CF832361
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832361 vs. ExPASy Swiss-Prot
Match: HDDC2_HUMAN (HD domain-containing protein 2 OS=Homo sapiens GN=HDDC2 PE=1 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.172e-41 Identity = 85/160 (53.12%), Postives = 116/160 (72.50%), Query Frame = 3 Query: 225 IDFLSLCHRLKTTKRAGWVKRNVNNPESIADHMYRMGLMGLIMADIPGIDRDKCIKMAIVHDIAEAIVGDITPSDGIPKEEKSQREREAITYMCKLLGQGARAKEIDELWMEYEENSTAEAKIVKDFDKAEMILQAVEYENEQGKD--LEEFFQSTAGKF 698 + FL L +LK R GWV RNV PES++DHMYRM +M +++ D +++D+C+++A+VHD+AE IVGDI P+D IPKEEK +RE EA+ + +LL + R KE+ ELW EYE S+AEAK VK D+ EMILQA EYE+ + K L++F+ STAGKF Sbjct: 18 LQFLRLVGQLKRVPRTGWVYRNVQRPESVSDHMYRMAVMAMVIKD-DRLNKDRCVRLALVHDMAECIVGDIAPADNIPKEEKHRREEEAMKQITQLLPEDLR-KELYELWEEYETQSSAEAKFVKQLDQCEMILQASEYEDLEHKPGRLQDFYDSTAGKF 175
BLAST of CF832361 vs. ExPASy Swiss-Prot
Match: HDDC2_BOVIN (HD domain-containing protein 2 OS=Bos taurus GN=HDDC2 PE=2 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 8.255e-41 Identity = 83/160 (51.88%), Postives = 115/160 (71.88%), Query Frame = 3 Query: 225 IDFLSLCHRLKTTKRAGWVKRNVNNPESIADHMYRMGLMGLIMADIPGIDRDKCIKMAIVHDIAEAIVGDITPSDGIPKEEKSQREREAITYMCKLLGQGARAKEIDELWMEYEENSTAEAKIVKDFDKAEMILQAVEYENEQGKD--LEEFFQSTAGKF 698 + FL L +LK R GWV RNV PES++DHMYRM +M L+ D +++D+C+++A+VHD+AE IVGDI P+D +P+EEK +RE EA+ + +LL + + KE+ ELW EYE S+AEAK VK D+ EMILQA EYE+ + K L++F+ STAGKF Sbjct: 19 LQFLRLVGQLKRVPRTGWVYRNVQKPESVSDHMYRMAVMALVTKD-EHLNKDRCVRLALVHDMAECIVGDIAPADNVPREEKHRREEEAMKQLTQLLPEDLQ-KELYELWEEYETQSSAEAKFVKQLDQCEMILQASEYEDLENKPGRLQDFYDSTAGKF 176
BLAST of CF832361 vs. ExPASy Swiss-Prot
Match: HDDC2_MOUSE (HD domain-containing protein 2 OS=Mus musculus GN=Hddc2 PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.078e-40 Identity = 85/158 (53.80%), Postives = 113/158 (71.52%), Query Frame = 3 Query: 231 FLSLCHRLKTTKRAGWVKRNVNNPESIADHMYRMGLMGLIMADIPGIDRDKCIKMAIVHDIAEAIVGDITPSDGIPKEEKSQREREAITYMCKLLGQGARAKEIDELWMEYEENSTAEAKIVKDFDKAEMILQAVEYENEQGKD--LEEFFQSTAGKF 698 FL L +LK R GWV RNV PES++DHMYRM +M ++ D +++D+CI++A+VHD+AE IVGDI P+D IPKEEK +RE EA+ + +LL + R KE+ ELW EYE S+ EAK VK D+ EMILQA EYE+ + K L++F+ STAGKF Sbjct: 15 FLRLVGQLKRVPRTGWVYRNVEKPESVSDHMYRMAVMAMVTRD-DRLNKDRCIRLALVHDMAECIVGDIAPADNIPKEEKHRREEEAMKQITQLLPEDLR-KELYELWEEYETQSSEEAKFVKQLDQCEMILQASEYEDLENKPGRLQDFYDSTAGKF 170
BLAST of CF832361 vs. ExPASy Swiss-Prot
Match: HDDC2_DANRE (HD domain-containing protein 2 OS=Danio rerio GN=hddc2 PE=2 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.402e-40 Identity = 82/160 (51.25%), Postives = 113/160 (70.62%), Query Frame = 3 Query: 225 IDFLSLCHRLKTTKRAGWVKRNVNNPESIADHMYRMGLMGLIMADIPGIDRDKCIKMAIVHDIAEAIVGDITPSDGIPKEEKSQREREAITYMCKLLGQGARAKEIDELWMEYEENSTAEAKIVKDFDKAEMILQAVEYENEQGKD--LEEFFQSTAGKF 698 + F+ L +LK R GWV RN+ PES++DHMYRM +M L + DI +++++C+K+A+VHD+AE IVGDI P+D + K EK +RE++A+ ++ LL G R KEI LW EYE S+ EAK+VK+ D EMI+QA EYE +GK L+EFF ST GKF Sbjct: 5 LQFMKLVGQLKRVPRTGWVYRNIKQPESVSDHMYRMSMMALTIQDI-SVNKERCMKLALVHDLAECIVGDIAPADNVSKAEKHRREKDAMVHITGLLDDGLR-KEIYNLWEEYETQSSPEAKLVKELDNLEMIIQAHEYEELEGKPGRLQEFFVSTEGKF 162
BLAST of CF832361 vs. ExPASy Swiss-Prot
Match: HDDC2_DICDI (HD domain-containing protein 2 homolog OS=Dictyostelium discoideum GN=hddc2 PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.721e-38 Identity = 91/179 (50.84%), Postives = 110/179 (61.45%), Query Frame = 3 Query: 225 IDFLSLCHRLKTTKRAGWVKRNVNNPESIADHMYRMGLMG-------LIMADIPGIDRDKCIKMAIVHDIAEAIVGDITPSDGIPKEEKSQREREAITYMCKLLGQGARAKEIDELWMEYEENSTAEAKIVKDFDKAEMILQAVEYEN-----EQGKDLEEFFQSTAGKFQTELGKAWA 725 ++F +C +LKT KR GWV V PES++DHMYRM +MG LI D ID+ K IKMA+VHD+ E++VGD TP D I KEEK Q E+ AI + L G KEI +LW EYE+ T EA +VKDFDK EMILQA EYE E L+ FF ST GKF L K+ A Sbjct: 5 LEFFKICGKLKTLKRTGWVNHGVELPESVSDHMYRMAMMGMCLDKKELIGEDGKEIDKMKIIKMALVHDLGESLVGDFTPHDKITKEEKYQLEKNAIIEITNTL-SGEVGKEIFDLWQEYEDCKTNEALLVKDFDKFEMILQAYEYEKQPHQLENKIKLQSFFDSTRGKFHHPLFKSLA 182
BLAST of CF832361 vs. ExPASy Swiss-Prot
Match: HDDC2_XENLA (HD domain-containing protein 2 OS=Xenopus laevis GN=hddc2 PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.116e-37 Identity = 76/161 (47.20%), Postives = 113/161 (70.19%), Query Frame = 3 Query: 225 IDFLSLCHRLKTTKRAGWVKRNVNNPESIADHMYRMGLMGLIMADIPGIDRDKCIKMAIVHDIAEAIVGDITPSDGIPKEEKSQREREAITYMCKLLGQGARAKEIDELWMEYEENSTAEAKIVKDFDKAEMILQAVEYENEQGKD--LEEFFQSTAGKFQ 701 + F+ L +LK R GW+ R V PES++DHMYRM +M ++ D +++D+CI++A+VHD+AE IVGDI P+D I KEEK ++E+ A+ ++ +LL + E+ +LW EYE TAEAK VK+ D+ EMILQA+EYE + + L++F+ STAGKF+ Sbjct: 15 LQFMKLVGQLKRVPRTGWIYRQVEKPESVSDHMYRMAVMAMLTEDRK-LNKDRCIRLALVHDMAECIVGDIAPADNIAKEEKHRKEKAAMEHLTQLLPDNLKT-EVYDLWEEYEHQFTAEAKFVKELDQCEMILQALEYEELEKRPGRLQDFYNSTAGKFK 173
BLAST of CF832361 vs. ExPASy Swiss-Prot
Match: YC0H_SCHPO (HD domain-containing protein C4G3.17 OS=Schizosaccharomyces pombe GN=SPCC4G3.17 PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.611e-36 Identity = 86/172 (50.00%), Postives = 112/172 (65.12%), Query Frame = 3 Query: 225 IDFLSLCHRLKTTKRAGWVKRNVNNPESIADHMYRMGLMGLIMADIPGIDRDKCIKMAIVHDIAEAIVGDITPSDGIPKEEKSQREREA---ITYMCKLLGQGARAKEIDELWMEYEENSTAEAKIVKDFDKAEMILQAVEYENEQG--KDLEEFFQSTAGK-FQTELGKAW 722 + FL RLKTT R GW+ + PESIADHMYRMG++ ++ D P I++++C+K+A+VHD+AE+IVGDITP + + KEEK + E EA IT L +A+EI EL++EYE ST EAK VKD DK EMI Q EYE + KDL +F + AGK Q L K W Sbjct: 10 VPFLDCLSRLKTTPRTGWLYHGIEKPESIADHMYRMGILTMLCND-PSINKERCLKIAVVHDMAESIVGDITPHENVSKEEKHRMESEAMVSITQQLIPLNLSLQAEEIKELFLEYESASTPEAKFVKDIDKFEMIAQMFEYERKFNGEKDLSQF--TWAGKLIQHPLVKGW 178
BLAST of CF832361 vs. ExPASy Swiss-Prot
Match: YGK1_YEAST (HD domain-containing protein YGL101W OS=Saccharomyces cerevisiae GN=YGL101W PE=1 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.851e-33 Identity = 72/169 (42.60%), Postives = 110/169 (65.09%), Query Frame = 3 Query: 231 FLSLCHRLKTTKRAGWVKRNVNNPESIADHMYRMGLMGLIMADIPGIDRDKCIKMAIVHDIAEAIVGDITPSDGIPKEEKSQREREAITYMCKLL---GQGARAKEIDELWMEYEENSTAEAKIVKDFDKAEMILQAVEYENEQG--KDLEEFFQSTAGKFQTELGKAW 722 FL++ LKT +R GWV ++ ESI+DHMYRMGL +++ D +DR+KCI++A+VHD AE++VGDITP+D + KEEK +RE E + Y+C+ + + ++EI + W+ YE+ + E + VKD DK EM++Q EYE + KDL++F +T+ K W Sbjct: 32 FLNIIQLLKTQRRTGWVDHGIDPCESISDHMYRMGLTTMLITD-KNVDRNKCIRIALVHDFAESLVGDITPNDPMTKEEKHRREFETVKYLCESIIRPCSESASREILDDWLAYEKQTCLEGRYVKDIDKYEMLVQCFEYEQKYNGKKDLKQFL-GAINDIKTDEVKKW 198
BLAST of CF832361 vs. ExPASy Swiss-Prot
Match: YB92_YEAST (HD domain-containing protein YBR242W OS=Saccharomyces cerevisiae GN=YBR242W PE=1 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 9.148e-32 Identity = 73/169 (43.20%), Postives = 110/169 (65.09%), Query Frame = 3 Query: 231 FLSLCHRLKTTKRAGWVKRNVNNPESIADHMYRMGLMGLIMADIPGIDRDKCIKMAIVHDIAEAIVGDITPSDGIPKEEKSQREREAITYMCKLL---GQGARAKEIDELWMEYEENSTAEAKIVKDFDKAEMILQAVEYENEQ--GKDLEEFFQSTAGKFQTELGKAW 722 FL++ +LK +R G++ + ESI+DHMYR+ ++ +++ D ++RDKC+++A+VHDIAE++VGDITP D I KEEK +RE E I Y+C L AKEI + W+ YE ++ EA+ VKD DK EM++Q EYE E K+ ++FF + A +T+ K W Sbjct: 51 FLNVVQQLKIQRRTGYLDLGIKECESISDHMYRLSIITMLIKD-SRVNRDKCVRIALVHDIAESLVGDITPVDPIGKEEKHRREWETIKYLCNALIKPYNEIAAKEIMDDWLAYENVTSLEARYVKDIDKYEMLVQCFEYEREYKGTKNFDDFFGAVA-SIKTDEVKGW 217 The following BLAST results are available for this feature:
BLAST of CF832361 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF832361 ID=CF832361; Name=CF832361; organism=Citrus sinensis; type=EST; length=726bpback to top |