CF832180
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832180 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.173e-19 Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = -3 Query: 154 TSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 288 TSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL Sbjct: 540 TSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 584
BLAST of CF832180 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.173e-19 Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = -3 Query: 154 TSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 288 TSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL Sbjct: 540 TSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 584
BLAST of CF832180 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 4.615e-16 Identity = 38/45 (84.44%), Postives = 41/45 (91.11%), Query Frame = -3 Query: 154 TSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 288 TSGRVKWKG +VITS+TEAQA+TPG FIAG SWL STGFPFSLGL Sbjct: 539 TSGRVKWKGHKVITSSTEAQAYTPGRFIAGGSWLSSTGFPFSLGL 583
BLAST of CF832180 vs. ExPASy Swiss-Prot
Match: PME_DAUCA (Pectinesterase OS=Daucus carota PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.907e-15 Identity = 37/45 (82.22%), Postives = 40/45 (88.89%), Query Frame = -3 Query: 154 TSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 288 TSGRV WKGF+VITS+TEAQ FTPGSFIAG SWL +T FPFSLGL Sbjct: 275 TSGRVTWKGFKVITSSTEAQGFTPGSFIAGGSWLKATTFPFSLGL 319
BLAST of CF832180 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 1.389e-12 Identity = 31/45 (68.89%), Postives = 36/45 (80.00%), Query Frame = -3 Query: 154 TSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 288 T+ RVKW+GF+VIT+A EAQ +T G FI G WL STGFPFSLGL Sbjct: 548 TANRVKWRGFKVITAAAEAQKYTAGQFIGGGGWLSSTGFPFSLGL 592
BLAST of CF832180 vs. ExPASy Swiss-Prot
Match: PME2_ARATH (Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 1.815e-12 Identity = 32/45 (71.11%), Postives = 35/45 (77.78%), Query Frame = -3 Query: 154 TSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 288 T+ RVKWKG++VITS TEAQ FT G FI G WL STGFPFSL L Sbjct: 543 TANRVKWKGYKVITSDTEAQPFTAGQFIGGGGWLASTGFPFSLSL 587 The following BLAST results are available for this feature:
BLAST of CF832180 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF832180 ID=CF832180; Name=CF832180; organism=Citrus sinensis; type=EST; length=290bpback to top |