRCTALEACAHPFFDDLRDPNVSLPNGRALPPLFNFTAQELAGASTELRQRLIPAH 464          
BLAST of CF832071 vs. ExPASy Swiss-Prot
Match: KSGT_BRANA (Shaggy-related protein kinase theta OS=Brassica napus PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 5.428e-20
Identity = 47/61 (77.05%), Postives = 51/61 (83.61%), Query Frame = -2
Query:  608 QYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNF-KQELSGASPELVNKLIPDH 787
            QYSP+LRCTALEACAHPFFD+LR PN  LPNGR LPPLFNF  QEL+GAS EL  +LIP H
Sbjct:  400 QYSPNLRCTALEACAHPFFDDLRAPNVSLPNGRALPPLFNFTAQELAGASTELRQRLIPAH 460          
BLAST of CF832071 vs. ExPASy Swiss-Prot
Match: KSG3_ARATH (Shaggy-related protein kinase gamma OS=Arabidopsis thaliana GN=ASK3 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.579e-19
Identity = 44/65 (67.69%), Postives = 53/65 (81.54%), Query Frame = -2
Query:  596 QYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNFK-QELSGASPELVNKLIPDHVKRQ 787
            QYSP+LRC AL++  HPFFDELR+PNARLPNGR LPPLFNFK  EL G   E+V KL+P+H ++Q
Sbjct:  339 QYSPNLRCAALDSLVHPFFDELRDPNARLPNGRFLPPLFNFKPHELKGVPVEMVAKLVPEHARKQ 403          
The following BLAST results are available for this feature:
BLAST of CF832071 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
KSG7_ARATH1.738e-3488.00Shaggy-related protein kinase eta OS=Arabidopsis t... [more]
KSG6_ARATH5.233e-3183.78Shaggy-related protein kinase zeta OS=Arabidopsis ... [more]
KSG9_ARATH1.091e-2887.69Shaggy-related protein kinase iota OS=Arabidopsis ... [more]
KSG4_ARATH9.559e-2572.22Shaggy-related protein kinase delta OS=Arabidopsis... [more]
KSG10_ARATH1.248e-2472.22Shaggy-related protein kinase kappa OS=Arabidopsis... [more]
KSG5_ARATH1.292e-2175.38Shaggy-related protein kinase epsilon OS=Arabidops... [more]
KSG2_ARATH1.866e-2071.88Shaggy-related protein kinase beta OS=Arabidopsis ... [more]
KSG8_ARATH2.436e-2077.05Shaggy-related protein kinase theta OS=Arabidopsis... [more]
KSGT_BRANA5.428e-2077.05Shaggy-related protein kinase theta OS=Brassica na... [more]
KSG3_ARATH1.579e-1967.69Shaggy-related protein kinase gamma OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01E07_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832071 ID=CF832071; Name=CF832071; organism=Citrus sinensis; type=EST; length=788bp
TTTTTTTTTTTTTTTTTCCAGAGGAGAATTGCAATAACATTACCTTTTAC
AAACAGCAAGTGACAACAATTGTCTGCAATTTGAAGTCAGTCACCACAGA
CCATCAAAATAGAGAAATTGAAAGACTTGCAAAGAGGGAAAAGAAAAACA
GGACCAAACCTGACAACATCATGCCCACCCCATCTTCTGGGCCATTCTCT
TTGGGGCTTTCTTCCTAGGTACAAATACATTTTTCCTCAGTTTTTCCTCT
ACTAACAGCAGTCTGATCAGTCCACCTTATCAACTTAACCTATCTTTACT
ATCAAACATGTACATAAACAAATGGGAACTTTAACAGAGGAGGGGGGGTG
GGACGAAGTGGGGAGGAGACACAGGAGGATGGAAAAGCAGAAAAAGAAGG
CACCAAGAAAAGCATAGCTGCCTGAGAATGTAGGCTTGCTGATCGAGCAA
CAACTGATGCTGATTAAGCCTCAATGCATGGCAGTTACGAACAAGGATAT
AATTCCCTTTGTGCTACACATCACCAAGTAGATTTCACTTCTATATTACT
TGTCTAGACCTATGTCCCGGCTGGATGCAAGAAATTCAGACCTAATTGCC
GTTTCACATGGTCTGGTATCAACTTATTAACAAGCTCTGGTGAAGCCCCC
GATAATTCCTGTTTAAAGTTGAAAAGAGGTGGCAGTGGGCGGCCATTTGG
TAGGCGAGCATTTGGCTCACGCAGTTCATCAAAGAAAGGATGTGCACATG
CTTCTAGCGCTGTACATCGGAGACTTGGTGAATACTGC
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