CF832467

Overview
NameCF832467
Unique NameCF832467
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length801
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12113 contig Csv1_Contig12113:188..986. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832467 vs. ExPASy Swiss-Prot
Match: PT3K1_SOLTU (Patatin-3-Kuras 1 OS=Solanum tuberosum GN=pat3-k1 PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.254e-36
Identity = 91/214 (42.52%), Postives = 133/214 (62.15%), Query Frame = -2
Query:  162 CISTFAAPTYLPPHYLETKDSDSGGTRTFDLVDGGVAANNPTLLAISHISKEMVKQNPQFRDKNPMDGRDMLVLSLGTGTAKKELK-YNAAKASKWGIFEWIYEDGNTPILDIYSDGGSDIVDFHMSALFQSCGSKDNYLRIQDDTLSGDAASADIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKLR 800
            C ST AAPTY PPHY  T  S+ G    F+LVDG VAA +P+LL+IS ++  + +++P F     ++ + ML+LSLGTGT  +  K Y A +A+KWGI +W+     +P+ ++ S   S + D+++S +FQ+  S++NYLR+Q++ L+G A + D A+  NM  LV+ G  LLK+ VS  N E           T E AL  FAKLLS++ KLR
Sbjct:  173 CYSTAAAPTYFPPHYFATNTSN-GDQYDFNLVDGDVAAVDPSLLSIS-VATRLAQEDPAFASIKSLNYKQMLLLSLGTGTNSEFAKNYTAEEAAKWGILQWM-----SPLWEMRSAASSYMNDYYLSTVFQALDSQNNYLRVQENALTGTATTFDDASVANMILLVQVGENLLKKSVSEDNHE-----------TYEVALKRFAKLLSDRKKLR 368          
BLAST of CF832467 vs. ExPASy Swiss-Prot
Match: PT2K3_SOLTU (Patatin-2-Kuras 3 OS=Solanum tuberosum GN=pat2-k3 PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 6.784e-34
Identity = 88/215 (40.93%), Postives = 129/215 (60.00%), Query Frame = -2
Query:  162 CISTFAAPTYLPPHYLETKDSDSGGTRTFDLVDGGVAA-NNPTLLAISHISKEMVKQNPQFRDKNPMDGRDMLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDGNTPILDIYSDGGSDIVDFHMSALFQSCGSKDNYLRIQDDTLSGDAASADIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKLR 800
            C ST AAPTY PPHY  T  S+ G    F+LVDG VA   +P LL++S ++ ++ + +P+F     ++ + ML+LSLGTGT  + +  Y A +A+KWG   WI       I  + +   S + D+++S +FQ+  S++NYLR+Q++ L+G     D A+E NM+ LV+ G KLLK+ VS+           D   T EEAL  FAKLLS++ KLR
Sbjct:  184 CYSTAAAPTYFPPHYFVTHTSN-GDKYEFNLVDGAVATVGDPALLSLS-VATKLAQVDPKFASIKSLNYKQMLLLSLGTGTNSEFDKTYTAEEAAKWGPLRWILA-----IQQMTNAASSYMTDYYLSTVFQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGEKLLKKPVSK-----------DSPETYEEALKRFAKLLSDRKKLR 380          
BLAST of CF832467 vs. ExPASy Swiss-Prot
Match: PATT5_SOLTU (Patatin-T5 OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.157e-33
Identity = 88/215 (40.93%), Postives = 128/215 (59.53%), Query Frame = -2
Query:  162 CISTFAAPTYLPPHYLETKDSDSGGTRTFDLVDGGVAA-NNPTLLAISHISKEMVKQNPQFRDKNPMDGRDMLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDGNTPILDIYSDGGSDIVDFHMSALFQSCGSKDNYLRIQDDTLSGDAASADIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKLR 800
            C ST AAPT+ PPHY  T  S+ G    F+LVDG VA  ++P LL+IS ++ ++ + +P+F     ++ + ML+LSLGTGT  + +  Y A + +KWG   W+       I  + S   S + D+++S  FQ+  S++NYLR+Q++ L+G     D A+E NMQ LV+ G  LLK+ VS+ N E           T EEAL  FAKLLS++ KLR
Sbjct:  184 CYSTAAAPTFFPPHYFATNTSN-GDKYEFNLVDGAVATVDDPALLSIS-VATKLAQVDPKFASIKSLNYKQMLLLSLGTGTTSEFDKTYTAEETAKWGTARWMLV-----IQKMTSAASSYMTDYYLSTAFQALDSQNNYLRVQENALTGTTTELDDASEANMQLLVQVGEDLLKKSVSKDNPE-----------TYEEALKRFAKLLSDRKKLR 380          
BLAST of CF832467 vs. ExPASy Swiss-Prot
Match: PAT15_SOLTU (Patatin-15 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.157e-33
Identity = 87/215 (40.47%), Postives = 128/215 (59.53%), Query Frame = -2
Query:  162 CISTFAAPTYLPPHYLETKDSDSGGTRTFDLVDGGVAA-NNPTLLAISHISKEMVKQNPQFRDKNPMDGRDMLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDGNTPILDIYSDGGSDIVDFHMSALFQSCGSKDNYLRIQDDTLSGDAASADIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKLR 800
            C ST AAP Y PPH+  T  S+ G T  F+LVDGGVA   +P LL++S ++  + +++P F     +D + ML+LSLGTGT  + +  Y A +A+KWG   W+       I  + +   S + D+++S +FQ+  S++NYLR+Q++ L+G     D A+E NM+ LV+ G  LLK+ VS+           D   T EEAL  FAKLLS++ KLR
Sbjct:  184 CYSTAAAPIYFPPHHFVTHTSN-GATYEFNLVDGGVATVGDPALLSLS-VATRLAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAEEAAKWGPLRWMLA-----IQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSK-----------DSPETYEEALKRFAKLLSDRKKLR 380          
BLAST of CF832467 vs. ExPASy Swiss-Prot
Match: PAT11_SOLTU (Patatin-11 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.157e-33
Identity = 87/215 (40.47%), Postives = 128/215 (59.53%), Query Frame = -2
Query:  162 CISTFAAPTYLPPHYLETKDSDSGGTRTFDLVDGGVAA-NNPTLLAISHISKEMVKQNPQFRDKNPMDGRDMLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDGNTPILDIYSDGGSDIVDFHMSALFQSCGSKDNYLRIQDDTLSGDAASADIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKLR 800
            C ST AAP Y PPH+  T  S+ G T  F+LVDGGVA   +P LL++S ++  + +++P F     +D + ML+LSLGTGT  + +  Y A +A+KWG   W+       I  + +   S + D+++S +FQ+  S++NYLR+Q++ L+G     D A+E NM+ LV+ G  LLK+ VS+           D   T EEAL  FAKLLS++ KLR
Sbjct:  185 CYSTAAAPIYFPPHHFVTHTSN-GATYEFNLVDGGVATVGDPALLSLS-VATRLAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAEEAAKWGPLRWMLA-----IQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALNGTTTEMDDASEANMELLVQVGETLLKKPVSK-----------DSPETYEEALKRFAKLLSDRKKLR 381          
BLAST of CF832467 vs. ExPASy Swiss-Prot
Match: PAT04_SOLTU (Patatin-04/09 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.157e-33
Identity = 87/215 (40.47%), Postives = 128/215 (59.53%), Query Frame = -2
Query:  162 CISTFAAPTYLPPHYLETKDSDSGGTRTFDLVDGGVAA-NNPTLLAISHISKEMVKQNPQFRDKNPMDGRDMLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDGNTPILDIYSDGGSDIVDFHMSALFQSCGSKDNYLRIQDDTLSGDAASADIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKLR 800
            C ST AAP Y PPH+  T  S+ G T  F+LVDGGVA   +P LL++S ++  + +++P F     +D + ML+LSLGTGT  + +  Y A +A+KWG   W+       I  + +   S + D+++S +FQ+  S++NYLR+Q++ L+G     D A+E NM+ LV+ G  LLK+ VS+           D   T EEAL  FAKLLS++ KLR
Sbjct:  184 CYSTAAAPIYFPPHHFVTHTSN-GATYEFNLVDGGVATVGDPALLSLS-VATRLAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAEEAAKWGPLRWMLA-----IQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALNGTTTEMDDASEANMELLVQVGETLLKKPVSK-----------DSPETYEEALKRFAKLLSDRKKLR 380          
BLAST of CF832467 vs. ExPASy Swiss-Prot
Match: PATJ1_SOLTU (Patatin group J-1 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.974e-33
Identity = 87/215 (40.47%), Postives = 127/215 (59.07%), Query Frame = -2
Query:  162 CISTFAAPTYLPPHYLETKDSDSGGTRTFDLVDGGVAA-NNPTLLAISHISKEMVKQNPQFRDKNPMDGRDMLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDGNTPILDIYSDGGSDIVDFHMSALFQSCGSKDNYLRIQDDTLSGDAASADIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKLR 800
            C ST AAP Y PPH+  T  S+ G T  F+LVDGGVA   +P LL++S ++  + +++P F     +D + ML+LSLGTGT  + +  Y A +A+KWG   W+       I  + +   S + D+++S +FQ+  S++NYLR+Q++ L+G     D A+E NM+ LV+ G  LLK+ VS+           D   T EEAL  FAKLLS + KLR
Sbjct:  185 CYSTAAAPIYFPPHHFVTHTSN-GATYEFNLVDGGVATVGDPALLSLS-VATRLAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAEEAAKWGPLRWMLA-----IQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSK-----------DSPETYEEALKRFAKLLSNRKKLR 381          
BLAST of CF832467 vs. ExPASy Swiss-Prot
Match: PAT06_SOLTU (Patatin-06 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.974e-33
Identity = 87/215 (40.47%), Postives = 127/215 (59.07%), Query Frame = -2
Query:  162 CISTFAAPTYLPPHYLETKDSDSGGTRTFDLVDGGVAA-NNPTLLAISHISKEMVKQNPQFRDKNPMDGRDMLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDGNTPILDIYSDGGSDIVDFHMSALFQSCGSKDNYLRIQDDTLSGDAASADIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKLR 800
            C ST AAP Y PPH+  T  S+ G T  F+LVDGGVA   +P LL++S ++  + +++P F     +D + ML+LSLGTGT  + +  Y A +A+KWG   W+       I  + +   S + D+++S +FQ+  S++NYLR+Q++ L+G     D A+E NM+ LV+ G  LLK+ VS+           D   T EEAL  FAKLLS + KLR
Sbjct:  184 CYSTAAAPIYFPPHHFVTHTSN-GATYEFNLVDGGVATVGDPALLSLS-VATRLAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAEEAAKWGPLRWMLA-----IQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSK-----------DSPETYEEALKRFAKLLSNRKKLR 380          
BLAST of CF832467 vs. ExPASy Swiss-Prot
Match: PT2K2_SOLTU (Patatin-2-Kuras 2 OS=Solanum tuberosum GN=pat2-k2 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.578e-33
Identity = 87/215 (40.47%), Postives = 126/215 (58.60%), Query Frame = -2
Query:  162 CISTFAAPTYLPPHYLETKDSDSGGTRTFDLVDGGVAA-NNPTLLAISHISKEMVKQNPQFRDKNPMDGRDMLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDGNTPILDIYSDGGSDIVDFHMSALFQSCGSKDNYLRIQDDTLSGDAASADIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKLR 800
            C ST AAP Y PPHY  T  SD G    F+LVDG VA   +P LL++S ++  + +++P F     +D + ML+LSLGTGT  + +  Y A +A+KWG   W+       I  + +   S + D+++S +FQ+  S++NYLR+Q++ L+G     D A+E NM+ LV+ G  LLK+ VS+           D   T EEAL  FAKLLS++ KLR
Sbjct:  184 CYSTAAAPMYFPPHYFITHTSD-GDIYEFNLVDGAVATVGDPALLSLS-VATRLAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAEEAAKWGPLRWLLA-----IQQMTNAASSYMTDYYISTVFQAHHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSK-----------DSPETYEEALKRFAKLLSDRKKLR 380          
BLAST of CF832467 vs. ExPASy Swiss-Prot
Match: PATM3_SOLTU (Patatin group M-3 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.578e-33
Identity = 87/215 (40.47%), Postives = 127/215 (59.07%), Query Frame = -2
Query:  162 CISTFAAPTYLPPHYLETKDSDSGGTRTFDLVDGGVAA-NNPTLLAISHISKEMVKQNPQFRDKNPMDGRDMLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDGNTPILDIYSDGGSDIVDFHMSALFQSCGSKDNYLRIQDDTLSGDAASADIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKLR 800
            C ST AAP Y PPHY  T  S+ G    F+LVDGGVA   +P LL++S ++  + +++P F     +D + ML+LSLGTGT  + +  Y A +A+KWG   W+       I  + +   S + D+++S +FQ+  S++NYLR+Q++ L+G     D A+E NM+ LV+ G  LLK+ VS+           D   T EEAL  FAKLLS++ KLR
Sbjct:  184 CYSTAAAPIYFPPHYFITHTSN-GDIYEFNLVDGGVATVGDPALLSLS-VATRLAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAQEAAKWGPLRWMLA-----IQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSK-----------DSPETYEEALKRFAKLLSDRKKLR 380          
The following BLAST results are available for this feature:
BLAST of CF832467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
PT3K1_SOLTU3.254e-3642.52Patatin-3-Kuras 1 OS=Solanum tuberosum GN=pat3-k1 ... [more]
PT2K3_SOLTU6.784e-3440.93Patatin-2-Kuras 3 OS=Solanum tuberosum GN=pat2-k3 ... [more]
PATT5_SOLTU1.157e-3340.93Patatin-T5 OS=Solanum tuberosum PE=1 SV=1[more]
PAT15_SOLTU1.157e-3340.47Patatin-15 OS=Solanum tuberosum PE=2 SV=1[more]
PAT11_SOLTU1.157e-3340.47Patatin-11 OS=Solanum tuberosum PE=2 SV=1[more]
PAT04_SOLTU1.157e-3340.47Patatin-04/09 OS=Solanum tuberosum PE=2 SV=1[more]
PATJ1_SOLTU1.974e-3340.47Patatin group J-1 OS=Solanum tuberosum PE=2 SV=1[more]
PAT06_SOLTU1.974e-3340.47Patatin-06 OS=Solanum tuberosum PE=2 SV=1[more]
PT2K2_SOLTU2.578e-3340.47Patatin-2-Kuras 2 OS=Solanum tuberosum GN=pat2-k2 ... [more]
PATM3_SOLTU2.578e-3340.47Patatin group M-3 OS=Solanum tuberosum PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01O12_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01O12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832467 ID=CF832467; Name=CF832467; organism=Citrus sinensis; type=EST; length=801bp
TTTTTTTTTTTTTTTATTTAATAGTAATAATCTTATTAATTCCCCCTTTC
CAATTGGAAGCACTTTTGAGTCGGATTGATTACACCTAAAAACACGCATG
CGGAATCCTTATGCCTTACTCAAATAAAACGAGTTTCAAATTAAAAGACT
TATTGGCGGCGGCGGAGCTTAAGTTGTTCAGAGAGTAATTTGGCAAAGTG
AGCAAGTGCTTCTTCATTTGTGACCTCTCCGTCAACCTTCTCATATCTGC
CAGTCTCCAGGTTCACCCTCGACACCTGCTCCTTCAACAACTTGGTTCCA
GTTTCCACAAGCCTTTGCATATTCTCCTCCGTGGCAATGTCAGCAGATGC
TGCATCACCACTCAACGTGTCGTCCTGAATTCGAAGGTAGTTGTCCTTGC
TTCCGCAGGATTGAAAGAGAGCAGACATATGGAAATCAACAATATCGGAG
CCTCCATCAGAGTAGATGTCGAGTATTGGGGTATTGCCATCTTCATAGAT
CCATTCGAAAATGCCCCACTTGGAGGCTTTGGCTGCATTGTACTTCAATT
CTTTCTTGGCTGTACCTGTGCCTAGTGATAGTACCAGCATATCTCTACCG
TCCATTGGGTTTTTGTCCCTGAACTGGGGGTTCTGCTTCACCATTTCCTT
CGATATGTGGCTTATTGCCAATAGGGTAGGGTTATTGGCAGCAACTCCGC
CATCAACAAGATCAAAAGTGCGGGTTCCGCCACTGTCACTGTCCTTAGTC
TCCAAGTAATGAGGTGGGAGGTAAGTGGGCGCTGCAAAAGTGCTGATGCA
T
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