CF832454
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832454 vs. ExPASy Swiss-Prot
Match: CLH1_CITUN (Chlorophyllase-1, chloroplastic OS=Citrus unshiu PE=2 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 1.495e-58 Identity = 111/197 (56.35%), Postives = 135/197 (68.53%), Query Frame = 2 Query: 2 ENVEANLNYVALMGHSRGGLIAFGLALGYATNPPVSIKISALVGIDPVAGLASVHSELEPPILSHDSFEFSIPXXXXXXXXXXXXKCMQPCAPENKNHEQFFKRCTYSDHAHFDAKDYGHMDILDDNPQGPKNWAISKFLCTNGKKPRDPMRRCVAGIAAAFLKAYFDGDCEDFRTMLKDPSLAPIELDEVEFIPAA 592 EN EAN++ VA+MGHSRGG AF L+L Y A++G+DPVAG + + L+P ILS DSF+FSIP +C+ CAPE NHE+FF RC S AHF A DYGHMDILDDNP K+WA+SK+ C NG + RDPMRRCV+GI AFLK +FDGD EDFR +LKDPS API+LD VE+I A+ Sbjct: 132 ENTEANVSLVAVMGHSRGGQTAFALSLRYG--------FGAVIGLDPVAGTSKT-TGLDPSILSFDSFDFSIPVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHMDILDDNPSDVKSWALSKYFCKNGNESRDPMRRCVSGIVVAFLKDFFDGDAEDFRQILKDPSFAPIKLDSVEYIDAS 319
BLAST of CF832454 vs. ExPASy Swiss-Prot
Match: CLH1_CITSI (Chlorophyllase-1, chloroplastic OS=Citrus sinensis GN=CHLASE1 PE=1 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.653e-57 Identity = 110/197 (55.84%), Postives = 134/197 (68.02%), Query Frame = 2 Query: 2 ENVEANLNYVALMGHSRGGLIAFGLALGYATNPPVSIKISALVGIDPVAGLASVHSELEPPILSHDSFEFSIPXXXXXXXXXXXXKCMQPCAPENKNHEQFFKRCTYSDHAHFDAKDYGHMDILDDNPQGPKNWAISKFLCTNGKKPRDPMRRCVAGIAAAFLKAYFDGDCEDFRTMLKDPSLAPIELDEVEFIPAA 592 EN EAN++ VA+MGHSRGG AF L+L Y A++G+DPVAG + + L+P ILS DSF+FSIP +C+ CAPE NHE+FF RC S AHF A DYGHMDILDDNP K+WA+SK+ C NG + RDPMRRCV+GI AFLK +F GD EDFR +LKDPS API+LD VE+I A+ Sbjct: 132 ENTEANVSLVAVMGHSRGGQTAFALSLRYG--------FGAVIGLDPVAGTSKT-TGLDPSILSFDSFDFSIPVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHMDILDDNPSDVKSWALSKYFCKNGNESRDPMRRCVSGIVVAFLKDFFYGDAEDFRQILKDPSFAPIKLDSVEYIDAS 319
BLAST of CF832454 vs. ExPASy Swiss-Prot
Match: CLH1_ARATH (Chlorophyllase-1 OS=Arabidopsis thaliana GN=CLH1 PE=1 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.664e-33 Identity = 83/191 (43.46%), Postives = 115/191 (60.21%), Query Frame = 2 Query: 5 NVEANLNYVALMGHSRGGLIAFGLALGYATNPPVSIKISALVGIDPVAGLASVHSELEPPILSH--DSFEFSIP-XXXXXXXXXXXXKCMQPCAPENKNHEQFFKRCTYSDHAHFDAKDYGHMDILDDNPQGPKNWAISKFLCTNGKKPRDPMRRCVAGIAAAFLKAYFDGDCEDFRTMLKDPSLAPIELD 568 +V AN Y +L+GHSRGG AF +ALG+A SI SAL+GIDPVAG + + +P IL++ +SFE IP M PCAP + NHE+F+K C + AHF A DYGHMD+LDD+ G + ++ +C NG++ + MR V GI AFLK G+ + R ++KDPS++P +LD Sbjct: 124 SVNANGKYTSLVGHSRGGKTAFAVALGHAATLDPSITFSALIGIDPVAG-TNKYIRTDPHILTYKPESFELDIPVAVVGTGLGPKWNNVMPPCAPTDLNHEEFYKECK-ATKAHFVAADYGHMDMLDDDLPGFVGF-MAGCMCKNGQRKKSEMRSFVGGIVVAFLKYSLWGEKAEIRLIVKDPSVSPAKLD 311
BLAST of CF832454 vs. ExPASy Swiss-Prot
Match: CLH2_ARATH (Chlorophyllase-2, chloroplastic OS=Arabidopsis thaliana GN=CLH2 PE=1 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.155e-26 Identity = 82/202 (40.59%), Postives = 111/202 (54.95%), Query Frame = 2 Query: 8 VEANLNYVALMGHSRGGLIAFGLAL---GYATNPPVSIKISALVGIDPVAGLASVHSELEPPILSH--DSFEFS---IPXXXXXXXXXXXXKCMQPCAPENKNHEQFFKRCTYSDHAHFDAKDYGHMDILDDNPQGPKNWAISKFLCTNGKKPRDPMRRCVAGIAAAFLKAYFDGDCEDFRTMLKD--PSLAPIELDEVEFI 583 V NL+ AL GHSRGG AF +AL GY++N +KIS L+GIDPV G + PP+L++ +SF+ I PCAP NH +FF+ C HF AKDYGH+D+LDD+ +G + + S LC NG++ R PMRR V G+ +FLKAY +GD + +KD P+E+ E E I Sbjct: 125 VTPNLSKFALSGHSRGGKTAFAVALKKFGYSSN----LKISTLIGIDPVDGTGK-GKQTPPPVLAYLPNSFDLDKTPILVIGSGLGETARNPLFPPCAPPGVNHREFFRECQ-GPAWHFVAKDYGHLDMLDDDTKGIRGKS-SYCLCKNGEE-RRPMRRFVGGLVVSFLKAYLEGDDREL-VKIKDGCHEDVPVEIQEFEVI 317
BLAST of CF832454 vs. ExPASy Swiss-Prot
Match: CLH0_CHEAL (Chlorophyllase type 0 OS=Chenopodium album GN=CACLH PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.409e-24 Identity = 71/188 (37.77%), Postives = 102/188 (54.26%), Query Frame = 2 Query: 8 VEANLNYVALMGHSRGGLIAFGLALGYATNPPVSIKISALVGIDPVAGLASVHSELEPPILSH--DSFEFSIPXXXXXXXXXXXXKCMQPCAPENKNHEQFFKRCTYSDHAHFDAKDYGHMDILDDNPQGPKNWAISKFLCTNGKKPRDPMRRCVAGIAAAFLKAYFDGDCEDFRTMLKDPSLAPIEL 565 VE +L +A+ GHSRGG AF LALG++ N + + SAL+G+DPVAG SV P +L++ +SF SIP CAP + +H+QF+ C + +HF YGHMD+L++ P +S +C +P+ MRR + GI AFL AYF D + ++ + SLAP L Sbjct: 149 VEGDLEKLAISGHSRGGKSAFALALGFS-NIKLDVTFSALIGVDPVAG-RSVDDRTLPHVLTYKPNSFNLSIPVTVIGSGLGNHTIS---CAPNHVSHQQFYDECK-ENSSHFVITKYGHMDMLNEFRLSPIAVTMS-LMCAQSFRPKATMRRTLGGIMVAFLNAYFRDDGRQYYAIIANRSLAPTNL 329 The following BLAST results are available for this feature:
BLAST of CF832454 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF832454 ID=CF832454; Name=CF832454; organism=Citrus sinensis; type=EST; length=851bpback to top |