CF832156

Overview
NameCF832156
Unique NameCF832156
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length747
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9802 contig Csv1_Contig9802:422..1141. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832156 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.866e-59
Identity = 104/177 (58.76%), Postives = 127/177 (71.75%), Query Frame = -3
Query:  218 APGGEYAWGYCYIRQVSPASSDXXXXXXXXPLPG-QYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 745
            AP G YAWGYCY R+++P SS           PG QY+GRGP+QL+WN NY +CG A+GVDLLNNPDLL++DP +SFKSA WFWMT Q PKPSCH VII  W PS++D  AGR+PGYG+ TNIINGG+ECG   N  V +RIGF+  +C   G+  G+NLDC NQ P+G  +   SM
Sbjct:  148 APDGPYAWGYCYNRELNPPSSYCASDPNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTPQSPKPSCHNVIIGAWSPSSSDRAAGRVPGYGVITNIINGGLECGKGWNAQVEDRIGFYKRYCDILGVSYGNNLDCYNQSPFGNGVSVDSM 324          
BLAST of CF832156 vs. ExPASy Swiss-Prot
Match: CHI2_PEA (Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=2)

HSP 1 Score: 228.794 bits (582), Expect = 2.438e-59
Identity = 103/176 (58.52%), Postives = 129/176 (73.30%), Query Frame = -3
Query:  218 APGGEYAWGYCYIRQVSPASSDXXXXXXXXPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 745
            AP G YAWGYC++R+ +P++              QYYGRGPIQ++WN NY +CG A+GVDLLNNPDL+ATDPV+SFK+A+WFWMT Q PKPSCH+VI   W PS+ D  AGRLPGYG  TNIINGG+ECG   +  V++RIGF+  +C  FGI  GDNLDC +QRP+G +L   S+
Sbjct:  141 APDGPYAWGYCFLREQNPSTYCQASSEFPCASGKQYYGRGPIQISWNYNYGQCGRAIGVDLLNNPDLVATDPVISFKTALWFWMTPQSPKPSCHDVITGGWTPSSADRAAGRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFYKRYCDIFGIGYGDNLDCYSQRPFGSSLPLSSI 316          
BLAST of CF832156 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2)

HSP 1 Score: 225.328 bits (573), Expect = 2.695e-58
Identity = 103/177 (58.19%), Postives = 125/177 (70.62%), Query Frame = -3
Query:  218 APGGEYAWGYCYIRQVSPASSDXXXXXXXXPLPG-QYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 745
            AP G YAWGYCY R+++P SS           PG QY+GRGP+QL+WN NY +CG A+GVDLLNNPDLL++DP +SFKSA WFWMT Q PKPSCH VII  W PS++D  AGR  GYG+ TNIINGG+ECG   N  V +RIGF+  +C   G+  G+NLDC NQ P+G  +   SM
Sbjct:  126 APDGPYAWGYCYNRELNPPSSYCASDPNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTPQSPKPSCHNVIIGAWSPSSSDRAAGRATGYGVITNIINGGLECGKGWNAQVEDRIGFYKRYCDILGVSYGNNLDCYNQSPFGNGVSVDSM 302          
BLAST of CF832156 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 3.520e-58
Identity = 103/176 (58.52%), Postives = 121/176 (68.75%), Query Frame = -3
Query:  218 APGGEYAWGYCYIRQVSPASSDXXXXXXXXPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 745
            AP G Y WGYCY R+++PA               QY+GRGP+QLTWN NY +CG A+GVDLLNNPDLLATDP +SFKSA WFWMT Q PKPSCH+VII  W PS +D  AGR+PG+GL TNIINGG+ECG   N  V +RIGF+  +C   G+  G+NLDC NQR Y       SM
Sbjct:  146 APDGPYTWGYCYNRELNPADYCQWDPNYPCAPGKQYFGRGPMQLTWNYNYGQCGRAIGVDLLNNPDLLATDPTISFKSAFWFWMTPQSPKPSCHDVIIGAWSPSGSDQAAGRVPGFGLITNIINGGLECGQGWNAKVEDRIGFYKRYCDTLGVGYGNNLDCYNQRSYNNGPSVDSM 321          
BLAST of CF832156 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 6.004e-58
Identity = 99/169 (58.58%), Postives = 126/169 (74.56%), Query Frame = -3
Query:  242 APGGEYAWGYCYIRQVSPASSDXXXXXXXXPLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYG 745
            AP G YAWGYC++++ +P+S+           PG+ YYGRGP+QL+WN NY  CGEAL V+LL NPDL+ATD VLSFK+A+WFWMT Q PKPSCH+V+   W+PSA D  AGRLPGYG+ TN++NGG+ECG   N  V +R+GFF  +CG  G+  G+NLDC NQRP+G
Sbjct:   75 APDGPYAWGYCFLKERNPSSNYCAPSPRYPCAPGKSYYGRGPLQLSWNYNYGPCGEALRVNLLGNPDLVATDRVLSFKTALWFWMTPQAPKPSCHDVLTGRWQPSAADTAAGRLPGYGVLTNLLNGGLECGKGPNPQVADRLGFFRRYCGLLGVGTGNNLDCYNQRPFG 243          
BLAST of CF832156 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2)

HSP 1 Score: 224.172 bits (570), Expect = 6.004e-58
Identity = 101/177 (57.06%), Postives = 126/177 (71.19%), Query Frame = -3
Query:  218 APGGEYAWGYCYIRQVSPASSDXXXXXXXXPLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 745
            AP G YAWGYC++R+                 PG+ Y+GRGPIQ++ N NY  CG A+GVDLLNNPDL+ATDPV+SFKSA+WFWMT Q PKPSCH+VII  W+PSA D  A RLPG+G+ TNIINGG+ECG   +  V++RIGF+  +C   G+ PGDNLDC NQR +G  L+  +M
Sbjct:  153 APDGPYAWGYCWLREQGSPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSALWFWMTPQSPKPSCHDVIIGRWQPSAGDRAANRLPGFGVITNIINGGLECGRGTDSRVQDRIGFYRRYCSILGVSPGDNLDCGNQRSFGNGLLVDTM 329          
BLAST of CF832156 vs. ExPASy Swiss-Prot
Match: CHIC_SOLLC (Basic 30 kDa endochitinase OS=Solanum lycopersicum GN=CHI9 PE=1 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.281e-57
Identity = 99/177 (55.93%), Postives = 125/177 (70.62%), Query Frame = -3
Query:  218 APGGEYAWGYCYIRQVSPASSDXXXXXXXXPLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 745
            AP G YAWGYC++R+                 PG+ Y+GRGPIQ++ N NY  CG A+GVDLLNNPDL+ATDPV+SFKSAIWFWMT Q PKPSCH+VI   W+PS  D  A R+PG+G+ TNIINGG+ECG+  +  V++RIGF+  +CG  G+ PG+NLDC NQR +G  L+   M
Sbjct:  146 APDGPYAWGYCFLREQGSPGDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGENLDCGNQRSFGNGLLVDIM 322          
BLAST of CF832156 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.281e-57
Identity = 100/177 (56.50%), Postives = 126/177 (71.19%), Query Frame = -3
Query:  218 APGGEYAWGYCYIRQVSPASSDXXXXXXXXPLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 745
            AP G YAWGYC++R+                 PG+ Y+GRGPIQ++ N NY  CG A+GVDLLNNPDL+ATDPV+SFKSA+WFWMT Q PKPSCH+VII  W+PS+ D  A RLPG+G+ TNIINGG+ECG   +  V++RIGF+  +C   G+ PGDNLDC NQR +G  L+  +M
Sbjct:  148 APDGPYAWGYCWLREQGSPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSALWFWMTPQSPKPSCHDVIIGRWQPSSADRAANRLPGFGVITNIINGGLECGRGTDSRVQDRIGFYRRYCSILGVSPGDNLDCGNQRSFGNGLLVDTM 324          
BLAST of CF832156 vs. ExPASy Swiss-Prot
Match: CHI1_SOLTU (Endochitinase 1 (Fragment) OS=Solanum tuberosum GN=CHTB1 PE=2 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 3.892e-57
Identity = 99/177 (55.93%), Postives = 125/177 (70.62%), Query Frame = -3
Query:  218 APGGEYAWGYCYIRQVSPASSDXXXXXXXXPLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 745
            AP G YAWGYC++R+                 PG+ Y+GRGPIQ++ N NY  CG A+GVDLLNNPDL+ATD V+SFKSAIWFWMT Q PKPSCH+VI   W+PS  D  A R+PG+G+ TNIINGG+ECG+  +  V++RIGF+  +CG  G+ PGDNLDC NQR +G  L+  +M
Sbjct:  142 APDGPYAWGYCFLREQGSPGDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGVDQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDCGNQRSFGNGLLVDTM 318          
BLAST of CF832156 vs. ExPASy Swiss-Prot
Match: CHI3_TOBAC (Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 5.083e-57
Identity = 100/177 (56.50%), Postives = 126/177 (71.19%), Query Frame = -3
Query:  218 APGGEYAWGYCYIRQVSPASSDXXXXXXXXPLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 745
            AP G YAWGYCY+R+     S           PGQ YYGRGPIQ+++N NY  CG A+G +LLNNPDL+AT+ V+SFKSAIWFWMTAQ PKPSCH+VI   W PSA D  A RLPGYG+ TNIINGG+ECG+  +  V++RIGF+  +C   G+ PGDN+DC NQ+ +   L+ ++M
Sbjct:  158 APDGRYAWGYCYLREQGNPPSYCVQSSQWPCAPGQKYYGRGPIQISYNYNYGPCGRAIGQNLLNNPDLVATNAVVSFKSAIWFWMTAQSPKPSCHDVITGRWTPSAADRAANRLPGYGVITNIINGGLECGHGSDARVQDRIGFYRRYCSILGVSPGDNIDCGNQKSFNSGLLLETM 334          
The following BLAST results are available for this feature:
BLAST of CF832156 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
CHI1_GOSHI1.866e-5958.76Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1[more]
CHI2_PEA2.438e-5958.52Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=... [more]
CHI2_GOSHI2.695e-5858.19Endochitinase 2 (Fragment) OS=Gossypium hirsutum P... [more]
CHI1_THECC3.520e-5858.52Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 S... [more]
CHIT_CARPA6.004e-5858.58Endochitinase OS=Carica papaya PE=1 SV=1[more]
CHI1_TOBAC6.004e-5857.06Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1... [more]
CHIC_SOLLC2.281e-5755.93Basic 30 kDa endochitinase OS=Solanum lycopersicum... [more]
CHI2_TOBAC2.281e-5756.50Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1... [more]
CHI1_SOLTU3.892e-5755.93Endochitinase 1 (Fragment) OS=Solanum tuberosum GN... [more]
CHI3_TOBAC5.083e-5756.50Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01G12_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832156 ID=CF832156; Name=CF832156; organism=Citrus sinensis; type=EST; length=747bp
TTTTTTTTTTGCAAATAATTGTCATGTTAAAATAATCAAACGATGAAAAA
TGGAGAAGACTCATTGATCCATGTTGGATCAGTCTTATTTAATTTACTTA
CAATAAGAGCGTAACAAACTAACAATTTAGTTGTCCACCTACAAGTGTGA
CATCTAAAGTTTTTATTAAGTAGCTTTTATTAAGCTTATTTTACTAAAAC
GTTGATCATGATGATCACATAGATTGTGCCATCAGATTAAGGCCATAAGG
CCGTTGGTTGGAGCAATCAAGATTGTCACCAGGCTGAATCCCAAACTTGC
CACAGAAAGTGGTAAAGAACCCAATACGGTTACGTACAGCGTCATTCCCA
ACGTAGCCACATTCAATTCCACCGTTGATTATATTTGTGGTTAGACCGTA
TCCCGGAAGCCGGCCGGCGTTTACGTCATTTGCTGATGGTTTCCATTCGT
CGATAATGACTTCGTGGCACGATGGCTTTGGTGGCTGTGCAGTCATCCAG
AACCAGATTGCTGACTTGAATGATAGTACTGGATCAGTGGCAAGTAGGTC
TGGATTGTTCAACAAGTCCACCCCCAAGGCTTCTCCGCACCTTAAGTAAT
TGCAATTCCAAGTGAGTTGAATTGGACCTCGGCCATAGTATTGCCCTGGC
AAGGGACATGGACAGTAAGGATAACAGTAGTCGGACGACGCAGGGCTAAC
TTGCCTAATATAGCAATATCCCCAAGCATATTCTCCACCAGGTGCAT
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