CF832212

Overview
NameCF832212
Unique NameCF832212
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length756
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1050 contig Csv1_Contig1050:235..990. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832212 vs. ExPASy Swiss-Prot
Match: ASO_CUCPM (L-ascorbate oxidase OS=Cucurbita pepo var. melopepo PE=1 SV=1)

HSP 1 Score: 310.842 bits (795), Expect = 4.987e-84
Identity = 143/218 (65.60%), Postives = 164/218 (75.23%), Query Frame = -2
Query:  102 MGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLNLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACGLTGKRFMNPKQN 755
            MGSPKPP  F+RR+ LLNTQN ING+ KWAIN+VSL LPPTPYLG++KY L  AFDQN PPE F  +YD+  PP N  T +G+GVY   +   VDVILQNAN ++ NLSETHPWHLHGHDFWVLG G+GKF+ E+E           NT VIFPYGWTA+RFVADNPG WAFHCHIEPH H+GMGVV A GVE VG IP +ALACG T K  +N  +N
Sbjct:  334 MGSPKPPVKFNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVEKVGRIPTKALACGGTAKSLINNPKN 551          
BLAST of CF832212 vs. ExPASy Swiss-Prot
Match: ASO_TOBAC (L-ascorbate oxidase OS=Nicotiana tabacum GN=AAO PE=2 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 4.667e-82
Identity = 142/218 (65.14%), Postives = 167/218 (76.61%), Query Frame = -2
Query:  102 MGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLNLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACGLTGKRFMNPKQN 755
            MGSPKPP   HRR+ LLNTQN I+G+TKWAINNVSL LP   YLGSI+YG+ +AFD   PP+NF  +YDV+K   N+N+T G+GVYML  NTT+D+ILQNANA+  ++SE HPWHLHGHDFWVLG GEGKF+++D            NTAVIFP+GWTALRFV DNPG WAFHCHIEPH H+GMGV+ A GV  V  IP +ALACGLTGK  M+ K N
Sbjct:  362 MGSPKPPPQNHRRIILLNTQNKIDGYTKWAINNVSLVLPTQLYLGSIRYGI-NAFDTKPPPDNFPKDYDVLKQAPNSNSTYGNGVYMLKFNTTIDIILQNANALAKDVSEIHPWHLHGHDFWVLGYGEGKFSEKDVKKFNLKNPPLRNTAVIFPFGWTALRFVTDNPGVWAFHCHIEPHLHMGMGVIFAEGVHLVKKIPKEALACGLTGKMLMSNKHN 578          
BLAST of CF832212 vs. ExPASy Swiss-Prot
Match: ASO_CUCMA (L-ascorbate oxidase OS=Cucurbita maxima GN=AAO PE=1 SV=2)

HSP 1 Score: 303.523 bits (776), Expect = 7.961e-82
Identity = 140/214 (65.42%), Postives = 160/214 (74.77%), Query Frame = -2
Query:  114 MGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLNLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACGLTGKRFMN 755
            MGSPKPP   +RR+ LLNTQN ING+ KWAIN+VSL LPPTPYLG++K+ L  AFDQN PPE F  +YD+  PP N  T +G+GVY   +   VDVILQNAN ++ NLSE HPWHLHGHDFWVLG G+GKFT E+E           NT VIFPYGWTA+RFVADNPG WAFHCHIEPH H+GMGVV A GVE VG IP +ALACG T K  +N
Sbjct:  364 MGSPKPPVKSNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKFNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTKIGNGVYQFKIGEIVDVILQNANMMKENLSEIHPWHLHGHDFWVLGYGDGKFTAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVEKVGRIPTKALACGGTAKSLIN 577          
BLAST of CF832212 vs. ExPASy Swiss-Prot
Match: ASO_CUCSA (L-ascorbate oxidase OS=Cucumis sativus PE=1 SV=1)

HSP 1 Score: 296.975 bits (759), Expect = 7.451e-80
Identity = 141/209 (67.46%), Postives = 154/209 (73.68%), Query Frame = -2
Query:  132 MGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLNLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKF-TKEDEXXXXXXXXXXXNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACGLT 755
            MGSPKPP  ++RRL LLNTQN INGF KWAINNVSL LPPTPYL ++K  L  AF+QN PPE F   YD+  PP N  TT G+GVY   +  TVDVILQNAN + PN+SE HPWHLHGHDFWVLG GEGKF   EDE           NT VIFPYGWTA+RFVADNPG WAFHCHIEPH H+GMGVV A GV  VG IP +ALACG T
Sbjct:  369 MGSPKPPVRYNRRLFLLNTQNRINGFMKWAINNVSLALPPTPYLAAMKMRLNTAFNQNPPPETFPLNYDINNPPPNPETTTGNGVYKFNMGETVDVILQNANMLNPNMSEIHPWHLHGHDFWVLGYGEGKFYAPEDEKKLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVHMVGMIPPKALACGST 577          
BLAST of CF832212 vs. ExPASy Swiss-Prot
Match: LAC16_ARATH (Laccase-16 OS=Arabidopsis thaliana GN=LAC16 PE=2 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 8.946e-25
Identity = 69/177 (38.98%), Postives = 95/177 (53.67%), Query Frame = -2
Query:  147 INNVSLNLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPP---VNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXNTAVIFPYG-WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQAL 665
            INNV+  +P T  L +  + +   F  + P +  SN YD   P    VNA T  G+ +Y L  N TV ++LQN   I   LS+ HP+HLHG +F+ +GRG G F  E +              V  P G WTA+RF+ADNPG W  HCH+E   H   G+ +A  V+  G+ P+Q+L
Sbjct:  387 INNVTFTMPKTALLQAHFFNISGVFTDDFPAKP-SNPYDYTAPVKLGVNAATMKGTKLYRLPYNATVQIVLQNTAMI---LSDNHPFHLHGFNFFEVGRGLGNFNPEKDPKAFNLVDPVERNTVGVPAGGWTAIRFIADNPGVWFMHCHLE--LHTTWGLKMAFVVDN-GHGPDQSL 556          
BLAST of CF832212 vs. ExPASy Swiss-Prot
Match: LAC10_ARATH (Laccase-10 OS=Arabidopsis thaliana GN=LAC10 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.694e-21
Identity = 63/175 (36.00%), Postives = 90/175 (51.43%), Query Frame = -2
Query:  147 AINNVSLNLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKF-TKEDEXXXXXXXXXXXNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQAL 668
            AINN++  +P T  L +  + L   +  + P +         KPP N  T   + +Y L  N+TV V+LQ+   + P   E HP HLHG +F+V+G G G + +K+D            NT  +   GW A+RF ADNPG W  HCH+E   H   G+ +A  VE  G  PNQ++
Sbjct:  380 AINNITFKMPKTALLQAHYFNLTGIYTTDFPAKPRRVFDFTGKPPSNLATMKATKLYKLPYNSTVQVVLQDTGNVAP---ENHPIHLHGFNFFVVGLGTGNYNSKKDSNKFNLVDPVERNTVGVPSGGWAAIRFRADNPGVWFMHCHLE--VHTTWGLKMAFLVEN-GKGPNQSI 548          
BLAST of CF832212 vs. ExPASy Swiss-Prot
Match: LAC22_ORYSJ (Laccase-22 OS=Oryza sativa subsp. japonica GN=LAC22 PE=2 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 4.595e-21
Identity = 60/174 (34.48%), Postives = 84/174 (48.28%), Query Frame = -2
Query:  147 INNVSLNLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXNTAVIFPYG-WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQAL 665
            INNV+  +P TP L +  Y +   F ++ P             P N  T  G+ VY L  N +V V+LQ+   I P   E+HP HLHG +F+V+G+G G +                   +  P G WTA+RF +DNPG W  HCH E   H   G+ +A  V+  G  P++ L
Sbjct:  387 INNVTFIMPSTPILQAHYYNIPGVFTEDFPATPLHKFNYTGSGPKNLQTMNGTRVYRLPYNASVQVVLQDTGIISP---ESHPIHLHGFNFFVVGKGVGNYNPRTSPSTFNLIDPIERNTIGVPTGGWTAIRFRSDNPGVWFMHCHFE--VHTSWGLKMAFVVDN-GKRPSETL 554          
BLAST of CF832212 vs. ExPASy Swiss-Prot
Match: LAC2_ORYSJ (Laccase-2 OS=Oryza sativa subsp. japonica GN=LAC2 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.001e-21
Identity = 61/178 (34.27%), Postives = 95/178 (53.37%), Query Frame = -2
Query:  147 AINNVSLNLPPTPYLGSIKYGLKDAFDQN---GPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXNTAVIFPYG-WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQAL 668
            ++NN++  +P T  L +  YG K  F  +    PP  F+  Y  +       T+LG+ +  +  N TV+++LQ+ N +     E+HP+HLHG++F+V+GRG G F    +              V  P G WTA+RF ADNPG W  HCH+E   H   G+ +A  VE  G+ P++++
Sbjct:  383 SLNNITFVMPRTALLQAHYYGQKGVFAADFPDRPPARFN--YTGVPLTAGLGTSLGTRLSKIAYNATVELVLQDTNLLSV---ESHPFHLHGYNFFVVGRGVGNFDPAKDPAKYNLVDPPERNTVGVPAGGWTAIRFRADNPGVWFLHCHLE--VHTSWGLKMAFLVED-GSGPDESV 552          
BLAST of CF832212 vs. ExPASy Swiss-Prot
Match: LAC11_ORYSJ (Putative laccase-11 OS=Oryza sativa subsp. japonica GN=LAC11 PE=5 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 3.890e-20
Identity = 61/181 (33.70%), Postives = 90/181 (49.72%), Query Frame = -2
Query:  147 AINNVSLNLPPTPYLGS-IKYGLKDAFDQNGP-----PENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXNTAVIFPY-GWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQAL 668
            ++NNVS  +P T  L +  +         N P     P N++       PP N   T G+ V  L  NTTV+V+LQ+ + +    +E+HP HLHG+DF+V+G G G +   ++              +  P  GW A+RFVADNPG W  HCH++ H   G+ +   +     G +PNQ L
Sbjct:  360 SMNNVSFVMPRTSLLQAHYQRRYNGVLAANFPAAPRTPFNYTGT-----PPNNTFVTHGTRVVPLSFNTTVEVVLQDTSILG---AESHPLHLHGYDFYVVGTGFGNYDASNDTAKYNLVDPVQRNTISVPTAGWVAIRFVADNPGVWIMHCHLDVHLSWGLSMAWLV---NDGPLPNQKL 529          
BLAST of CF832212 vs. ExPASy Swiss-Prot
Match: LAC7_ORYSJ (Laccase-7 OS=Oryza sativa subsp. japonica GN=LAC7 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.635e-20
Identity = 59/174 (33.91%), Postives = 89/174 (51.15%), Query Frame = -2
Query:  186 NTQNTINGFT-KWAINNVSLNLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLAL 704
            +TQ++ +G +   A+N VS  LP    L   ++        N  P  ++ ++     P       G+ V  L  N+TV+++LQN  A     SE HP HLHG +F+VL +G G FT  +            NT  +   GW  +RFVA+NPG W FHCH++ H  +G+G+V A+
Sbjct:  377 STQSSCSGKSVAAAMNGVSFRLPSQMSLLEAQF--------NRTPGVYTADFPDAPQPSGTPMVEGTKVRRLKYNSTVEIVLQNPTAFP---SENHPIHLHGFNFFVLAQGLGNFTPGNVSGYNLVDPVSRNTLAVPTGGWAVIRFVANNPGMWFFHCHLDAHVPMGLGMVFAV 539          
The following BLAST results are available for this feature:
BLAST of CF832212 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
ASO_CUCPM4.987e-8465.60L-ascorbate oxidase OS=Cucurbita pepo var. melopep... [more]
ASO_TOBAC4.667e-8265.14L-ascorbate oxidase OS=Nicotiana tabacum GN=AAO PE... [more]
ASO_CUCMA7.961e-8265.42L-ascorbate oxidase OS=Cucurbita maxima GN=AAO PE=... [more]
ASO_CUCSA7.451e-8067.46L-ascorbate oxidase OS=Cucumis sativus PE=1 SV=1[more]
LAC16_ARATH8.946e-2538.98Laccase-16 OS=Arabidopsis thaliana GN=LAC16 PE=2 S... [more]
LAC10_ARATH2.694e-2136.00Laccase-10 OS=Arabidopsis thaliana GN=LAC10 PE=2 S... [more]
LAC22_ORYSJ4.595e-2134.48Laccase-22 OS=Oryza sativa subsp. japonica GN=LAC2... [more]
LAC2_ORYSJ6.001e-2134.27Laccase-2 OS=Oryza sativa subsp. japonica GN=LAC2 ... [more]
LAC11_ORYSJ3.890e-2033.70Putative laccase-11 OS=Oryza sativa subsp. japonic... [more]
LAC7_ORYSJ6.635e-2033.91Laccase-7 OS=Oryza sativa subsp. japonica GN=LAC7 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01H24_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01H24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832212 ID=CF832212; Name=CF832212; organism=Citrus sinensis; type=EST; length=756bp
TTTTTTTTTTTTTATTCACTCCGAAATTTTATTAATATTAATACCTTTAC
AACAATAGAAACTCCAGGAATAAAGTACATAAAACCCTCTAGCTAGCCTC
AATTTTGTTTAGGGTTCATGAACCTTTTCCCAGTCAAACCACAAGCCAAC
GCCTGGTTTGGAATATTACCAACGGTTTCAACACCAAGAGCAAGAACCAC
ACCCATTCCAATATGGAAATGGGGCTCAATATGGCAGTGAAATGCCCAAG
CACCTGGATTATCAGCAACAAATCTTAAAGCAGTCCAGCCATATGGGAAT
ATCACCGCAGTATTTTTCAATGGTGGATTCTTCAAGTTAAATTTCTTCTC
ATCTTCTTTCGTAAACTTCCCTTCTCCGCGCCCTAATACCCAAAAATCAT
GCCCATGCAAATGCCAAGGGTGGGTTTCACTCAAGTTTGGCCTTATCGCG
TTTGCATTTTGAAGTATAACATCAACTGTGGTGTTTAAACCAAGCATGTA
AACCCCACTTCCAAGAGTTGTATTAGCGTTTACAGGAGGTTTCATCACGT
CATACTCATTCGAGAAGTTTTCGGGGGGACCATTCTGATCAAAAGCATCT
TTAAGACCATATTTGATGGATCCTAAGTAAGGAGTGGGGGGTAAATTCAG
GGACACATTGTTAATAGCCCACTTAGTGAACCCGTTAATGGTGTTTTGAG
TGTTAAGAAGGGTGAGCCGACGGTGGAAATTTGTGGGAGGCTTGGGGGAT
CCCATT
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