CF832456

Overview
NameCF832456
Unique NameCF832456
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length797
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9906 contig Csv1_Contig9906:101..897. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832456 vs. ExPASy Swiss-Prot
Match: COMT1_POPKI (Caffeic acid 3-O-methyltransferase 1 OS=Populus kitakamiensis GN=HOMT1 PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.444e-52
Identity = 112/233 (48.07%), Postives = 150/233 (64.38%), Query Frame = 3
Query:  114 MGSFTKSKSKVTN-EEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFST----HGVRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXFKYPHIKGINFDV 797
            MGS  +++   T   +EE +  AM L SA VLP + +  + LD+L+I+ KAGPGA LS SEIAS +PTKNP+ A  MLDR+L LL S++IL CS          RLY LAPV K+   +++GVS+ P   ++ DKV+M  W+ LKD ILEG + +NKA GM  ++Y GTD RFN+VFN GM   ++  + KI+E+YKGF+ +T LVDV             KYP IKGINFD+
Sbjct:    1 MGSTGETQMTPTQVSDEEAHLFAMQLASASVLPMILKTAIELDLLEIMAKAGPGAFLSTSEIASHLPTKNPD-APVMLDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDL 232          
BLAST of CF832456 vs. ExPASy Swiss-Prot
Match: COMT1_POPTM (Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.217e-52
Identity = 111/233 (47.64%), Postives = 150/233 (64.38%), Query Frame = 3
Query:  114 MGSFTKSKSKVTN-EEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFST----HGVRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXFKYPHIKGINFDV 797
            MGS  +++   T   +EE +  AM L SA VLP + +  + LD+L+I+ KAGPGA LS SEIAS +PTKNP+ A  MLDR+L LL S++IL CS          RLY LAPV K+   +++GVS+ P   ++ DKV+M  W+ LKD IL+G + +NKA GM  ++Y GTD RFN+VFN GM   ++  + KI+E+YKGF+ +T LVDV             KYP IKGINFD+
Sbjct:    1 MGSTGETQMTPTQVSDEEAHLFAMQLASASVLPMILKTAIELDLLEIMAKAGPGAFLSTSEIASHLPTKNPD-APVMLDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDL 232          
BLAST of CF832456 vs. ExPASy Swiss-Prot
Match: COMT1_CATRO (Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.222e-51
Identity = 105/226 (46.46%), Postives = 151/226 (66.81%), Query Frame = 3
Query:  132 SKSKVTNEEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFST---HGV-RLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXFKYPHIKGINFDV 797
            +K+ +T EEEE    AM L SA VLP V ++ + LD+L++I K+GPGA +S SE+A+Q+PT+NP+ A  MLDR+L LL S+++L C+       G+ RLYSLAPV K+   +++GVSM   + ++ DKV+M  W+ LKD +LEG + +NKA GM  ++Y G D RFN+VFN GM   ++ ++ KI+E Y+GFQ +  +VDV             KYP IKGINFD+
Sbjct:    8 NKNSMTKEEEEACLSAMRLASASVLPMVLKSAIELDLLELIKKSGPGAYVSPSELAAQLPTQNPD-APVMLDRILRLLASYSVLNCTLKDLPDGGIERLYSLAPVCKFLTKNEDGVSMAALLLMNQDKVLMESWYHLKDAVLEGGIPFNKAYGMTAFEYHGKDPRFNKVFNQGMSNHSTIIMKKILEIYQGFQGLKTVVDVGGGTGATLNMIVSKYPSIKGINFDL 232          
BLAST of CF832456 vs. ExPASy Swiss-Prot
Match: COMT1_CAPAN (Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2)

HSP 1 Score: 199.904 bits (507), Expect = 1.352e-50
Identity = 103/226 (45.58%), Postives = 146/226 (64.60%), Query Frame = 3
Query:  132 SKSKVTNEEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFST----HGVRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXFKYPHIKGINFDV 797
            +   +T  E+E +  AM L SA VLP V ++ + LD+L+I+ KAGPGA +S SE+A+Q+PTKNPE A  MLDR+L LL ++++L C+  T       RLYSLAPV K    + +GVS+ P + ++ DKV+M  W+ L D +L+G + +NKA GM  ++Y GTD RFN+VFN GM   ++  + KI+E YKGF+ +  +VDV             KYP IKGINFD+
Sbjct:    4 TNQNLTQTEDEAFLFAMQLASASVLPMVLKSALELDLLEIMAKAGPGAAISPSELAAQLPTKNPE-APVMLDRMLRLLATYSVLNCTLRTLPDGRVERLYSLAPVCKLLTKNADGVSVAPLLLMNQDKVLMESWYHLTDAVLDGGVPFNKAYGMTAFEYHGTDPRFNKVFNRGMSDHSTMTMKKILEDYKGFEGLNSIVDVGGGTGATVNMIVSKYPSIKGINFDL 228          
BLAST of CF832456 vs. ExPASy Swiss-Prot
Match: COMT1_CAPCH (Caffeic acid 3-O-methyltransferase OS=Capsicum chinense GN=COMT PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.306e-50
Identity = 107/232 (46.12%), Postives = 149/232 (64.22%), Query Frame = 3
Query:  114 MGSFTKSKSKVTNEEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFST----HGVRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXFKYPHIKGINFDV 797
            MGS  +S   +T  E+E +  AM L SA VLP V +A V LD+L+I+ K+GPGA +S SE+A+Q+PTKNPE A  MLDR+  LL ++++L C+  T       RLYSLAPV K+   + +GVS+ P + ++ DKV+M  W+ L D +L+G + +NKA GM  ++Y GTD RFN+VFN GM   T+  + KI+E Y GF+ +  +VDV             KYP IKGINFD+
Sbjct:    1 MGSINQS---LTQTEDEAFVFAMQLASASVLPMVLKATVELDLLEIMAKSGPGAFISPSELAAQLPTKNPE-APVMLDRMFRLLATYSVLNCTLRTLPDGRVERLYSLAPVCKFLTKNGDGVSIAPILLMNQDKVLMESWYHLTDAVLDGGVPFNKAYGMTTFEYHGTDPRFNKVFNCGMSDHTTLSMKKILEDYTGFEGLNSIVDVGGGTGATVNMIVSKYPSIKGINFDL 228          
BLAST of CF832456 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 5.136e-50
Identity = 106/231 (45.89%), Postives = 149/231 (64.50%), Query Frame = 3
Query:  117 GSFTKSKSKVTNEEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFSTHG----VRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXFKYPHIKGINFDV 797
            G    + ++V++EE  ++  AM L SA VLP V +A + LD+L+I+ KAGPG  LS ++IASQ+PTKNP+ A  MLDR+L LL S++IL  S  T       RLY L PV K+   ++ GVS+ P   ++ DKV++  W+ LKD +LEG + +NKA GM  ++Y GTD RFN+VFN GM   ++  + KI+E+YKGF+ +T +VDV             KYP IKGINFD+
Sbjct:    5 GETQMTPTQVSDEEANLF--AMQLASASVLPMVLKAAIELDLLEIMAKAGPGVFLSPTDIASQLPTKNPD-APVMLDRMLRLLASYSILTYSLRTLADGKVERLYGLGPVCKFLTKNEEGVSIAPLCLMNQDKVLLESWYHLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNKVFNRGMADHSTITMKKILETYKGFEGLTSVVDVGGGTGAVLNMIVSKYPSIKGINFDL 232          
BLAST of CF832456 vs. ExPASy Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 8.761e-50
Identity = 106/231 (45.89%), Postives = 150/231 (64.94%), Query Frame = 3
Query:  117 GSFTKSKSKVTNEEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFST----HGVRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXFKYPHIKGINFDV 797
            G    + ++V++EE  ++  AM L SA VLP V +A + LD+L+I+ KAGPGA LS +++ASQ+PTKNPE A  MLDR+L LL S++IL  S  T       RLY L PV K+   +++GVS+     ++ DKV++  W+ LKD +L+G + +NKA GM  +DY GTD RFN+VFN GM   ++  + KI+E+YKGF+ +T +VDV             KYP IKGINFD+
Sbjct:    5 GETQMTPTQVSDEEANLF--AMQLASASVLPMVLKAAIELDLLEIMAKAGPGAFLSPNDLASQLPTKNPE-APVMLDRMLRLLASYSILTYSLRTLPDGKVERLYGLGPVCKFLTKNEDGVSIAALCLMNQDKVLVESWYHLKDAVLDGGIPFNKAYGMTAFDYHGTDPRFNKVFNKGMADHSTITMKKILETYKGFEGLTSIVDVGGGTGAVVNMIVSKYPSIKGINFDL 232          
BLAST of CF832456 vs. ExPASy Swiss-Prot
Match: COMT3_POPKI (Caffeic acid 3-O-methyltransferase 3 OS=Populus kitakamiensis GN=HOMT3 PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.952e-49
Identity = 108/232 (46.55%), Postives = 145/232 (62.50%), Query Frame = 3
Query:  114 MGSFTKSKSKVTNEEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFST----HGVRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXFKYPHIKGINFDV 797
            MGS  +++       +E  + AM L S+ VLP V +  + LD+L+I+ KAGPGA LS S+IAS +PTKNP+ A  MLDR+L LL S++IL CS          RLY LA V K+   +++GVS+ P   ++ DKV+M  W+ LKD ILEG + +NKA GM  ++Y GTD RFN+VFN GM   +   + KI+ESYKGF+ +  LVDV             KYP IKGINFD+
Sbjct:    1 MGSTGETQMSPAQILDEEANFAMQLISSSVLPMVLKTAIELDLLEIMAKAGPGALLSPSDIASHLPTKNPD-APVMLDRILRLLASYSILICSLRDLPDGKVERLYGLASVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSKMAMKKILESYKGFEGLASLVDVGGGTGAVVSTIVSKYPSIKGINFDL 231          
BLAST of CF832456 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 5.679e-49
Identity = 102/218 (46.79%), Postives = 143/218 (65.60%), Query Frame = 3
Query:  156 EEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFST---HGV-RLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXFKYPHIKGINFDV 797
            EEE    AM L SA VLP V ++ + LD+L++I KAGPGA +S SE+A+Q+PT NPE A  MLDR+L LL ++++L C  +     GV RLY LAPV K+   + +GVSM P + ++ DKV+M  W+ LKD +L+G + +NKA GM  ++Y GTD RFN+VFN GM   ++  + KI+E Y+GF+ +  +VDV             KYP IKGINF++
Sbjct:    3 EEEACLFAMSLASASVLPMVLKSAIELDLLELIAKAGPGAYVSPSELAAQLPTHNPE-APIMLDRILRLLATYSVLDCKLNNLADGGVERLYGLAPVCKFLTKNADGVSMAPLLLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILEVYRGFEGLKTVVDVGGGTGATLNMIISKYPTIKGINFEL 219          
BLAST of CF832456 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGU (Caffeic acid 3-O-methyltransferase OS=Eucalyptus gunnii GN=OMT PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 7.417e-49
Identity = 105/235 (44.68%), Postives = 151/235 (64.26%), Query Frame = 3
Query:  114 MGSFTKSKSKVTN---EEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFST----HGVRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXFKYPHIKGINFDV 797
            MGS T S++++T     +EE    AM L SA VLP V +A + LD+L+I+ KAGPGA LS  E+A+Q+PT+NPE A  MLDR+  LL S+++L C+          RLY LAPV K+ V +++GVS+     ++ DK++M  W+ LKD +LEG + +NKA GM  ++Y GTD RFN++FN GM   ++  + KI+E+YKGF+ +  +VDV             KYP +KGINFD+
Sbjct:    1 MGS-TGSETQMTPTQVSDEEANLFAMQLASASVLPMVLKAAIELDLLEIMAKAGPGAFLSPGEVAAQLPTQNPE-APVMLDRIFRLLASYSVLTCTLRNLPDGKVERLYGLAPVCKFLVKNEDGVSIAALNLMNQDKILMESWYYLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNKIFNRGMSDHSTITMKKILETYKGFEGLETVVDVGGGTGAVLSMIVAKYPSMKGINFDL 233          
The following BLAST results are available for this feature:
BLAST of CF832456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
COMT1_POPKI1.444e-5248.07Caffeic acid 3-O-methyltransferase 1 OS=Populus ki... [more]
COMT1_POPTM3.217e-5247.64Caffeic acid 3-O-methyltransferase 1 OS=Populus tr... [more]
COMT1_CATRO1.222e-5146.46Caffeic acid 3-O-methyltransferase OS=Catharanthus... [more]
COMT1_CAPAN1.352e-5045.58Caffeic acid 3-O-methyltransferase OS=Capsicum ann... [more]
COMT1_CAPCH2.306e-5046.12Caffeic acid 3-O-methyltransferase OS=Capsicum chi... [more]
COMT1_PRUDU5.136e-5045.89Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]
COMT1_ROSCH8.761e-5045.89Caffeic acid 3-O-methyltransferase OS=Rosa chinens... [more]
COMT3_POPKI1.952e-4946.55Caffeic acid 3-O-methyltransferase 3 OS=Populus ki... [more]
COMT1_COFCA5.679e-4946.79Caffeic acid 3-O-methyltransferase OS=Coffea canep... [more]
COMT1_EUCGU7.417e-4944.68Caffeic acid 3-O-methyltransferase OS=Eucalyptus g... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01O06_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01O06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832456 ID=CF832456; Name=CF832456; organism=Citrus sinensis; type=EST; length=797bp
GAGCGCTCGAAAGTAAAGACAGCATAAACACAGCATAAGAGTAGTGGTAT
AAAAGATTCAAAAACACTAAGCTAAGAGCAAAGCAAAGCAGGAGCAAGAA
ATTAAACGCGCAAATGGGTTCTTTCACTAAGAGCAAATCAAAAGTGACCA
ATGAAGAGGAAGAGGTATATTCACATGCCATGGTACTGGGAAGTGCAATA
GTGCTACCCGCGGTTTTTCAAGCAGTAGTAAATCTTGATGTTCTTGATAT
CATAAACAAAGCTGGTCCTGGTGCTGAGCTTTCTGCTTCAGAGATTGCTT
CTCAAATTCCCACCAAAAATCCTGAGGGTGCTGCCAAGATGTTGGATCGG
GTTCTCGGGCTTCTGGTGAGCTTCAATATCCTTTGTTGCTCTTTCAGTAC
TCATGGAGTAAGGCTCTACAGTCTCGCTCCTGTCGCTAAATACTATGTGA
GTGATCAAAACGGCGTCTCAATGCGTCCCTATATGAACTTGTCTCTTGAC
AAAGTAATGATGCCTGGCTGGTTCCAATTGAAAGACCAAATTCTTGAAGG
AGAACTTTCGTATAATAAAGCCCTCGGAATGGATTTCTACGATTATCTGG
GCACCGACTCCAGGTTCAATGAAGTTTTCAACAATGGAATGATCGGCCAG
ACTTCTTTTGTAATCAATAAGATTGTAGAATCCTACAAAGGCTTTCAGAA
TATTACGCGCCTTGTTGACGTTGGCGGTGGTTTAGGAATCACCCTTGCGA
CCATAATTTTCAAATACCCTCATATTAAGGGTATTAATTTTGACGTA
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