CF832360
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832360 vs. ExPASy Swiss-Prot
Match: HDDC2_HUMAN (HD domain-containing protein 2 OS=Homo sapiens GN=HDDC2 PE=1 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.794e-41 Identity = 85/160 (53.12%), Postives = 116/160 (72.50%), Query Frame = -2 Query: 214 IDFLSLCHRLKTTKRAGWVKRNVNNPESIADHMYRMGLMGLIMADIPGIDRDKCIKMAIVHDIAEAIVGDITPSDGIPKEEKSQREREAITSMCKLLGQGARAKEIDELWMEYEENSTAEAKIVKDFDKAEMILQAVEYENEQGKD--LEEFFQSTAGKF 687 + FL L +LK R GWV RNV PES++DHMYRM +M +++ D +++D+C+++A+VHD+AE IVGDI P+D IPKEEK +RE EA+ + +LL + R KE+ ELW EYE S+AEAK VK D+ EMILQA EYE+ + K L++F+ STAGKF Sbjct: 18 LQFLRLVGQLKRVPRTGWVYRNVQRPESVSDHMYRMAVMAMVIKD-DRLNKDRCVRLALVHDMAECIVGDIAPADNIPKEEKHRREEEAMKQITQLLPEDLR-KELYELWEEYETQSSAEAKFVKQLDQCEMILQASEYEDLEHKPGRLQDFYDSTAGKF 175
BLAST of CF832360 vs. ExPASy Swiss-Prot
Match: HDDC2_BOVIN (HD domain-containing protein 2 OS=Bos taurus GN=HDDC2 PE=2 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 6.818e-41 Identity = 83/160 (51.88%), Postives = 115/160 (71.88%), Query Frame = -2 Query: 214 IDFLSLCHRLKTTKRAGWVKRNVNNPESIADHMYRMGLMGLIMADIPGIDRDKCIKMAIVHDIAEAIVGDITPSDGIPKEEKSQREREAITSMCKLLGQGARAKEIDELWMEYEENSTAEAKIVKDFDKAEMILQAVEYENEQGKD--LEEFFQSTAGKF 687 + FL L +LK R GWV RNV PES++DHMYRM +M L+ D +++D+C+++A+VHD+AE IVGDI P+D +P+EEK +RE EA+ + +LL + + KE+ ELW EYE S+AEAK VK D+ EMILQA EYE+ + K L++F+ STAGKF Sbjct: 19 LQFLRLVGQLKRVPRTGWVYRNVQKPESVSDHMYRMAVMALVTKD-EHLNKDRCVRLALVHDMAECIVGDIAPADNVPREEKHRREEEAMKQLTQLLPEDLQ-KELYELWEEYETQSSAEAKFVKQLDQCEMILQASEYEDLENKPGRLQDFYDSTAGKF 176
BLAST of CF832360 vs. ExPASy Swiss-Prot
Match: HDDC2_MOUSE (HD domain-containing protein 2 OS=Mus musculus GN=Hddc2 PE=2 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 8.905e-41 Identity = 85/158 (53.80%), Postives = 113/158 (71.52%), Query Frame = -2 Query: 214 FLSLCHRLKTTKRAGWVKRNVNNPESIADHMYRMGLMGLIMADIPGIDRDKCIKMAIVHDIAEAIVGDITPSDGIPKEEKSQREREAITSMCKLLGQGARAKEIDELWMEYEENSTAEAKIVKDFDKAEMILQAVEYENEQGKD--LEEFFQSTAGKF 681 FL L +LK R GWV RNV PES++DHMYRM +M ++ D +++D+CI++A+VHD+AE IVGDI P+D IPKEEK +RE EA+ + +LL + R KE+ ELW EYE S+ EAK VK D+ EMILQA EYE+ + K L++F+ STAGKF Sbjct: 15 FLRLVGQLKRVPRTGWVYRNVEKPESVSDHMYRMAVMAMVTRD-DRLNKDRCIRLALVHDMAECIVGDIAPADNIPKEEKHRREEEAMKQITQLLPEDLR-KELYELWEEYETQSSEEAKFVKQLDQCEMILQASEYEDLENKPGRLQDFYDSTAGKF 170
BLAST of CF832360 vs. ExPASy Swiss-Prot
Match: HDDC2_DICDI (HD domain-containing protein 2 homolog OS=Dictyostelium discoideum GN=hddc2 PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.384e-40 Identity = 94/187 (50.27%), Postives = 115/187 (61.50%), Query Frame = -2 Query: 163 IDFLSLCHRLKTTKRAGWVKRNVNNPESIADHMYRMGLMG-------LIMADIPGIDRDKCIKMAIVHDIAEAIVGDITPSDGIPKEEKSQREREAITSMCKLLGQGARAKEIDELWMEYEENSTAEAKIVKDFDKAEMILQAVEYEN-----EQGKDLEEFFQSTAGKFQTELGKAWAAEIVSRRK 687 ++F +C +LKT KR GWV V PES++DHMYRM +MG LI D ID+ K IKMA+VHD+ E++VGD TP D I KEEK Q E+ AI + L G KEI +LW EYE+ T EA +VKDFDK EMILQA EYE E L+ FF ST GKF L K+ A ++ S RK Sbjct: 5 LEFFKICGKLKTLKRTGWVNHGVELPESVSDHMYRMAMMGMCLDKKELIGEDGKEIDKMKIIKMALVHDLGESLVGDFTPHDKITKEEKYQLEKNAIIEITNTL-SGEVGKEIFDLWQEYEDCKTNEALLVKDFDKFEMILQAYEYEKQPHQLENKIKLQSFFDSTRGKFHHPLFKSLALQLESDRK 190
BLAST of CF832360 vs. ExPASy Swiss-Prot
Match: HDDC2_DANRE (HD domain-containing protein 2 OS=Danio rerio GN=hddc2 PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 5.772e-40 Identity = 82/160 (51.25%), Postives = 112/160 (70.00%), Query Frame = -2 Query: 214 IDFLSLCHRLKTTKRAGWVKRNVNNPESIADHMYRMGLMGLIMADIPGIDRDKCIKMAIVHDIAEAIVGDITPSDGIPKEEKSQREREAITSMCKLLGQGARAKEIDELWMEYEENSTAEAKIVKDFDKAEMILQAVEYENEQGKD--LEEFFQSTAGKF 687 + F+ L +LK R GWV RN+ PES++DHMYRM +M L + DI +++++C+K+A+VHD+AE IVGDI P+D + K EK +RE++A+ + LL G R KEI LW EYE S+ EAK+VK+ D EMI+QA EYE +GK L+EFF ST GKF Sbjct: 5 LQFMKLVGQLKRVPRTGWVYRNIKQPESVSDHMYRMSMMALTIQDI-SVNKERCMKLALVHDLAECIVGDIAPADNVSKAEKHRREKDAMVHITGLLDDGLR-KEIYNLWEEYETQSSPEAKLVKELDNLEMIIQAHEYEELEGKPGRLQEFFVSTEGKF 162
BLAST of CF832360 vs. ExPASy Swiss-Prot
Match: YC0H_SCHPO (HD domain-containing protein C4G3.17 OS=Schizosaccharomyces pombe GN=SPCC4G3.17 PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 5.402e-38 Identity = 86/182 (47.25%), Postives = 120/182 (65.93%), Query Frame = -2 Query: 160 IDFLSLCHRLKTTKRAGWVKRNVNNPESIADHMYRMGLMGLIMADIPGIDRDKCIKMAIVHDIAEAIVGDITPSDGIPKEEKSQREREAITSMCKL---LGQGARAKEIDELWMEYEENSTAEAKIVKDFDKAEMILQAVEYENEQG--KDLEEFFQSTAGK-FQTELGKAWAAEIVSRRKK 687 + FL RLKTT R GW+ + PESIADHMYRMG++ ++ D P I++++C+K+A+VHD+AE+IVGDITP + + KEEK + E EA+ S+ + L +A+EI EL++EYE ST EAK VKD DK EMI Q EYE + KDL +F + AGK Q L K W +++ R++ Sbjct: 10 VPFLDCLSRLKTTPRTGWLYHGIEKPESIADHMYRMGILTMLCND-PSINKERCLKIAVVHDMAESIVGDITPHENVSKEEKHRMESEAMVSITQQLIPLNLSLQAEEIKELFLEYESASTPEAKFVKDIDKFEMIAQMFEYERKFNGEKDLSQF--TWAGKLIQHPLVKGWLNDVLQEREQ 188
BLAST of CF832360 vs. ExPASy Swiss-Prot
Match: HDDC2_XENLA (HD domain-containing protein 2 OS=Xenopus laevis GN=hddc2 PE=2 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.681e-37 Identity = 76/161 (47.20%), Postives = 112/161 (69.57%), Query Frame = -2 Query: 211 IDFLSLCHRLKTTKRAGWVKRNVNNPESIADHMYRMGLMGLIMADIPGIDRDKCIKMAIVHDIAEAIVGDITPSDGIPKEEKSQREREAITSMCKLLGQGARAKEIDELWMEYEENSTAEAKIVKDFDKAEMILQAVEYENEQGKD--LEEFFQSTAGKFQ 687 + F+ L +LK R GW+ R V PES++DHMYRM +M ++ D +++D+CI++A+VHD+AE IVGDI P+D I KEEK ++E+ A+ + +LL + E+ +LW EYE TAEAK VK+ D+ EMILQA+EYE + + L++F+ STAGKF+ Sbjct: 15 LQFMKLVGQLKRVPRTGWIYRQVEKPESVSDHMYRMAVMAMLTEDRK-LNKDRCIRLALVHDMAECIVGDIAPADNIAKEEKHRKEKAAMEHLTQLLPDNLKT-EVYDLWEEYEHQFTAEAKFVKELDQCEMILQALEYEELEKRPGRLQDFYNSTAGKFK 173
BLAST of CF832360 vs. ExPASy Swiss-Prot
Match: YB92_YEAST (HD domain-containing protein YBR242W OS=Saccharomyces cerevisiae GN=YBR242W PE=1 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.834e-33 Identity = 75/179 (41.90%), Postives = 117/179 (65.36%), Query Frame = -2 Query: 160 FLSLCHRLKTTKRAGWVKRNVNNPESIADHMYRMGLMGLIMADIPGIDRDKCIKMAIVHDIAEAIVGDITPSDGIPKEEKSQREREAITSMCKLL---GQGARAKEIDELWMEYEENSTAEAKIVKDFDKAEMILQAVEYENEQ--GKDLEEFFQSTAGKFQTELGKAWAAEIVSRRKK 681 FL++ +LK +R G++ + ESI+DHMYR+ ++ +++ D ++RDKC+++A+VHDIAE++VGDITP D I KEEK +RE E I +C L AKEI + W+ YE ++ EA+ VKD DK EM++Q EYE E K+ ++FF + A +T+ K W +++V +R+K Sbjct: 51 FLNVVQQLKIQRRTGYLDLGIKECESISDHMYRLSIITMLIKD-SRVNRDKCVRIALVHDIAESLVGDITPVDPIGKEEKHRREWETIKYLCNALIKPYNEIAAKEIMDDWLAYENVTSLEARYVKDIDKYEMLVQCFEYEREYKGTKNFDDFFGAVA-SIKTDEVKGWTSDLVVQRQK 227
BLAST of CF832360 vs. ExPASy Swiss-Prot
Match: YGK1_YEAST (HD domain-containing protein YGL101W OS=Saccharomyces cerevisiae GN=YGL101W PE=1 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.166e-32 Identity = 72/178 (40.45%), Postives = 113/178 (63.48%), Query Frame = -2 Query: 163 FLSLCHRLKTTKRAGWVKRNVNNPESIADHMYRMGLMGLIMADIPGIDRDKCIKMAIVHDIAEAIVGDITPSDGIPKEEKSQREREAITSMCKLL---GQGARAKEIDELWMEYEENSTAEAKIVKDFDKAEMILQAVEYENEQG--KDLEEFFQSTAGKFQTELGKAWAAEIVSRRK 681 FL++ LKT +R GWV ++ ESI+DHMYRMGL +++ D +DR+KCI++A+VHD AE++VGDITP+D + KEEK +RE E + +C+ + + ++EI + W+ YE+ + E + VKD DK EM++Q EYE + KDL++F +T+ K W ++ R+ Sbjct: 32 FLNIIQLLKTQRRTGWVDHGIDPCESISDHMYRMGLTTMLITD-KNVDRNKCIRIALVHDFAESLVGDITPNDPMTKEEKHRREFETVKYLCESIIRPCSESASREILDDWLAYEKQTCLEGRYVKDIDKYEMLVQCFEYEQKYNGKKDLKQFL-GAINDIKTDEVKKWTQSLLEDRQ 207 The following BLAST results are available for this feature:
BLAST of CF832360 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF832360 ID=CF832360; Name=CF832360; organism=Citrus sinensis; type=EST; length=754bpback to top |