CF832184
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832184 vs. ExPASy Swiss-Prot
Match: SETD3_MOUSE (SET domain-containing protein 3 OS=Mus musculus GN=Setd3 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.198e-15 Identity = 75/263 (28.52%), Postives = 121/263 (46.01%), Query Frame = 3 Query: 84 PDLVKWVKKEGGFVHQAVKIFPQEDNETYGLGLVASQDIPKGSLLIALPDHIPLKFESDAGDGADSVLVDLASQ--VPEELWAMKLGLKLLQERARLGSFWWPYISNLPETYSVPIFFQGEDIKNLQYAPLLYQV-----NKRCRFLLDFDQEVRRALANVKPNDHPFGGQELNASSLGWAMSAVSSRAFRLHGKKLAAGTRNEVPVMLPLIDMCNHSFNPNAQIIQEEDDLQLLIKVVAETEIKQNDSLLPNYGCLSNDFFL 851 PDL+KW + G +V+ F + + G GL A++DI L + +P + + ES +SVL L SQ + + + + L LL ERA SFW PYI LP Y P++F+ E+++ LQ ++ V N ++ + AN P F ++ WA+S+V +R ++ + G+R + ++PL DMCNH+ EDD + VA + + D + YG SN F+ Sbjct: 80 PDLMKWASENGA----SVEGFEMVNFKEEGFGLRATRDIKAEELFLWVPRKLLMTVES----AKNSVLGPLYSQDRILQAMGNIALAFHLLCERASPNSFWQPYIQTLPSEYDTPLYFEEEEVRCLQSTQAIHDVFSQYKNTARQYAYFYKVIQTHPHANKLPLKESFTYEDYR-----WAVSSVMTRQNQIPTED---GSRVTL-ALIPLWDMCNHTNGLITTGYNLEDD---RCECVALQDFQAGDQIYIFYGTRSNAEFV 322
BLAST of CF832184 vs. ExPASy Swiss-Prot
Match: SETD3_HUMAN (SET domain-containing protein 3 OS=Homo sapiens GN=SETD3 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.947e-15 Identity = 73/263 (27.76%), Postives = 121/263 (46.01%), Query Frame = 3 Query: 84 PDLVKWVKKEGGFVHQAVKIFPQEDNETYGLGLVASQDIPKGSLLIALPDHIPLKFESDAGDGADSVLVDLASQ--VPEELWAMKLGLKLLQERARLGSFWWPYISNLPETYSVPIFFQGEDIKNLQYAPLLYQV-----NKRCRFLLDFDQEVRRALANVKPNDHPFGGQELNASSLGWAMSAVSSRAFRLHGKKLAAGTRNEVPVMLPLIDMCNHSFNPNAQIIQEEDDLQLLIKVVAETEIKQNDSLLPNYGCLSNDFFL 851 PDL+KW + G +V+ F + + G GL A++DI L + +P + + ES +SVL L SQ + + + + L LL ERA SFW PYI LP Y P++F+ ++++ LQ ++ V N ++ + AN P F ++ WA+S+V +R ++ + G+R + ++PL DMCNH+ EDD + VA + + + + YG SN F+ Sbjct: 80 PDLMKWASENGA----SVEGFEMVNFKEEGFGLRATRDIKAEELFLWVPRKLLMTVES----AKNSVLGPLYSQDRILQAMGNIALAFHLLCERASPNSFWQPYIQTLPSEYDTPLYFEEDEVRYLQSTQAIHDVFSQYKNTARQYAYFYKVIQTHPHANKLPLKDSFTYEDYR-----WAVSSVMTRQNQIPTED---GSRVTL-ALIPLWDMCNHTNGLITTGYNLEDD---RCECVALQDFRAGEQIYIFYGTRSNAEFV 322
BLAST of CF832184 vs. ExPASy Swiss-Prot
Match: SETD3_CHICK (SET domain-containing protein 3 OS=Gallus gallus GN=SETD3 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.263e-13 Identity = 70/263 (26.62%), Postives = 119/263 (45.25%), Query Frame = 3 Query: 84 PDLVKWVKKEGGFVHQAVKIFPQEDNETYGLGLVASQDIPKGSLLIALPDHIPLKFESDAGDGADSVLVDLASQ--VPEELWAMKLGLKLLQERARLGSFWWPYISNLPETYSVPIFFQGEDIKNLQYAPLLYQV-----NKRCRFLLDFDQEVRRALANVKPNDHPFGGQELNASSLGWAMSAVSSRAFRLHGKKLAAGTRNEVPVMLPLIDMCNHSFNPNAQIIQEEDDLQLLIKVVAETEIKQNDSLLPNYGCLSNDFFL 851 P+L+KW + G + + F + E G GL A+++I L + +P + + ES +SVL L SQ + + + + L LL ERA SFW PYI LP Y P++F+ ++++ L+ ++ V N ++ + A+ P F + WA+S+V +R ++ + G+R + ++PL DMCNH+ EDD + VA + K + + YG SN F+ Sbjct: 80 PELIKWATENGA----STEGFEIANFEEEGFGLKATREIKAEELFLWVPRKLLMTVES----AKNSVLGSLYSQDRILQAMGNITLAFHLLCERANPNSFWLPYIQTLPSEYDTPLYFEEDEVQYLRSTQAIHDVFSQYKNTARQYAYFYKVIQTHPNASKLPLKDSFTYDDYR-----WAVSSVMTRQNQIPTED---GSRVTL-ALIPLWDMCNHTNGLITTGYNLEDD---RCECVALQDFKAGEQIYIFYGTRSNAEFV 322 The following BLAST results are available for this feature:
BLAST of CF832184 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF832184 ID=CF832184; Name=CF832184; organism=Citrus sinensis; type=EST; length=852bpback to top |