CF832247

Overview
NameCF832247
Unique NameCF832247
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length476
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1145 contig Csv1_Contig1145:14..489. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832247 vs. ExPASy Swiss-Prot
Match: PER15_IPOBA (Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 6.451e-32
Identity = 67/87 (77.01%), Postives = 74/87 (85.06%), Query Frame = -1
Query:  210 LTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 470
            +TNLD +TPD FDN+YFSNLQ N GLLQSDQELFST GA TI IVNNFS+N+TAFFESF  SMI MGN+S LTG+ GEIRSNCRR N
Sbjct:  241 VTNLDPTTPDTFDNNYFSNLQTNRGLLQSDQELFSTSGAPTIAIVNNFSANQTAFFESFVQSMINMGNISPLTGSNGEIRSNCRRPN 327          
BLAST of CF832247 vs. ExPASy Swiss-Prot
Match: PER54_ARATH (Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.877e-31
Identity = 62/95 (65.26%), Postives = 80/95 (84.21%), Query Frame = -1
Query:  186 LTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVNANNLSTRS 470
            +TNLDLSTPD FDN+YF+NLQ+NNGLLQSDQELFS  G+ T+PIVN+F+SN+T FFE+F  SMI+MGN+S LTG+ GEIR +C+ VN  + +T +
Sbjct:  248 ITNLDLSTPDAFDNNYFTNLQSNNGLLQSDQELFSNTGSATVPIVNSFASNQTLFFEAFVQSMIKMGNISPLTGSSGEIRQDCKVVNGQSSATEA 342          
BLAST of CF832247 vs. ExPASy Swiss-Prot
Match: PER53_ARATH (Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 2.710e-30
Identity = 61/91 (67.03%), Postives = 78/91 (85.71%), Query Frame = -1
Query:  204 SVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVNAN 476
            S +TNLDLSTPD FDN+YF+NLQ+N+GLLQSDQELFST G+ TI IV +F+SN+T FF++FA SMI MGN+S LTG+ GEIR +C++VN +
Sbjct:  245 STITNLDLSTPDAFDNNYFANLQSNDGLLQSDQELFSTTGSSTIAIVTSFASNQTLFFQAFAQSMINMGNISPLTGSNGEIRLDCKKVNGS 335          
BLAST of CF832247 vs. ExPASy Swiss-Prot
Match: PERA2_ARMRU (Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.030e-29
Identity = 60/91 (65.93%), Postives = 78/91 (85.71%), Query Frame = -1
Query:  204 SVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVNAN 476
            S +TNLDLSTPD FDN+YF+NLQ+NNGLLQSDQELFST G+ TI +V +F+SN+T FF++FA SMI MGN+S LTG+ GEIR +C++V+ +
Sbjct:  215 STITNLDLSTPDAFDNNYFANLQSNNGLLQSDQELFSTLGSATIAVVTSFASNQTLFFQAFAQSMINMGNISPLTGSNGEIRLDCKKVDGS 305          
BLAST of CF832247 vs. ExPASy Swiss-Prot
Match: PER22_ARATH (Peroxidase 22 OS=Arabidopsis thaliana GN=PER22 PE=1 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 6.675e-29
Identity = 64/107 (59.81%), Postives = 79/107 (73.83%), Query Frame = -1
Query:  156 SVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVNANNLSTRSSSDGGLVSSI 476
            +VL N D+ TPD FD+ Y++NL+   GL+QSDQELFSTPGADTIP+VN +SS+ + FF +F  +MIRMGNL  LTGTQGEIR NCR VN         +D G+VSSI
Sbjct:  245 TVLVNFDVVTPDAFDSQYYTNLRNGKGLIQSDQELFSTPGADTIPLVNQYSSDMSVFFRAFIDAMIRMGNLRPLTGTQGEIRQNCRVVNPRIRVV--ENDDGVVSSI 349          
BLAST of CF832247 vs. ExPASy Swiss-Prot
Match: PER3_ARMRU (Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.139e-28
Identity = 65/107 (60.75%), Postives = 79/107 (73.83%), Query Frame = -1
Query:  156 SVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVNANNLSTRSSSDGGLVSSI 476
            +VL N D+ TP+ FD  Y++NL+   GL+QSDQELFSTPGADTIP+VN +SSN  AFF +F  +MIRMGNL  LTGTQGEIR NCR VN+        +D G+VSSI
Sbjct:  245 TVLVNFDVVTPNTFDRQYYTNLRNGKGLIQSDQELFSTPGADTIPLVNLYSSNTFAFFGAFVDAMIRMGNLRPLTGTQGEIRQNCRVVNSR--IRGMENDDGVVSSI 349          
BLAST of CF832247 vs. ExPASy Swiss-Prot
Match: PERE5_ARMRU (Peroxidase E5 OS=Armoracia rusticana GN=HRPE5 PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 4.327e-28
Identity = 59/90 (65.56%), Postives = 73/90 (81.11%), Query Frame = -1
Query:  207 SVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVNA 476
            +VL N D+ TP+ FDN +++NL+   GL+QSDQELFSTPGADTIP+VN +SSN  +FF +FA +MIRMGNL  LTGTQGEIR NCR VN+
Sbjct:  216 TVLVNFDVMTPNTFDNQFYTNLRNGKGLIQSDQELFSTPGADTIPLVNLYSSNTLSFFGAFADAMIRMGNLRPLTGTQGEIRQNCRVVNS 305          
BLAST of CF832247 vs. ExPASy Swiss-Prot
Match: PERX_TOBAC (Lignin-forming anionic peroxidase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 7.380e-28
Identity = 55/89 (61.80%), Postives = 74/89 (83.15%), Query Frame = -1
Query:  210 SVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 476
            +  TNLD+STP+ FDNDYF+NLQ+N GLLQ+DQELFST G+ TI IVN ++ ++T FF+ F  SMI++GN+S LTGT G+IR++C+RVN
Sbjct:  236 NTFTNLDISTPNDFDNDYFTNLQSNQGLLQTDQELFSTSGSATIAIVNRYAGSQTQFFDDFVSSMIKLGNISPLTGTNGQIRTDCKRVN 324          
BLAST of CF832247 vs. ExPASy Swiss-Prot
Match: PER23_ARATH (Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 1.392e-26
Identity = 63/107 (58.88%), Postives = 73/107 (68.22%), Query Frame = -1
Query:  156 SVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVNANNLSTRSSSDGGLVSSI 476
            +VL N D  TP  FD  Y++NL    GL+QSDQ LFSTPGADTIP+VN +SSN   FF +F  +MIRMGNL  LTGTQGEIR NCR VN         +D G+VSSI
Sbjct:  245 TVLVNFDSVTPTTFDRQYYTNLLNGKGLIQSDQVLFSTPGADTIPLVNQYSSNTFVFFGAFVDAMIRMGNLKPLTGTQGEIRQNCRVVNPRIRVV--ENDDGVVSSI 349          
BLAST of CF832247 vs. ExPASy Swiss-Prot
Match: PER58_ARATH (Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 7.637e-25
Identity = 51/85 (60.00%), Postives = 67/85 (78.82%), Query Frame = -1
Query:  210 NLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 464
            NLD ++PD FDNDYF NLQ N G+++SDQ LFS+ GA T+ +VN F+ N+  FF +FA SMI+MGN+ +LTG +GEIR +CRRVN
Sbjct:  245 NLDPTSPDSFDNDYFKNLQNNRGVIESDQILFSSTGAPTVSLVNRFAENQNEFFTNFARSMIKMGNVRILTGREGEIRRDCRRVN 329          
The following BLAST results are available for this feature:
BLAST of CF832247 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
PER15_IPOBA6.451e-3277.01Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1[more]
PER54_ARATH1.877e-3165.26Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=... [more]
PER53_ARATH2.710e-3067.03Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=... [more]
PERA2_ARMRU1.030e-2965.93Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1... [more]
PER22_ARATH6.675e-2959.81Peroxidase 22 OS=Arabidopsis thaliana GN=PER22 PE=... [more]
PER3_ARMRU1.139e-2860.75Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3... [more]
PERE5_ARMRU4.327e-2865.56Peroxidase E5 OS=Armoracia rusticana GN=HRPE5 PE=1... [more]
PERX_TOBAC7.380e-2861.80Lignin-forming anionic peroxidase OS=Nicotiana tab... [more]
PER23_ARATH1.392e-2658.88Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=... [more]
PER58_ARATH7.637e-2560.00Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01I21_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01I21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832247 ID=CF832247; Name=CF832247; organism=Citrus sinensis; type=EST; length=476bp
TTTTTTTTTTTTTTTTTCCAACGGGCTCATAATTTTATTCAGACCCTGAA
AATATTGTTAGGACAAACACGAGACAAGGTACATGAGTTTGTTACCCACA
AACTCTCAACAGCAAAACTACTTCACACAGTTTTATTTTATGCTTTCATG
ATTTAGATAGAGCTGACCAAACCGCCATCTGATGATGATCTGGTTGATAA
ATTGTTTGCATTAACCCTTCTGCAGTTTGACCTGATCTCTCCTTGAGTCC
CTGTTAGAAGGCTTAAATTCCCCATTCTGATCATAGAAACCGCAAAGCTT
TCAAAGAAAGCAGTTTCGTTGCTGCTAAAGTTGTTGACAATGGGAATGGT
ATCGGCGCCGGGTGTCGAAAACAGCTCTTGATCACTCTGTAAAAGGCCAT
TGTTAGCTTGAAGATTGGAGAAATAATCGTTGTCAAAACCATCCGGTGTT
GAGAGATCAAGATTCGTTAGGACGCT
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