CF832147

Overview
NameCF832147
Unique NameCF832147
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length836
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10427 contig Csv1_Contig10427:1090..1922. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832147 vs. ExPASy Swiss-Prot
Match: ASPR_CUCPE (Aspartic proteinase OS=Cucurbita pepo PE=2 SV=1)

HSP 1 Score: 336.265 bits (861), Expect = 1.313e-91
Identity = 153/208 (73.56%), Postives = 184/208 (88.46%), Query Frame = 3
Query:    6 IITLVNHAIGATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA 629
            +IT++NHAIGA G+VSQ+CKAVV+QYG+ I+++LL++ +P+KICSQI LCTFDG+RGVSMGIESVV EN  ++S   HD MCS CEM VVWMQNQL+QNQT+ERI+NY+NELCDR+PSPMG+SAVDC +LSS+P VSFTIGGKIFDL P++YILKVGEG  AQCISGF+A D+ PPRGPLWILGDVFMG YHTVFD+  +RVG AEAA
Sbjct:  306 VITMINHAIGAKGVVSQQCKAVVAQYGQTIMDLLLSEADPKKICSQINLCTFDGTRGVSMGIESVVDENAGKSSDSLHDGMCSVCEMTVVWMQNQLRQNQTKERIINYINELCDRMPSPMGQSAVDCGQLSSMPTVSFTIGGKIFDLAPEEYILKVGEGPVAQCISGFTAFDIPPPRGPLWILGDVFMGRYHTVFDFGKLRVGSAEAA 513          
BLAST of CF832147 vs. ExPASy Swiss-Prot
Match: ASPR_HORVU (Phytepsin OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 313.538 bits (802), Expect = 9.115e-85
Identity = 145/208 (69.71%), Postives = 177/208 (85.10%), Query Frame = 3
Query:    6 IITLVNHAIGATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA 629
            IIT +N  IGA G+VSQECK +VSQYG++I+++LLA+ +P+KICSQ+GLCTFDG+RGVS GI SVV +   +++G   D MCS CEMAVVWMQNQL QN+TQ+ IL+YVN+LC+RLPSPMGESAVDC  L S+P + FTIGGK F L P++YILKVGEG AAQCISGF+A+D+ PPRGPLWILGDVFMGPYHTVFDY  +R+GFA+AA
Sbjct:  301 IITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKICSQVGLCTFDGTRGVSAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVDCGSLGSMPDIEFTIGGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLRIGFAKAA 508          
BLAST of CF832147 vs. ExPASy Swiss-Prot
Match: ASPR1_ORYSJ (Aspartic proteinase oryzasin-1 OS=Oryza sativa subsp. japonica GN=Os05g0567100 PE=2 SV=2)

HSP 1 Score: 310.071 bits (793), Expect = 1.008e-83
Identity = 144/208 (69.23%), Postives = 175/208 (84.13%), Query Frame = 3
Query:    6 IITLVNHAIGATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA 629
            IIT +N  IGATG+VSQECK VVSQYG++I+++LLA+ +P KICSQ+GLCTFDG  GVS GI+SVV +    ++G     MC+ CEMAVVWMQNQL QN+TQ+ ILNY+N+LCD+LPSPMGES+VDC  L+S+P +SFTIGGK F L P++YILKVGEG AAQCISGF+A+D+ PPRGPLWILGDVFMG YHTVFDY  MRVGFA++A
Sbjct:  302 IITEINEKIGATGVVSQECKTVVSQYGQQILDLLLAETQPSKICSQVGLCTFDGKHGVSAGIKSVVDDEAGESNGLQSGPMCNACEMAVVWMQNQLAQNKTQDLILNYINQLCDKLPSPMGESSVDCGSLASMPEISFTIGGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGAYHTVFDYGKMRVGFAKSA 509          
BLAST of CF832147 vs. ExPASy Swiss-Prot
Match: CYPR1_CYNCA (Cyprosin (Fragment) OS=Cynara cardunculus GN=CYPRO1 PE=1 SV=2)

HSP 1 Score: 294.664 bits (753), Expect = 4.381e-79
Identity = 136/209 (65.07%), Postives = 175/209 (83.73%), Query Frame = 3
Query:    3 TIITLVNHAIGATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA 629
            TI+T +N AIGA G++SQ+CK++V QYG+ +I MLL++++P+KICSQ+ LC+FDGS   SM IESVV ++  ++SG      C  C   VVWMQNQ++QN+T+E I+NYV++LC+RLPSPMGESAVDCS LSS+P ++FT+GGK F+L+P+QY+LKVGEG  AQCISGF+A+DVAPP GPLWILGDVFMG YHTVFDY N+RVGFAEAA
Sbjct:  267 TIVTQINQAIGAAGVMSQQCKSLVDQYGKSMIEMLLSEEQPEKICSQMKLCSFDGSHDTSMIIESVVDKSKGKSSG--LPMRCVPCARWVVWMQNQIRQNETEENIINYVDKLCERLPSPMGESAVDCSSLSSMPNIAFTVGGKTFNLSPEQYVLKVGEGATAQCISGFTAMDVAPPHGPLWILGDVFMGQYHTVFDYGNLRVGFAEAA 473          
BLAST of CF832147 vs. ExPASy Swiss-Prot
Match: ASPRX_ORYSJ (Aspartic proteinase OS=Oryza sativa subsp. japonica GN=RAP PE=2 SV=2)

HSP 1 Score: 277.33 bits (708), Expect = 7.239e-74
Identity = 129/208 (62.02%), Postives = 163/208 (78.37%), Query Frame = 3
Query:    6 IITLVNHAIGATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA 629
            I+  VNHAIGA GI+S ECK VVS+YGE I+N+L+A+ +PQK+CSQ+GLC FDG R VS GIESVV + N  +     DAMCS CEMAVVW++NQL++N+T+E ILNY N+LC+RLPSP GES V C ++S +P ++FTI  K F LTP+QYI+K+ +G    CISGF A D+ PPRGPLWILGDVFMG YHTVFD+   R+GFA++A
Sbjct:  294 IVAQVNHAIGAEGIISTECKEVVSEYGEMILNLLIAQTDPQKVCSQVGLCMFDGKRSVSNGIESVVDKENLGS-----DAMCSVCEMAVVWIENQLRENKTKELILNYANQLCERLPSPNGESTVSCHQISKMPNLAFTIANKTFILTPEQYIVKLEQGGQTVCISGFMAFDIPPPRGPLWILGDVFMGAYHTVFDFGKDRIGFAKSA 496          
BLAST of CF832147 vs. ExPASy Swiss-Prot
Match: CATD_MOUSE (Cathepsin D OS=Mus musculus GN=Ctsd PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.808e-24
Identity = 51/92 (55.43%), Postives = 65/92 (70.65%), Query Frame = 3
Query:  351 LPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEA 626
            +P   GE  + C ++SSLP V   +GGK ++L PD+YILKV +G    C+SGF  +D+ PP GPLWILGDVF+G Y+TVFD  N RVGFA A
Sbjct:  316 VPLIQGEYMIPCEKVSSLPTVYLKLGGKNYELHPDKYILKVSQGGKTICLSGFMGMDIPPPSGPLWILGDVFIGSYYTVFDRDNNRVGFANA 407          
BLAST of CF832147 vs. ExPASy Swiss-Prot
Match: CATD_CHIHA (Cathepsin D OS=Chionodraco hamatus GN=ctsd PE=1 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 2.361e-24
Identity = 51/91 (56.04%), Postives = 65/91 (71.43%), Query Frame = 3
Query:  354 PSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEA 626
            P   GE  V+C  + SLP++SFT+GG+++ LT +QYILKV +     C+SGF  LD+  P GPLWILGDVFMG Y+TVFD    RVGFA+A
Sbjct:  305 PLIQGEYMVNCDTVPSLPVISFTVGGQVYTLTGEQYILKVTQAGKTMCLSGFMGLDIPAPAGPLWILGDVFMGQYYTVFDRDANRVGFAKA 395          
BLAST of CF832147 vs. ExPASy Swiss-Prot
Match: CATD_RAT (Cathepsin D OS=Rattus norvegicus GN=Ctsd PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 8.973e-24
Identity = 49/93 (52.69%), Postives = 68/93 (73.12%), Query Frame = 3
Query:  351 LPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA 629
            +P   GE  + C ++SSLPI++F +GG+ ++L P++YILKV +     C+SGF  +D+ PP GPLWILGDVF+G Y+TVFD    RVGFA+AA
Sbjct:  313 VPLIQGEYMIPCEKVSSLPIITFKLGGQNYELHPEKYILKVSQAGKTICLSGFMGMDIPPPSGPLWILGDVFIGCYYTVFDREYNRVGFAKAA 405          
BLAST of CF832147 vs. ExPASy Swiss-Prot
Match: CATD_HUMAN (Cathepsin D OS=Homo sapiens GN=CTSD PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.999e-23
Identity = 48/93 (51.61%), Postives = 65/93 (69.89%), Query Frame = 3
Query:  351 LPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA 629
            +P   GE  + C ++S+LP ++  +GGK + L+P+ Y LKV +     C+SGF  +D+ PP GPLWILGDVF+G Y+TVFD  N RVGFAEAA
Sbjct:  318 VPLIQGEYMIPCEKVSTLPAITLKLGGKGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWILGDVFIGRYYTVFDRDNNRVGFAEAA 410          
BLAST of CF832147 vs. ExPASy Swiss-Prot
Match: CATD_CHICK (Cathepsin D OS=Gallus gallus GN=CTSD PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.611e-23
Identity = 49/90 (54.44%), Postives = 63/90 (70.00%), Query Frame = 3
Query:  354 PSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAE 623
            P   G+  + C ++SSLP+V+  +GGK + LT +QY+ KV       C+SGFS LDV PP GPLWILGDVF+GPY+TVFD  N  VGFA+
Sbjct:  307 PLIKGQYVISCDKISSLPVVTLMLGGKPYQLTGEQYVFKVSAQGETICLSGFSGLDVPPPGGPLWILGDVFIGPYYTVFDRDNDSVGFAK 396          
The following BLAST results are available for this feature:
BLAST of CF832147 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
ASPR_CUCPE1.313e-9173.56Aspartic proteinase OS=Cucurbita pepo PE=2 SV=1[more]
ASPR_HORVU9.115e-8569.71Phytepsin OS=Hordeum vulgare PE=1 SV=1[more]
ASPR1_ORYSJ1.008e-8369.23Aspartic proteinase oryzasin-1 OS=Oryza sativa sub... [more]
CYPR1_CYNCA4.381e-7965.07Cyprosin (Fragment) OS=Cynara cardunculus GN=CYPRO... [more]
ASPRX_ORYSJ7.239e-7462.02Aspartic proteinase OS=Oryza sativa subsp. japonic... [more]
CATD_MOUSE1.808e-2455.43Cathepsin D OS=Mus musculus GN=Ctsd PE=1 SV=1[more]
CATD_CHIHA2.361e-2456.04Cathepsin D OS=Chionodraco hamatus GN=ctsd PE=1 SV... [more]
CATD_RAT8.973e-2452.69Cathepsin D OS=Rattus norvegicus GN=Ctsd PE=1 SV=1[more]
CATD_HUMAN1.999e-2351.61Cathepsin D OS=Homo sapiens GN=CTSD PE=1 SV=1[more]
CATD_CHICK2.611e-2354.44Cathepsin D OS=Gallus gallus GN=CTSD PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01G07_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832147 ID=CF832147; Name=CF832147; organism=Citrus sinensis; type=EST; length=836bp
CGACCATCATAACTCTAGTCAACCATGCCATTGGAGCCACTGGAATTGTC
AGTCAAGAATGCAAGGCTGTAGTTTCACAATATGGAGAGGAGATCATCAA
TATGCTTTTAGCTAAGGATGAACCTCAAAAAATTTGCTCACAGATTGGTT
TGTGCACATTTGATGGGTCTCGAGGTGTGAGTATGGGCATTGAGAGTGTC
GTTCCTGAGAATAATCATAGAGCATCTGGTGGTTTCCATGATGCAATGTG
CTCTACTTGTGAGATGGCAGTTGTGTGGATGCAGAACCAGCTCAAGCAGA
ACCAAACACAAGAGCGCATTCTTAACTATGTCAATGAGCTCTGTGATCGG
TTGCCTAGTCCTATGGGAGAATCGGCTGTTGACTGTAGCAGATTGTCTTC
CTTGCCTATTGTTTCCTTTACGATTGGTGGAAAGATATTTGACCTTACTC
CTGATCAGTACATCCTCAAAGTGGGCGAGGGAGATGCAGCTCAATGTATA
AGTGGATTCTCAGCTCTAGATGTTGCCCCACCACGTGGACCTCTCTGGAT
CTTGGGGGATGTTTTTATGGGTCCCTACCACACAGTCTTTGACTACAGCA
ACATGAGAGTGGGATTTGCTGAAGCCGCGTAAATAAGTTTGTTTTAAATT
ATGCTCAGTGAACCGTACCTCGTGGAATTTCAGTTGTTTCTTTAAGATGT
TGAAACTAAACCTTAAATAACTGTTCTATGTAAATGCTCTGATGTATGAC
AGCTGTTGAGAAGCCCAAGACGTTGGACTTTGTTTATAAATCCGTGCCTG
GACTCTTATTGGGGTTGTGCAAAAAAAAAAAAAAAA
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