CF832401

Overview
NameCF832401
Unique NameCF832401
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length785
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1013 contig Csv1_Contig1013:351..1134. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832401 vs. ExPASy Swiss-Prot
Match: DLDH1_ARATH (Dihydrolipoyl dehydrogenase 1, mitochondrial OS=Arabidopsis thaliana GN=LPD1 PE=1 SV=2)

HSP 1 Score: 394.045 bits (1011), Expect = 4.753e-109
Identity = 193/216 (89.35%), Postives = 209/216 (96.76%), Query Frame = -3
Query:  136 LEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDKPIHI 783
            +EPA GGE++ILEADVVLVSAGRTPFT+GL L+KIGVETDK GRI VN+RF +N+PGVYAIGDVIPGPMLAHKAEEDGVACVEF+AGKHGHVDYDKVPGVVYTHPEVASVGKTEEQ+K+ GV YRVGKFPF+ANSRAKAID+AEG+VKILA+KETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMAT+DKPIHI
Sbjct:  292 VEPAEGGEQSILEADVVLVSAGRTPFTSGLDLEKIGVETDKAGRILVNDRFLSNVPGVYAIGDVIPGPMLAHKAEEDGVACVEFIAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQLKKEGVSYRVGKFPFMANSRAKAIDNAEGLVKILADKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATYDKPIHI 507          
BLAST of CF832401 vs. ExPASy Swiss-Prot
Match: DLDH_PEA (Dihydrolipoyl dehydrogenase, mitochondrial OS=Pisum sativum GN=LPD PE=1 SV=2)

HSP 1 Score: 391.349 bits (1004), Expect = 3.081e-108
Identity = 191/216 (88.43%), Postives = 209/216 (96.76%), Query Frame = -3
Query:  136 LEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDKPIHI 783
            +EP+AGGE+TI+EADVVLVSAGRTPFT+GL LDKIGVETDK+GRI VNERF+TN+ GVYAIGDVIPGPMLAHKAEEDGVACVE+LAGK GHVDYDKVPGVVYT+PEVASVGKTEEQVKE GVEYRVGKFPF+ANSRAKAID+AEG+VKI+AEKETDKILGVHIMAPNAGELIHEA +A+ YDASSEDIARVCHAHPTMSEA+KEAAMAT+DKPIHI
Sbjct:  286 VEPSAGGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVETDKLGRILVNERFSTNVSGVYAIGDVIPGPMLAHKAEEDGVACVEYLAGKVGHVDYDKVPGVVYTNPEVASVGKTEEQVKETGVEYRVGKFPFMANSRAKAIDNAEGLVKIIAEKETDKILGVHIMAPNAGELIHEAAIALQYDASSEDIARVCHAHPTMSEAIKEAAMATYDKPIHI 501          
BLAST of CF832401 vs. ExPASy Swiss-Prot
Match: DLDH2_ARATH (Dihydrolipoyl dehydrogenase 2, mitochondrial OS=Arabidopsis thaliana GN=LPD2 PE=1 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 2.884e-106
Identity = 189/216 (87.50%), Postives = 206/216 (95.37%), Query Frame = -3
Query:  136 LEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDKPIHI 783
            +EPA GGE+T LEADVVLVSAGRTPFT+GL L+KIGVETDK GRI VNERF+TN+ GVYAIGDVIPGPMLAHKAEEDGVACVEF+AGKHGHVDYDKVPGVVYT+PEVASVGKTEEQ+K+ GV Y VGKFPF+ANSRAKAID AEG+VKILA+KETDKILGVHIM+PNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEA+KEAAMAT+DKPIH+
Sbjct:  292 VEPAEGGEQTTLEADVVLVSAGRTPFTSGLDLEKIGVETDKGGRILVNERFSTNVSGVYAIGDVIPGPMLAHKAEEDGVACVEFIAGKHGHVDYDKVPGVVYTYPEVASVGKTEEQLKKEGVSYNVGKFPFMANSRAKAIDTAEGMVKILADKETDKILGVHIMSPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEAIKEAAMATYDKPIHM 507          
BLAST of CF832401 vs. ExPASy Swiss-Prot
Match: DLDH_CRIGR (Dihydrolipoyl dehydrogenase, mitochondrial OS=Cricetulus griseus GN=DLD PE=2 SV=1)

HSP 1 Score: 280.026 bits (715), Expect = 1.000e-74
Identity = 132/216 (61.11%), Postives = 170/216 (78.70%), Query Frame = -3
Query:  139 LEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAM-ATHDKPIH 783
            +E A+GG+  ++  DV+LV  GR PFT  LGL+++G+E D  GRIPVN RF T IP +YAIGDV+ GPMLAHKAE++G+ CVE +AG   H+DY+ VP V+YTHPEVA VGK+EEQ+KE G+EY+VGKFPF ANSRAK   D +G+VKIL +K TD++LG HI+ P AGE+++EA LA+ Y AS EDIARVCHAHPT+SEA +EA + A+  KPI+
Sbjct:  293 VEAASGGKAEVITCDVLLVCIGRRPFTQNLGLEELGIELDPRGRIPVNTRFQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAGGAVHIDYNCVPSVIYTHPEVAWVGKSEEQLKEEGIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAFREANLAASFGKPIN 508          
BLAST of CF832401 vs. ExPASy Swiss-Prot
Match: DLDH_PIG (Dihydrolipoyl dehydrogenase, mitochondrial OS=Sus scrofa GN=DLD PE=1 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 2.228e-74
Identity = 130/208 (62.50%), Postives = 165/208 (79.33%), Query Frame = -3
Query:  160 LEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMA 783
            +E A+GG+  ++  DV+LV  GR PFT  LGL+++G+E D  GRIPVN RF T IP +YAIGDV+ GPMLAHKAE++G+ CVE +AG   H+DY+ VP V+YTHPEVA VGK+EEQ+KE G+EY+VGKFPF ANSRAK   D +G+VKIL +K TD++LG HI+ P AGE+I+EA LA+ Y AS EDIARVCHAHPT+SEA +EA +A
Sbjct:  293 IEAASGGKAEVITCDVLLVCIGRRPFTQNLGLEELGIELDPRGRIPVNTRFQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAGGAVHIDYNCVPSVIYTHPEVAWVGKSEEQLKEEGIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHIIGPGAGEMINEAALALEYGASCEDIARVCHAHPTLSEAFREANLA 500          
BLAST of CF832401 vs. ExPASy Swiss-Prot
Match: DLDH_MACFA (Dihydrolipoyl dehydrogenase, mitochondrial OS=Macaca fascicularis GN=DLD PE=2 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 2.228e-74
Identity = 129/208 (62.02%), Postives = 165/208 (79.33%), Query Frame = -3
Query:  160 LEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMA 783
            +E A+GG+  ++  DV+LV  GR PFT  LGL+++G+E D  GRIPVN RF T IP +YAIGDV+ GPMLAHKAE++G+ CVE +AG   H+DY+ VP V+YTHPEVA VGK+EEQ+KE G+EY+VGKFPF ANSRAK   D +G+VKIL +K TD++LG HI+ P AGE+++EA LA+ Y AS EDIARVCHAHPT+SEA +EA +A
Sbjct:  293 IEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAGGAVHIDYNCVPSVIYTHPEVAWVGKSEEQLKEEGIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAFREANLA 500          
BLAST of CF832401 vs. ExPASy Swiss-Prot
Match: DLDH_HUMAN (Dihydrolipoyl dehydrogenase, mitochondrial OS=Homo sapiens GN=DLD PE=1 SV=2)

HSP 1 Score: 278.87 bits (712), Expect = 2.228e-74
Identity = 129/208 (62.02%), Postives = 165/208 (79.33%), Query Frame = -3
Query:  160 LEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMA 783
            +E A+GG+  ++  DV+LV  GR PFT  LGL+++G+E D  GRIPVN RF T IP +YAIGDV+ GPMLAHKAE++G+ CVE +AG   H+DY+ VP V+YTHPEVA VGK+EEQ+KE G+EY+VGKFPF ANSRAK   D +G+VKIL +K TD++LG HI+ P AGE+++EA LA+ Y AS EDIARVCHAHPT+SEA +EA +A
Sbjct:  293 IEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAGGAVHIDYNCVPSVIYTHPEVAWVGKSEEQLKEEGIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAFREANLA 500          
BLAST of CF832401 vs. ExPASy Swiss-Prot
Match: DLDH_MOUSE (Dihydrolipoyl dehydrogenase, mitochondrial OS=Mus musculus GN=Dld PE=1 SV=2)

HSP 1 Score: 277.33 bits (708), Expect = 6.484e-74
Identity = 130/216 (60.19%), Postives = 168/216 (77.78%), Query Frame = -3
Query:  139 LEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAM-ATHDKPIH 783
            +E A+GG+  ++  DV+LV  GR PFT  LGL+++G+E D  GRIPVN RF T IP +YAIGDV+ GPMLAHKAE++G+ CVE +AG   H+DY+ VP V+YTHPEVA VGK+EEQ+KE G+E+++GKFPF ANSRAK   D +G+VKIL  K TD++LG HI+ P AGE+++EA LA+ Y AS EDIARVCHAHPT+SEA +EA + A   KPI+
Sbjct:  293 VEAASGGKAEVITCDVLLVCIGRRPFTQNLGLEELGIELDPKGRIPVNNRFQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAGGAVHIDYNCVPSVIYTHPEVAWVGKSEEQLKEEGIEFKIGKFPFAANSRAKTNADTDGMVKILGHKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAFREANLAAAFGKPIN 508          
BLAST of CF832401 vs. ExPASy Swiss-Prot
Match: DLDH_RAT (Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Dld PE=1 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 1.106e-73
Identity = 131/216 (60.65%), Postives = 169/216 (78.24%), Query Frame = -3
Query:  139 LEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAM-ATHDKPIH 783
            +E A+GG+  ++  DV+LV  GR PFT  LGL+++G+E D  GRIPVN RF T IP ++AIGDV+ GPMLAHKAE++G+ CVE +AG   H+DY+ VP V+YTHPEVA VGK+EEQ+KE GVE++VGKFPF ANSRAK   D +G+VKIL  K TD+ILG HI+ P AGE+++EA LA+ Y AS ED+ARVCHAHPT+SEA +EA + A+  KPI+
Sbjct:  293 VEAASGGKAEVITCDVLLVCIGRRPFTQNLGLEELGIELDPKGRIPVNTRFQTKIPNIFAIGDVVAGPMLAHKAEDEGIICVEGMAGGAVHIDYNCVPSVIYTHPEVAWVGKSEEQLKEEGVEFKVGKFPFAANSRAKTNADTDGMVKILGHKSTDRILGAHILGPGAGEMVNEAALALEYGASCEDVARVCHAHPTLSEAFREANLAASFGKPIN 508          
BLAST of CF832401 vs. ExPASy Swiss-Prot
Match: DLDH_PONAB (Dihydrolipoyl dehydrogenase, mitochondrial OS=Pongo abelii GN=DLD PE=2 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 1.444e-73
Identity = 128/208 (61.54%), Postives = 164/208 (78.85%), Query Frame = -3
Query:  160 LEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMA 783
            +E A+GG+  ++  DV+LV  GR PFT  LGL+++G+E D  GRIPVN RF T IP +YAIGDV+ GPMLAHKAE++G+ CVE +AG   H+DY+ VP V+YTHPEVA VGK+EEQ+KE G+EY+VGKFPF ANSRAK   D +G+VKIL +K TD++LG HI+ P AG +++EA LA+ Y AS EDIARVCHAHPT+SEA +EA +A
Sbjct:  293 IEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAGGAVHIDYNCVPSVIYTHPEVAWVGKSEEQLKEEGIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILGPGAGGMVNEAALALEYGASCEDIARVCHAHPTLSEAFREANLA 500          
The following BLAST results are available for this feature:
BLAST of CF832401 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 226
Match NameE-valueIdentityDescription
DLDH1_ARATH4.753e-10989.35Dihydrolipoyl dehydrogenase 1, mitochondrial OS=Ar... [more]
DLDH_PEA3.081e-10888.43Dihydrolipoyl dehydrogenase, mitochondrial OS=Pisu... [more]
DLDH2_ARATH2.884e-10687.50Dihydrolipoyl dehydrogenase 2, mitochondrial OS=Ar... [more]
DLDH_CRIGR1.000e-7461.11Dihydrolipoyl dehydrogenase, mitochondrial OS=Cric... [more]
DLDH_PIG2.228e-7462.50Dihydrolipoyl dehydrogenase, mitochondrial OS=Sus ... [more]
DLDH_MACFA2.228e-7462.02Dihydrolipoyl dehydrogenase, mitochondrial OS=Maca... [more]
DLDH_HUMAN2.228e-7462.02Dihydrolipoyl dehydrogenase, mitochondrial OS=Homo... [more]
DLDH_MOUSE6.484e-7460.19Dihydrolipoyl dehydrogenase, mitochondrial OS=Mus ... [more]
DLDH_RAT1.106e-7360.65Dihydrolipoyl dehydrogenase, mitochondrial OS=Ratt... [more]
DLDH_PONAB1.444e-7361.54Dihydrolipoyl dehydrogenase, mitochondrial OS=Pong... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01M21_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01M21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832401 ID=CF832401; Name=CF832401; organism=Citrus sinensis; type=EST; length=785bp
TTTTTTTTGAGCAATACAAATTTCTATTAAAGCATCTGCTTCAAAGCTGG
ACAATTGAGAAAACAGAAGAACGTCTTTTTCAAGATATCTGAAAAATCTC
AAACAAAAAATAACAAAGTAATAACCCGCTTCTCAGATGTGAATGGGTTT
GTCGTGAGTGGCCATAGCAGCCTCCTTCAATGCCTCACTCATTGTAGGAT
GTGCATGGCACACACGTGCAATGTCCTCACTTGATGCATCATAATTAATG
GCCAGGACAGCCTCGTGGATGAGCTCTCCAGCATTGGGTGCCATAATATG
AACCCCCAATATCTTGTCTGTCTCTTTCTCAGCCAAAATCTTGACTATTC
CTTCAGCATCATCAATAGCTTTTGCTCGGCTATTTGCCAAGAAAGGGAAT
TTCCCCACACGGTACTCAACACCAAGTTCCTTTACCTGCTCCTCAGTCTT
CCCAACTGAAGCAACCTCAGGGTGTGTGTAGACAACTCCAGGGACCTTAT
CATAGTCCACATGGCCATGTTTACCAGCTAAGAATTCAACACAAGCAACC
CCATCCTCTTCTGCCTTGTGAGCTAACATTGGTCCTGGAATTACGTCTCC
AATCGCATAAACACCAGGTATGTTTGTAGCAAATCTCTCATTAACTGGTA
TCCGTCCCATCTTATCGGTTTCCACTCCTATCTTATCCAGCCCGAGCCCA
GCGGTGAATGGAGTCCGGCCAGCAGACACAAGAACAACATCAGCTTCAAG
TATGGTCTTTTCACCACCAGCTGCTGGTTCAAGGG
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